EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000006495 (Gene tree)
Gene ID: 101164290
Gene Symbol: CPSF7
Alias: -
Full Name: cleavage and polyadenylation specific factor 7
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6401 bases
Position: chr3:18856222-18862622
Accession: 101164290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000008155	RRM_1	PF00076.22	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000008156	CPSF7-201	3136	XM_004067024	ENSORLP00000008155	458 (aa)	XP_004067072	H2LQ19

Gene Model

Click here to download ENSORLG00000006495's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000006495	CPSF7	72	40.341	ENSORLG00000013893	cpsf6	69	35.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006495	CPSF7	80	39.506	ENSG00000149532	CPSF7	97	39.437	Homo_sapiens
ENSORLG00000006495	CPSF7	63	43.939	ENSG00000111605	CPSF6	76	35.931	Homo_sapiens
ENSORLG00000006495	CPSF7	60	50.000	ENSAMEG00000016595	CPSF7	59	47.857	Ailuropoda_melanoleuca
ENSORLG00000006495	CPSF7	63	43.939	ENSAMEG00000011781	CPSF6	75	33.523	Ailuropoda_melanoleuca
ENSORLG00000006495	CPSF7	72	40.341	ENSACIG00000018413	cpsf6	63	36.486	Amphilophus_citrinellus
ENSORLG00000006495	CPSF7	72	40.341	ENSAOCG00000017865	cpsf6	79	35.117	Amphiprion_ocellaris
ENSORLG00000006495	CPSF7	84	44.275	ENSACAG00000004381	CPSF6	75	37.143	Anolis_carolinensis
ENSORLG00000006495	CPSF7	59	43.939	ENSANAG00000019240	CPSF6	93	32.102	Aotus_nancymaae
ENSORLG00000006495	CPSF7	69	39.429	ENSACLG00000026325	cpsf6	61	35.776	Astatotilapia_calliptera
ENSORLG00000006495	CPSF7	62	39.645	ENSAMXG00000016745	CPSF6	69	35.417	Astyanax_mexicanus
ENSORLG00000006495	CPSF7	63	43.939	ENSBTAG00000007323	CPSF6	76	35.931	Bos_taurus
ENSORLG00000006495	CPSF7	83	38.140	ENSCJAG00000019282	CPSF7	62	61.842	Callithrix_jacchus
ENSORLG00000006495	CPSF7	59	49.558	ENSCJAG00000001798	CPSF6	76	35.931	Callithrix_jacchus
ENSORLG00000006495	CPSF7	59	43.939	ENSCAFG00000000424	CPSF6	89	31.220	Canis_familiaris
ENSORLG00000006495	CPSF7	63	43.939	ENSCAFG00020016950	CPSF6	76	35.931	Canis_lupus_dingo
ENSORLG00000006495	CPSF7	63	43.939	ENSCHIG00000010792	CPSF6	76	35.931	Capra_hircus
ENSORLG00000006495	CPSF7	55	49.558	ENSTSYG00000008591	CPSF6	72	35.931	Carlito_syrichta
ENSORLG00000006495	CPSF7	63	43.939	ENSCPOG00000015201	CPSF6	76	35.931	Cavia_porcellus
ENSORLG00000006495	CPSF7	59	49.558	ENSCCAG00000028149	CPSF6	76	35.931	Cebus_capucinus
ENSORLG00000006495	CPSF7	63	43.939	ENSCATG00000039288	CPSF6	98	32.582	Cercocebus_atys
