EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000006487 (Gene tree)
Gene ID: 101160430
Gene Symbol: gfm1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 10409 bases
Position: chr13:13928062-13938470
Accession: 101160430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000008145	GTP_EFTU	PF00009.27	1.9e-62	1	1
ENSORLP00000008145	GTP_EFTU_D2	PF03144.25	1.2e-16	1	1
ENSORLP00000008145	EFG_IV	PF03764.18	7.6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000008146	-	2127	XM_023961606	ENSORLP00000008145	708 (aa)	XP_023817374	H2LQ09

Gene Model

Click here to download ENSORLG00000006487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000006487	gfm1	78	39.597	ENSORLG00000015009	eef2b	74	39.597
ENSORLG00000006487	gfm1	51	35.870	ENSORLG00000009541	guf1	57	39.474
ENSORLG00000006487	gfm1	77	38.926	ENSORLG00000004622	-	72	38.926
ENSORLG00000006487	gfm1	97	33.196	ENSORLG00000003360	gfm2	93	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006487	gfm1	100	81.523	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSORLG00000006487	gfm1	93	88.737	ENSAPOG00000016489	gfm1	94	88.737	Acanthochromis_polyacanthus
ENSORLG00000006487	gfm1	100	82.370	ENSAMEG00000013542	GFM1	94	82.370	Ailuropoda_melanoleuca
ENSORLG00000006487	gfm1	100	85.896	ENSACIG00000014465	gfm1	92	85.896	Amphilophus_citrinellus
ENSORLG00000006487	gfm1	100	88.983	ENSAOCG00000006023	gfm1	95	88.983	Amphiprion_ocellaris
ENSORLG00000006487	gfm1	100	88.842	ENSAPEG00000024499	gfm1	98	88.418	Amphiprion_percula
ENSORLG00000006487	gfm1	100	89.266	ENSATEG00000013789	gfm1	95	89.266	Anabas_testudineus
ENSORLG00000006487	gfm1	100	81.241	ENSAPLG00000005022	GFM1	98	81.241	Anas_platyrhynchos
ENSORLG00000006487	gfm1	100	81.921	ENSACAG00000006829	GFM1	96	81.921	Anolis_carolinensis
ENSORLG00000006487	gfm1	100	81.100	ENSANAG00000035983	GFM1	94	81.100	Aotus_nancymaae
ENSORLG00000006487	gfm1	100	91.384	ENSACLG00000016586	gfm1	97	89.859	Astatotilapia_calliptera
ENSORLG00000006487	gfm1	100	86.441	ENSAMXG00000013435	gfm1	95	86.299	Astyanax_mexicanus
ENSORLG00000006487	gfm1	100	81.497	ENSBTAG00000027795	GFM1	94	81.497	Bos_taurus
ENSORLG00000006487	gfm1	98	57.040	WBGene00009246	gfm-1	94	56.719	Caenorhabditis_elegans
ENSORLG00000006487	gfm1	100	81.664	ENSCJAG00000000363	GFM1	94	81.664	Callithrix_jacchus
ENSORLG00000006487	gfm1	100	82.228	ENSCAFG00000009006	GFM1	100	81.805	Canis_familiaris
ENSORLG00000006487	gfm1	100	82.228	ENSCAFG00020005878	GFM1	97	82.228	Canis_lupus_dingo
ENSORLG00000006487	gfm1	100	81.638	ENSCHIG00000015220	GFM1	94	81.638	Capra_hircus
ENSORLG00000006487	gfm1	100	82.087	ENSTSYG00000002013	GFM1	94	82.087	Carlito_syrichta
