EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000006430 (Gene tree)
Gene ID: 101159934
Gene Symbol: srprb
Alias: -
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7065 bases
Position: chr13:13915364-13922428
Accession: 101159934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000042962	MMR_HSR1	PF01926.23	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000035079	-	4096	XM_023961657	ENSORLP00000042962	274 (aa)	XP_023817425	UPI000CE25E04
ENSORLT00000008074	-	831	-	ENSORLP00000008073	276 (aa)	-	H2LPT7

Gene Model

Click here to download ENSORLG00000006430's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006430	srprb	99	81.685	ENSAPOG00000021219	srprb	99	81.685	Acanthochromis_polyacanthus
ENSORLG00000006430	srprb	97	80.827	ENSACIG00000014621	srprb	100	80.827	Amphilophus_citrinellus
ENSORLG00000006430	srprb	99	82.051	ENSAOCG00000017265	srprb	99	82.051	Amphiprion_ocellaris
ENSORLG00000006430	srprb	99	82.051	ENSAPEG00000024541	srprb	87	82.051	Amphiprion_percula
ENSORLG00000006430	srprb	99	81.550	ENSATEG00000014016	srprb	99	81.550	Anabas_testudineus
ENSORLG00000006430	srprb	99	80.220	ENSACLG00000016748	srprb	99	80.220	Astatotilapia_calliptera
ENSORLG00000006430	srprb	100	67.518	ENSAMXG00000044118	srprb	100	67.518	Astyanax_mexicanus
ENSORLG00000006430	srprb	99	77.491	ENSCSEG00000017194	srprb	99	77.491	Cynoglossus_semilaevis
ENSORLG00000006430	srprb	97	82.331	ENSCVAG00000004221	srprb	100	82.331	Cyprinodon_variegatus
ENSORLG00000006430	srprb	97	66.917	ENSDARG00000030949	srprb	100	66.917	Danio_rerio
ENSORLG00000006430	srprb	96	75.665	ENSELUG00000009740	srprb	97	75.665	Esox_lucius
ENSORLG00000006430	srprb	97	82.331	ENSFHEG00000006004	srprb	100	82.331	Fundulus_heteroclitus
ENSORLG00000006430	srprb	99	77.860	ENSGMOG00000002081	srprb	100	77.860	Gadus_morhua
ENSORLG00000006430	srprb	96	81.369	ENSGAFG00000012593	srprb	99	81.369	Gambusia_affinis
ENSORLG00000006430	srprb	99	81.919	ENSGACG00000009891	srprb	100	81.919	Gasterosteus_aculeatus
ENSORLG00000006430	srprb	99	80.220	ENSHBUG00000002145	srprb	99	80.220	Haplochromis_burtoni
ENSORLG00000006430	srprb	99	78.519	ENSHCOG00000007732	srprb	100	78.519	Hippocampus_comes
ENSORLG00000006430	srprb	100	64.964	ENSIPUG00000004177	srprb	100	64.964	Ictalurus_punctatus
ENSORLG00000006430	srprb	97	80.827	ENSKMAG00000020736	srprb	100	80.827	Kryptolebias_marmoratus
ENSORLG00000006430	srprb	99	81.181	ENSLBEG00000021483	srprb	99	81.181	Labrus_bergylta
ENSORLG00000006430	srprb	99	66.423	ENSLOCG00000009740	srprb	89	66.788	Lepisosteus_oculatus
ENSORLG00000006430	srprb	99	83.395	ENSMAMG00000011876	srprb	99	83.395	Mastacembelus_armatus
ENSORLG00000006430	srprb	94	81.467	ENSMZEG00005016621	srprb	100	81.467	Maylandia_zebra
ENSORLG00000006430	srprb	98	82.836	ENSMMOG00000012550	srprb	99	82.836	Mola_mola
ENSORLG00000006430	srprb	99	83.395	ENSMALG00000012595	srprb	99	83.395	Monopterus_albus
ENSORLG00000006430	srprb	74	82.266	ENSNBRG00000004699	srprb	94	77.130	Neolamprologus_brichardi
ENSORLG00000006430	srprb	99	79.779	ENSONIG00000003788	srprb	81	79.779	Oreochromis_niloticus
ENSORLG00000006430	srprb	99	98.901	ENSORLG00020003413	srprb	99	98.901	Oryzias_latipes_hni
ENSORLG00000006430	srprb	99	99.634	ENSORLG00015000166	srprb	99	99.634	Oryzias_latipes_hsok
ENSORLG00000006430	srprb	99	94.505	ENSOMEG00000012735	srprb	99	94.505	Oryzias_melastigma
ENSORLG00000006430	srprb	91	70.120	ENSPKIG00000013147	srprb	95	70.120	Paramormyrops_kingsleyae
ENSORLG00000006430	srprb	100	76.277	ENSPMGG00000014061	srprb	100	76.277	Periophthalmus_magnuspinnatus
ENSORLG00000006430	srprb	96	80.989	ENSPFOG00000011347	srprb	95	80.989	Poecilia_formosa
ENSORLG00000006430	srprb	94	81.783	ENSPLAG00000001156	srprb	100	81.783	Poecilia_latipinna
ENSORLG00000006430	srprb	94	81.008	ENSPMEG00000012169	srprb	100	81.008	Poecilia_mexicana
ENSORLG00000006430	srprb	94	80.233	ENSPREG00000001449	srprb	100	80.233	Poecilia_reticulata
ENSORLG00000006430	srprb	99	80.220	ENSPNYG00000005911	srprb	99	80.220	Pundamilia_nyererei
ENSORLG00000006430	srprb	97	69.173	ENSPNAG00000009983	srprb	100	69.173	Pygocentrus_nattereri
ENSORLG00000006430	srprb	92	71.146	ENSSFOG00015019355	srprb	94	71.146	Scleropages_formosus
ENSORLG00000006430	srprb	99	80.443	ENSSMAG00000013202	srprb	99	80.443	Scophthalmus_maximus
ENSORLG00000006430	srprb	99	82.288	ENSSDUG00000018746	srprb	92	82.288	Seriola_dumerili
ENSORLG00000006430	srprb	99	81.919	ENSSLDG00000020560	srprb	99	81.919	Seriola_lalandi_dorsalis
ENSORLG00000006430	srprb	98	82.657	ENSSPAG00000008898	srprb	98	82.657	Stegastes_partitus
ENSORLG00000006430	srprb	99	79.705	ENSTRUG00000022463	srprb	99	79.705	Takifugu_rubripes
ENSORLG00000006430	srprb	95	80.695	ENSTNIG00000007725	srprb	99	80.695	Tetraodon_nigroviridis
ENSORLG00000006430	srprb	94	82.558	ENSXCOG00000012585	srprb	100	82.558	Xiphophorus_couchianus
ENSORLG00000006430	srprb	94	82.946	ENSXMAG00000028725	srprb	100	82.946	Xiphophorus_maculatus