ENSORLG00000006495	CPSF7	55	49.558	ENSCLAG00000010149	CPSF6	75	35.931	Chinchilla_lanigera
ENSORLG00000006495	CPSF7	63	43.939	ENSCSAG00000004232	CPSF6	72	35.931	Chlorocebus_sabaeus
ENSORLG00000006495	CPSF7	62	44.615	ENSCPBG00000013322	CPSF6	82	33.333	Chrysemys_picta_bellii
ENSORLG00000006495	CPSF7	59	43.939	ENSCANG00000037294	CPSF6	95	32.759	Colobus_angolensis_palliatus
ENSORLG00000006495	CPSF7	59	49.558	ENSCGRG00001018082	Cpsf6	76	35.193	Cricetulus_griseus_chok1gshd
ENSORLG00000006495	CPSF7	59	49.558	ENSCGRG00000016909	Cpsf6	75	35.193	Cricetulus_griseus_crigri
ENSORLG00000006495	CPSF7	59	48.276	ENSCSEG00000008967	cpsf6	73	34.025	Cynoglossus_semilaevis
ENSORLG00000006495	CPSF7	55	49.123	ENSCVAG00000014857	cpsf6	91	30.787	Cyprinodon_variegatus
ENSORLG00000006495	CPSF7	86	55.138	ENSCVAG00000007392	CPSF7	99	50.424	Cyprinodon_variegatus
ENSORLG00000006495	CPSF7	64	39.881	ENSDARG00000018618	cpsf6	78	37.387	Danio_rerio
ENSORLG00000006495	CPSF7	59	49.558	ENSDNOG00000015292	CPSF6	76	35.193	Dasypus_novemcinctus
ENSORLG00000006495	CPSF7	80	38.647	ENSDNOG00000018517	CPSF7	62	63.158	Dasypus_novemcinctus
ENSORLG00000006495	CPSF7	55	49.558	ENSDORG00000002950	Cpsf6	73	35.193	Dipodomys_ordii
ENSORLG00000006495	CPSF7	57	39.806	ENSETEG00000002097	CPSF6	65	33.333	Echinops_telfairi
ENSORLG00000006495	CPSF7	80	37.923	ENSETEG00000003765	CPSF7	78	41.954	Echinops_telfairi
ENSORLG00000006495	CPSF7	63	43.939	ENSEASG00005008066	CPSF6	76	35.931	Equus_asinus_asinus
ENSORLG00000006495	CPSF7	80	37.433	ENSECAG00000018521	CPSF7	64	63.158	Equus_caballus
ENSORLG00000006495	CPSF7	63	43.939	ENSECAG00000015988	CPSF6	76	35.931	Equus_caballus
ENSORLG00000006495	CPSF7	59	43.939	ENSEEUG00000015039	CPSF6	70	35.931	Erinaceus_europaeus
ENSORLG00000006495	CPSF7	63	43.939	ENSFCAG00000002855	CPSF6	76	35.931	Felis_catus
ENSORLG00000006495	CPSF7	83	38.605	ENSFCAG00000013677	CPSF7	64	63.158	Felis_catus
ENSORLG00000006495	CPSF7	55	49.558	ENSFALG00000010157	CPSF6	71	42.391	Ficedula_albicollis
ENSORLG00000006495	CPSF7	80	37.722	ENSFALG00000011927	CPSF7	68	50.000	Ficedula_albicollis
ENSORLG00000006495	CPSF7	59	43.939	ENSFDAG00000002281	CPSF6	72	35.931	Fukomys_damarensis
ENSORLG00000006495	CPSF7	55	49.123	ENSFHEG00000019693	cpsf6	51	36.095	Fundulus_heteroclitus
ENSORLG00000006495	CPSF7	59	48.276	ENSGACG00000019685	cpsf6	68	35.088	Gasterosteus_aculeatus
ENSORLG00000006495	CPSF7	62	44.615	ENSGAGG00000010228	CPSF6	77	42.391	Gopherus_agassizii
ENSORLG00000006495	CPSF7	59	49.558	ENSGGOG00000008211	CPSF6	98	32.582	Gorilla_gorilla