ENSORLG00000006487	gfm1	100	71.429	ENSCAPG00000005699	GFM1	96	71.429	Cavia_aperea
ENSORLG00000006487	gfm1	100	81.946	ENSCPOG00000001194	GFM1	94	81.946	Cavia_porcellus
ENSORLG00000006487	gfm1	100	81.382	ENSCCAG00000025561	GFM1	94	81.382	Cebus_capucinus
ENSORLG00000006487	gfm1	100	81.805	ENSCATG00000037622	GFM1	94	81.805	Cercocebus_atys
ENSORLG00000006487	gfm1	100	80.959	ENSCLAG00000002503	GFM1	94	80.959	Chinchilla_lanigera
ENSORLG00000006487	gfm1	100	81.805	ENSCSAG00000012162	GFM1	94	81.805	Chlorocebus_sabaeus
ENSORLG00000006487	gfm1	100	72.920	ENSCHOG00000004867	GFM1	94	72.920	Choloepus_hoffmanni
ENSORLG00000006487	gfm1	100	82.768	ENSCPBG00000018367	GFM1	95	82.768	Chrysemys_picta_bellii
ENSORLG00000006487	gfm1	99	59.551	ENSCING00000011960	-	92	59.551	Ciona_intestinalis
ENSORLG00000006487	gfm1	99	59.659	ENSCSAVG00000008514	-	100	57.880	Ciona_savignyi
ENSORLG00000006487	gfm1	100	81.664	ENSCANG00000031714	GFM1	94	81.664	Colobus_angolensis_palliatus
ENSORLG00000006487	gfm1	100	81.921	ENSCGRG00001022095	GFM1	94	81.921	Cricetulus_griseus_chok1gshd
ENSORLG00000006487	gfm1	100	81.921	ENSCGRG00000012043	GFM1	94	81.921	Cricetulus_griseus_crigri
ENSORLG00000006487	gfm1	100	83.051	ENSCSEG00000017088	gfm1	97	83.051	Cynoglossus_semilaevis
ENSORLG00000006487	gfm1	100	92.232	ENSCVAG00000004126	gfm1	99	90.254	Cyprinodon_variegatus
ENSORLG00000006487	gfm1	100	84.463	ENSDARG00000063624	gfm1	95	84.463	Danio_rerio
ENSORLG00000006487	gfm1	58	79.218	ENSDNOG00000016385	-	100	79.218	Dasypus_novemcinctus
ENSORLG00000006487	gfm1	100	80.818	ENSDORG00000014165	Gfm1	94	80.818	Dipodomys_ordii
ENSORLG00000006487	gfm1	99	68.458	FBgn0263133	mEFG1	95	68.458	Drosophila_melanogaster
ENSORLG00000006487	gfm1	100	73.980	ENSETEG00000019197	GFM1	94	73.980	Echinops_telfairi
ENSORLG00000006487	gfm1	94	63.459	ENSEBUG00000012794	gfm1	99	63.459	Eptatretus_burgeri
ENSORLG00000006487	gfm1	100	60.759	ENSEEUG00000000429	GFM1	98	60.759	Erinaceus_europaeus
ENSORLG00000006487	gfm1	100	88.277	ENSELUG00000014728	gfm1	95	88.277	Esox_lucius
ENSORLG00000006487	gfm1	100	82.370	ENSFCAG00000013291	GFM1	94	82.370	Felis_catus
ENSORLG00000006487	gfm1	95	80.889	ENSFALG00000007619	GFM1	100	80.889	Ficedula_albicollis
ENSORLG00000006487	gfm1	100	81.241	ENSFDAG00000016559	GFM1	94	81.241	Fukomys_damarensis
ENSORLG00000006487	gfm1	100	90.678	ENSFHEG00000006091	gfm1	95	90.678	Fundulus_heteroclitus
ENSORLG00000006487	gfm1	100	86.517	ENSGMOG00000010161	gfm1	98	86.517	Gadus_morhua
ENSORLG00000006487	gfm1	100	81.497	ENSGALG00000009634	GFM1	96	81.497	Gallus_gallus
ENSORLG00000006487	gfm1	100	91.243	ENSGAFG00000012527	gfm1	95	91.243	Gambusia_affinis
