EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000006428 (Gene tree)
Gene ID: 101169625
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 22571 bases
Position: chr12:10428101-10450671
Accession: 101169625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000008076	AF-4	PF05110.13	1.4e-141	1	3
ENSORLP00000008076	AF-4	PF05110.13	1.4e-141	2	3
ENSORLP00000008076	AF-4	PF05110.13	1.4e-141	3	3
ENSORLP00000008072	AF-4	PF05110.13	7.2e-119	1	2
ENSORLP00000008072	AF-4	PF05110.13	7.2e-119	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000008073	-	3543	-	ENSORLP00000008072	805 (aa)	-	H2LPT6
ENSORLT00000008077	-	2918	XM_023960789	ENSORLP00000008076	773 (aa)	XP_023816557	H2LPU0

Gene Model

Click here to download ENSORLG00000006428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006428's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006428	-	99	64.835	ENSAPOG00000002994	-	72	64.835	Acanthochromis_polyacanthus
ENSORLG00000006428	-	59	64.789	ENSACIG00000021066	-	56	63.158	Amphilophus_citrinellus
ENSORLG00000006428	-	99	73.494	ENSAOCG00000020283	-	71	73.494	Amphiprion_ocellaris
ENSORLG00000006428	-	99	71.084	ENSAPEG00000018794	-	71	71.084	Amphiprion_percula
ENSORLG00000006428	-	99	67.073	ENSATEG00000015552	-	70	67.073	Anabas_testudineus
ENSORLG00000006428	-	99	59.756	ENSACLG00000002905	-	73	59.756	Astatotilapia_calliptera
ENSORLG00000006428	-	99	59.259	ENSCVAG00000015626	-	70	65.432	Cyprinodon_variegatus
ENSORLG00000006428	-	55	58.929	ENSDORG00000007294	Aff3	55	58.929	Dipodomys_ordii
ENSORLG00000006428	-	89	50.000	ENSELUG00000019953	-	80	50.000	Esox_lucius
ENSORLG00000006428	-	88	67.073	ENSFHEG00000003521	-	81	67.073	Fundulus_heteroclitus
ENSORLG00000006428	-	99	67.123	ENSGACG00000016333	-	74	66.265	Gasterosteus_aculeatus
ENSORLG00000006428	-	99	59.756	ENSHBUG00000005828	-	70	59.756	Haplochromis_burtoni
ENSORLG00000006428	-	98	72.857	ENSHCOG00000000539	-	70	72.857	Hippocampus_comes
ENSORLG00000006428	-	99	75.342	ENSKMAG00000013113	-	71	77.465	Kryptolebias_marmoratus
ENSORLG00000006428	-	99	62.195	ENSLBEG00000016928	-	72	62.195	Labrus_bergylta
ENSORLG00000006428	-	98	62.500	ENSLACG00000007303	AFF1	79	62.295	Latimeria_chalumnae
ENSORLG00000006428	-	81	42.520	ENSLOCG00000004025	AFF1	71	31.663	Lepisosteus_oculatus
ENSORLG00000006428	-	99	63.636	ENSMAMG00000016189	-	69	63.636	Mastacembelus_armatus
ENSORLG00000006428	-	99	59.756	ENSMZEG00005020442	-	70	59.756	Maylandia_zebra
ENSORLG00000006428	-	99	64.835	ENSMALG00000002436	-	70	69.512	Monopterus_albus
ENSORLG00000006428	-	93	59.756	ENSONIG00000007636	-	71	59.756	Oreochromis_niloticus
ENSORLG00000006428	-	99	98.446	ENSORLG00020003991	-	83	98.446	Oryzias_latipes_hni
ENSORLG00000006428	-	99	98.316	ENSORLG00015009287	-	83	98.316	Oryzias_latipes_hsok
ENSORLG00000006428	-	99	80.563	ENSOMEG00000005799	-	84	80.818	Oryzias_melastigma
ENSORLG00000006428	-	99	64.634	ENSPFOG00000004581	-	71	64.634	Poecilia_formosa
ENSORLG00000006428	-	99	41.276	ENSPLAG00000012910	-	77	41.516	Poecilia_latipinna
ENSORLG00000006428	-	66	38.318	ENSPMEG00000020100	-	70	39.366	Poecilia_mexicana
ENSORLG00000006428	-	99	67.073	ENSPREG00000003514	-	70	67.073	Poecilia_reticulata
ENSORLG00000006428	-	99	66.667	ENSSMAG00000007062	-	69	66.667	Scophthalmus_maximus
ENSORLG00000006428	-	68	42.857	ENSSDUG00000023775	-	79	42.784	Seriola_dumerili
ENSORLG00000006428	-	99	62.637	ENSSLDG00000006836	-	71	62.637	Seriola_lalandi_dorsalis
ENSORLG00000006428	-	99	54.887	ENSSPAG00000003972	-	76	54.887	Stegastes_partitus
ENSORLG00000006428	-	99	78.261	ENSTRUG00000014005	-	70	78.261	Takifugu_rubripes
ENSORLG00000006428	-	99	63.889	ENSTNIG00000007537	-	72	63.889	Tetraodon_nigroviridis
ENSORLG00000006428	-	99	65.854	ENSXMAG00000004657	-	71	65.854	Xiphophorus_maculatus