ENSORLG00000006495	CPSF7	69	39.429	ENSHBUG00000005998	cpsf6	65	35.776	Haplochromis_burtoni
ENSORLG00000006495	CPSF7	63	43.939	ENSHGLG00000000792	CPSF6	76	35.931	Heterocephalus_glaber_female
ENSORLG00000006495	CPSF7	59	43.939	ENSHGLG00100013861	CPSF6	75	35.931	Heterocephalus_glaber_male
ENSORLG00000006495	CPSF7	54	51.852	ENSHCOG00000014555	cpsf6	76	34.505	Hippocampus_comes
ENSORLG00000006495	CPSF7	55	49.558	ENSSTOG00000014133	CPSF6	75	35.931	Ictidomys_tridecemlineatus
ENSORLG00000006495	CPSF7	55	49.558	ENSJJAG00000014647	Cpsf6	74	35.193	Jaculus_jaculus
ENSORLG00000006495	CPSF7	61	38.690	ENSKMAG00000014794	cpsf6	55	37.037	Kryptolebias_marmoratus
ENSORLG00000006495	CPSF7	80	58.871	ENSLBEG00000000947	CPSF7	97	50.200	Labrus_bergylta
ENSORLG00000006495	CPSF7	55	48.649	ENSLBEG00000015762	cpsf6	61	34.934	Labrus_bergylta
ENSORLG00000006495	CPSF7	69	40.606	ENSLACG00000008625	CPSF6	56	38.411	Latimeria_chalumnae
ENSORLG00000006495	CPSF7	79	38.208	ENSLOCG00000016190	cpsf6	53	39.310	Lepisosteus_oculatus
ENSORLG00000006495	CPSF7	63	43.939	ENSLAFG00000030413	CPSF6	92	31.417	Loxodonta_africana
ENSORLG00000006495	CPSF7	59	49.558	ENSMFAG00000045318	CPSF6	98	32.582	Macaca_fascicularis
ENSORLG00000006495	CPSF7	59	49.558	ENSMMUG00000002921	CPSF6	76	35.193	Macaca_mulatta
ENSORLG00000006495	CPSF7	59	49.558	ENSMNEG00000036311	CPSF6	98	32.787	Macaca_nemestrina
ENSORLG00000006495	CPSF7	59	43.939	ENSMLEG00000003957	CPSF6	95	32.759	Mandrillus_leucophaeus
ENSORLG00000006495	CPSF7	72	38.857	ENSMAMG00000010385	cpsf6	68	35.345	Mastacembelus_armatus
ENSORLG00000006495	CPSF7	69	39.429	ENSMZEG00005007975	cpsf6	65	35.776	Maylandia_zebra
ENSORLG00000006495	CPSF7	89	40.936	ENSMGAG00000004876	CPSF7	58	48.905	Meleagris_gallopavo
ENSORLG00000006495	CPSF7	55	49.558	ENSMGAG00000010552	CPSF6	75	35.931	Meleagris_gallopavo
ENSORLG00000006495	CPSF7	63	43.939	ENSMAUG00000013240	Cpsf6	76	35.931	Mesocricetus_auratus
ENSORLG00000006495	CPSF7	59	49.558	ENSMICG00000007385	-	98	32.787	Microcebus_murinus
ENSORLG00000006495	CPSF7	59	49.558	ENSMOCG00000013982	Cpsf6	76	35.193	Microtus_ochrogaster
ENSORLG00000006495	CPSF7	63	43.939	ENSMODG00000007123	CPSF6	76	35.931	Monodelphis_domestica
ENSORLG00000006495	CPSF7	72	40.113	ENSMALG00000014908	cpsf6	74	35.526	Monopterus_albus
ENSORLG00000006495	CPSF7	59	49.558	MGP_CAROLIEiJ_G0015834	Cpsf6	76	35.931	Mus_caroli
ENSORLG00000006495	CPSF7	58	50.450	ENSMUSG00000055531	Cpsf6	76	35.931	Mus_musculus
ENSORLG00000006495	CPSF7	58	50.450	MGP_SPRETEiJ_G0016657	Cpsf6	76	35.931	Mus_spretus