ENSORLG00000006487	gfm1	99	89.548	ENSGACG00000009864	gfm1	95	89.548	Gasterosteus_aculeatus
ENSORLG00000006487	gfm1	100	81.805	ENSGGOG00000003085	GFM1	94	81.805	Gorilla_gorilla
ENSORLG00000006487	gfm1	100	91.525	ENSHBUG00000002120	gfm1	95	91.525	Haplochromis_burtoni
ENSORLG00000006487	gfm1	100	80.677	ENSHGLG00000016855	GFM1	94	80.677	Heterocephalus_glaber_female
ENSORLG00000006487	gfm1	100	80.677	ENSHGLG00100013049	GFM1	94	80.677	Heterocephalus_glaber_male
ENSORLG00000006487	gfm1	100	89.831	ENSHCOG00000007638	gfm1	95	89.831	Hippocampus_comes
ENSORLG00000006487	gfm1	100	86.441	ENSIPUG00000005873	gfm1	95	86.441	Ictalurus_punctatus
ENSORLG00000006487	gfm1	100	79.690	ENSSTOG00000010150	GFM1	96	79.690	Ictidomys_tridecemlineatus
ENSORLG00000006487	gfm1	100	81.215	ENSJJAG00000016447	Gfm1	94	81.215	Jaculus_jaculus
ENSORLG00000006487	gfm1	100	88.136	ENSKMAG00000020768	gfm1	95	88.136	Kryptolebias_marmoratus
ENSORLG00000006487	gfm1	99	90.442	ENSLBEG00000021315	gfm1	100	90.442	Labrus_bergylta
ENSORLG00000006487	gfm1	100	81.356	ENSLACG00000012295	GFM1	96	81.356	Latimeria_chalumnae
ENSORLG00000006487	gfm1	100	79.635	ENSLOCG00000003778	gfm1	97	79.635	Lepisosteus_oculatus
ENSORLG00000006487	gfm1	100	79.549	ENSLAFG00000010945	GFM1	98	78.279	Loxodonta_africana
ENSORLG00000006487	gfm1	100	81.664	ENSMFAG00000035731	GFM1	94	81.664	Macaca_fascicularis
ENSORLG00000006487	gfm1	100	81.664	ENSMMUG00000004961	GFM1	94	81.664	Macaca_mulatta
ENSORLG00000006487	gfm1	100	81.523	ENSMNEG00000033245	GFM1	94	81.523	Macaca_nemestrina
ENSORLG00000006487	gfm1	100	79.831	ENSMLEG00000030908	GFM1	98	79.396	Mandrillus_leucophaeus
ENSORLG00000006487	gfm1	100	89.689	ENSMAMG00000011760	gfm1	95	89.689	Mastacembelus_armatus
ENSORLG00000006487	gfm1	100	91.525	ENSMZEG00005016639	gfm1	95	91.525	Maylandia_zebra
ENSORLG00000006487	gfm1	100	81.780	ENSMGAG00000010641	GFM1	95	81.780	Meleagris_gallopavo
ENSORLG00000006487	gfm1	100	82.062	ENSMAUG00000000611	Gfm1	94	82.062	Mesocricetus_auratus
ENSORLG00000006487	gfm1	100	81.805	ENSMICG00000049086	GFM1	94	81.805	Microcebus_murinus
ENSORLG00000006487	gfm1	100	82.203	ENSMOCG00000000465	Gfm1	94	82.203	Microtus_ochrogaster
ENSORLG00000006487	gfm1	100	89.831	ENSMMOG00000012538	gfm1	96	89.831	Mola_mola
ENSORLG00000006487	gfm1	100	81.497	ENSMODG00000015673	GFM1	95	81.497	Monodelphis_domestica
ENSORLG00000006487	gfm1	100	88.418	ENSMALG00000012508	gfm1	94	88.418	Monopterus_albus
ENSORLG00000006487	gfm1	100	81.921	MGP_CAROLIEiJ_G0025052	Gfm1	94	81.921	Mus_caroli
ENSORLG00000006487	gfm1	100	81.780	ENSMUSG00000027774	Gfm1	94	81.780	Mus_musculus
ENSORLG00000006487	gfm1	100	81.497	MGP_PahariEiJ_G0026495	Gfm1	92	83.673	Mus_pahari
ENSORLG00000006487	gfm1	100	81.780	MGP_SPRETEiJ_G0025994	Gfm1	94	81.780	Mus_spretus
ENSORLG00000006487	gfm1	100	82.370	ENSMPUG00000002859	GFM1	94	82.370	Mustela_putorius_furo
ENSORLG00000006487	gfm1	100	82.370	ENSMLUG00000000452	GFM1	94	82.370	Myotis_lucifugus
ENSORLG00000006487	gfm1	100	81.780	ENSNGAG00000012375	Gfm1	94	81.780	Nannospalax_galili
ENSORLG00000006487	gfm1	100	91.384	ENSNBRG00000004631	gfm1	97	91.384	Neolamprologus_brichardi
ENSORLG00000006487	gfm1	100	81.805	ENSNLEG00000004176	GFM1	94	81.805	Nomascus_leucogenys
ENSORLG00000006487	gfm1	94	72.496	ENSMEUG00000007784	GFM1	98	72.496	Notamacropus_eugenii
ENSORLG00000006487	gfm1	100	81.523	ENSOPRG00000009860	GFM1	96	81.523	Ochotona_princeps
ENSORLG00000006487	gfm1	100	82.228	ENSODEG00000004316	GFM1	94	82.228	Octodon_degus
ENSORLG00000006487	gfm1	100	91.525	ENSONIG00000003772	gfm1	95	91.525	Oreochromis_niloticus
ENSORLG00000006487	gfm1	100	82.652	ENSOCUG00000013561	GFM1	94	82.652	Oryctolagus_cuniculus
ENSORLG00000006487	gfm1	100	99.435	ENSORLG00020003362	gfm1	95	99.435	Oryzias_latipes_hni
ENSORLG00000006487	gfm1	100	99.294	ENSORLG00015005829	gfm1	95	99.294	Oryzias_latipes_hsok
ENSORLG00000006487	gfm1	100	95.198	ENSOMEG00000012894	gfm1	95	95.198	Oryzias_melastigma
ENSORLG00000006487	gfm1	100	80.959	ENSOGAG00000008298	GFM1	94	80.959	Otolemur_garnettii
ENSORLG00000006487	gfm1	100	80.872	ENSOARG00000002409	GFM1	98	80.872	Ovis_aries
ENSORLG00000006487	gfm1	100	81.805	ENSPPAG00000033881	GFM1	94	81.805	Pan_paniscus
ENSORLG00000006487	gfm1	100	82.370	ENSPPRG00000009281	GFM1	94	82.370	Panthera_pardus
ENSORLG00000006487	gfm1	100	82.228	ENSPTIG00000012416	GFM1	94	82.228	Panthera_tigris_altaica
ENSORLG00000006487	gfm1	100	81.805	ENSPTRG00000015570	GFM1	94	81.805	Pan_troglodytes
ENSORLG00000006487	gfm1	100	81.523	ENSPANG00000016512	GFM1	94	81.523	Papio_anubis
ENSORLG00000006487	gfm1	100	84.887	ENSPKIG00000004876	gfm1	95	84.887	Paramormyrops_kingsleyae
ENSORLG00000006487	gfm1	100	82.345	ENSPSIG00000012567	GFM1	95	82.345	Pelodiscus_sinensis
ENSORLG00000006487	gfm1	100	88.028	ENSPMGG00000014068	gfm1	98	88.028	Periophthalmus_magnuspinnatus
ENSORLG00000006487	gfm1	100	82.062	ENSPEMG00000008942	Gfm1	94	82.062	Peromyscus_maniculatus_bairdii
ENSORLG00000006487	gfm1	88	79.260	ENSPCIG00000020195	GFM1	93	81.987	Phascolarctos_cinereus
ENSORLG00000006487	gfm1	100	91.667	ENSPFOG00000011022	gfm1	95	91.667	Poecilia_formosa
ENSORLG00000006487	gfm1	100	91.808	ENSPLAG00000019585	gfm1	94	91.808	Poecilia_latipinna
ENSORLG00000006487	gfm1	100	91.525	ENSPMEG00000012376	gfm1	95	91.525	Poecilia_mexicana
ENSORLG00000006487	gfm1	100	91.667	ENSPREG00000001332	gfm1	90	91.667	Poecilia_reticulata