ENSORLG00000006495	CPSF7	59	40.909	ENSMPUG00000017502	CPSF6	72	34.043	Mustela_putorius_furo
ENSORLG00000006495	CPSF7	59	40.909	ENSMLUG00000004172	-	72	34.043	Myotis_lucifugus
ENSORLG00000006495	CPSF7	59	49.558	ENSNGAG00000015901	Cpsf6	76	35.193	Nannospalax_galili
ENSORLG00000006495	CPSF7	72	39.429	ENSNBRG00000004089	cpsf6	68	35.776	Neolamprologus_brichardi
ENSORLG00000006495	CPSF7	59	49.558	ENSNLEG00000003798	CPSF6	98	32.787	Nomascus_leucogenys
ENSORLG00000006495	CPSF7	62	43.651	ENSMEUG00000015041	CPSF6	71	36.410	Notamacropus_eugenii
ENSORLG00000006495	CPSF7	59	43.939	ENSOPRG00000005199	CPSF6	70	35.931	Ochotona_princeps
ENSORLG00000006495	CPSF7	59	49.123	ENSODEG00000018399	-	62	33.939	Octodon_degus
ENSORLG00000006495	CPSF7	80	37.624	ENSONIG00000011702	cpsf6	77	34.084	Oreochromis_niloticus
ENSORLG00000006495	CPSF7	63	43.939	ENSOCUG00000013505	CPSF6	72	35.931	Oryctolagus_cuniculus
ENSORLG00000006495	CPSF7	80	38.406	ENSOCUG00000024726	CPSF7	58	48.571	Oryctolagus_cuniculus
ENSORLG00000006495	CPSF7	72	40.341	ENSORLG00020016593	cpsf6	69	35.498	Oryzias_latipes_hni
ENSORLG00000006495	CPSF7	100	99.563	ENSORLG00020012657	CPSF7	100	99.563	Oryzias_latipes_hni
ENSORLG00000006495	CPSF7	72	40.341	ENSORLG00015015558	cpsf6	69	35.498	Oryzias_latipes_hsok
ENSORLG00000006495	CPSF7	100	98.908	ENSORLG00015011091	CPSF7	100	98.908	Oryzias_latipes_hsok
ENSORLG00000006495	CPSF7	100	83.224	ENSOMEG00000000539	CPSF7	100	83.007	Oryzias_melastigma
ENSORLG00000006495	CPSF7	72	39.773	ENSOMEG00000009425	cpsf6	69	35.498	Oryzias_melastigma
ENSORLG00000006495	CPSF7	59	40.909	ENSOGAG00000031988	CPSF6	74	34.043	Otolemur_garnettii
ENSORLG00000006495	CPSF7	55	49.558	ENSOARG00000020532	CPSF6	66	42.391	Ovis_aries
ENSORLG00000006495	CPSF7	59	50.000	ENSOARG00000012937	CPSF7	59	47.482	Ovis_aries
ENSORLG00000006495	CPSF7	55	49.558	ENSPPAG00000005301	CPSF6	75	35.193	Pan_paniscus
ENSORLG00000006495	CPSF7	63	43.939	ENSPPRG00000021620	CPSF6	76	35.931	Panthera_pardus
ENSORLG00000006495	CPSF7	83	37.617	ENSPPRG00000008538	CPSF7	78	42.529	Panthera_pardus
ENSORLG00000006495	CPSF7	59	49.558	ENSPTRG00000005205	CPSF6	98	32.582	Pan_troglodytes
ENSORLG00000006495	CPSF7	60	48.696	ENSPANG00000011641	CPSF6	98	32.582	Papio_anubis
ENSORLG00000006495	CPSF7	59	48.718	ENSPKIG00000022613	CPSF6	74	34.074	Paramormyrops_kingsleyae
ENSORLG00000006495	CPSF7	55	49.558	ENSPEMG00000007973	Cpsf6	74	35.789	Peromyscus_maniculatus_bairdii
ENSORLG00000006495	CPSF7	63	43.939	ENSPCIG00000019063	CPSF6	76	35.931	Phascolarctos_cinereus