ENSORLG00000006487	gfm1	100	81.664	ENSPPYG00000014244	GFM1	94	81.664	Pongo_abelii
ENSORLG00000006487	gfm1	99	78.805	ENSPCAG00000008934	GFM1	100	78.805	Procavia_capensis
ENSORLG00000006487	gfm1	100	81.805	ENSPCOG00000022259	GFM1	94	81.805	Propithecus_coquereli
ENSORLG00000006487	gfm1	100	81.100	ENSPVAG00000013605	GFM1	94	81.100	Pteropus_vampyrus
ENSORLG00000006487	gfm1	100	91.243	ENSPNYG00000006037	gfm1	96	91.243	Pundamilia_nyererei
ENSORLG00000006487	gfm1	100	87.147	ENSPNAG00000001237	gfm1	95	87.147	Pygocentrus_nattereri
ENSORLG00000006487	gfm1	100	81.497	ENSRNOG00000012873	Gfm1	94	81.497	Rattus_norvegicus
ENSORLG00000006487	gfm1	100	81.664	ENSRBIG00000031363	GFM1	94	81.664	Rhinopithecus_bieti
ENSORLG00000006487	gfm1	100	81.805	ENSRROG00000031081	GFM1	94	81.805	Rhinopithecus_roxellana
ENSORLG00000006487	gfm1	97	55.476	YLR069C	-	90	55.476	Saccharomyces_cerevisiae
ENSORLG00000006487	gfm1	100	81.382	ENSSBOG00000023252	GFM1	94	81.382	Saimiri_boliviensis_boliviensis
ENSORLG00000006487	gfm1	100	82.486	ENSSHAG00000017772	GFM1	95	82.486	Sarcophilus_harrisii
ENSORLG00000006487	gfm1	100	85.311	ENSSFOG00015003117	gfm1	98	84.951	Scleropages_formosus
ENSORLG00000006487	gfm1	100	89.124	ENSSMAG00000013221	gfm1	95	89.124	Scophthalmus_maximus
ENSORLG00000006487	gfm1	100	90.254	ENSSDUG00000018665	gfm1	95	90.254	Seriola_dumerili
ENSORLG00000006487	gfm1	100	90.113	ENSSLDG00000020606	gfm1	95	90.113	Seriola_lalandi_dorsalis
ENSORLG00000006487	gfm1	100	80.791	ENSSPUG00000018686	GFM1	96	80.791	Sphenodon_punctatus
ENSORLG00000006487	gfm1	100	91.384	ENSSPAG00000008800	gfm1	95	91.384	Stegastes_partitus
ENSORLG00000006487	gfm1	100	81.215	ENSSSCG00000025651	GFM1	94	81.215	Sus_scrofa
ENSORLG00000006487	gfm1	100	87.288	ENSTRUG00000009244	gfm1	95	87.288	Takifugu_rubripes
ENSORLG00000006487	gfm1	100	90.254	ENSTNIG00000007729	gfm1	95	90.254	Tetraodon_nigroviridis
ENSORLG00000006487	gfm1	95	73.185	ENSTBEG00000017404	GFM1	89	73.185	Tupaia_belangeri
ENSORLG00000006487	gfm1	100	81.356	ENSTTRG00000001735	GFM1	94	81.356	Tursiops_truncatus
ENSORLG00000006487	gfm1	100	81.946	ENSUAMG00000026381	GFM1	94	81.946	Ursus_americanus
ENSORLG00000006487	gfm1	100	81.946	ENSUMAG00000011268	GFM1	94	81.946	Ursus_maritimus
ENSORLG00000006487	gfm1	100	78.672	ENSVPAG00000009444	GFM1	94	78.672	Vicugna_pacos
ENSORLG00000006487	gfm1	100	81.946	ENSVVUG00000020091	GFM1	100	81.509	Vulpes_vulpes
ENSORLG00000006487	gfm1	100	84.181	ENSXETG00000032551	GFM1	94	84.181	Xenopus_tropicalis
ENSORLG00000006487	gfm1	53	89.920	ENSXCOG00000012590	gfm1	87	89.920	Xiphophorus_couchianus
ENSORLG00000006487	gfm1	100	91.667	ENSXMAG00000000261	gfm1	95	91.667	Xiphophorus_maculatus