ENSORLG00000006495	CPSF7	55	49.123	ENSPLAG00000005715	cpsf6	71	35.193	Poecilia_latipinna
ENSORLG00000006495	CPSF7	55	49.123	ENSPMEG00000001353	cpsf6	64	34.513	Poecilia_mexicana
ENSORLG00000006495	CPSF7	55	49.123	ENSPREG00000004417	cpsf6	76	32.673	Poecilia_reticulata
ENSORLG00000006495	CPSF7	63	43.939	ENSPPYG00000004756	CPSF6	76	35.931	Pongo_abelii
ENSORLG00000006495	CPSF7	63	43.939	ENSPCAG00000011574	CPSF6	72	35.931	Procavia_capensis
ENSORLG00000006495	CPSF7	59	49.558	ENSPCOG00000024384	CPSF6	76	35.193	Propithecus_coquereli
ENSORLG00000006495	CPSF7	63	43.939	ENSPVAG00000015753	CPSF6	59	37.629	Pteropus_vampyrus
ENSORLG00000006495	CPSF7	69	39.429	ENSPNYG00000020315	cpsf6	61	35.776	Pundamilia_nyererei
ENSORLG00000006495	CPSF7	65	38.462	ENSPNAG00000024098	CPSF6	70	35.950	Pygocentrus_nattereri
ENSORLG00000006495	CPSF7	62	44.615	ENSRNOG00000005927	Cpsf6	76	35.931	Rattus_norvegicus
ENSORLG00000006495	CPSF7	59	49.558	ENSRBIG00000042827	CPSF6	98	32.582	Rhinopithecus_bieti
ENSORLG00000006495	CPSF7	83	38.140	ENSRBIG00000031429	CPSF7	64	61.842	Rhinopithecus_bieti
ENSORLG00000006495	CPSF7	63	43.939	ENSRROG00000042758	CPSF6	98	32.787	Rhinopithecus_roxellana
ENSORLG00000006495	CPSF7	55	49.558	ENSSBOG00000010652	CPSF6	96	32.759	Saimiri_boliviensis_boliviensis
ENSORLG00000006495	CPSF7	59	41.007	ENSSHAG00000006635	CPSF6	75	34.177	Sarcophilus_harrisii
ENSORLG00000006495	CPSF7	87	43.675	ENSSFOG00015010288	cpsf7	93	42.762	Scleropages_formosus
ENSORLG00000006495	CPSF7	60	48.696	ENSSFOG00015001688	CPSF6	62	34.711	Scleropages_formosus
ENSORLG00000006495	CPSF7	58	48.649	ENSSMAG00000000471	cpsf6	62	33.766	Scophthalmus_maximus
ENSORLG00000006495	CPSF7	72	38.857	ENSSDUG00000005024	cpsf6	68	35.345	Seriola_dumerili
ENSORLG00000006495	CPSF7	72	38.857	ENSSLDG00000009042	cpsf6	68	35.345	Seriola_lalandi_dorsalis
ENSORLG00000006495	CPSF7	59	43.939	ENSSARG00000006743	CPSF6	68	35.931	Sorex_araneus
ENSORLG00000006495	CPSF7	63	43.939	ENSSPUG00000001238	CPSF6	82	33.333	Sphenodon_punctatus
ENSORLG00000006495	CPSF7	59	48.276	ENSSPAG00000013906	cpsf6	68	35.965	Stegastes_partitus
ENSORLG00000006495	CPSF7	80	38.889	ENSSSCG00000013083	CPSF7	62	63.158	Sus_scrofa
ENSORLG00000006495	CPSF7	63	43.939	ENSSSCG00000038031	CPSF6	76	35.931	Sus_scrofa
ENSORLG00000006495	CPSF7	69	39.773	ENSTRUG00000016461	cpsf6	56	36.747	Takifugu_rubripes
ENSORLG00000006495	CPSF7	69	39.773	ENSTNIG00000007576	cpsf6	56	36.747	Tetraodon_nigroviridis
ENSORLG00000006495	CPSF7	59	43.939	ENSVPAG00000008469	CPSF6	70	35.931	Vicugna_pacos
ENSORLG00000006495	CPSF7	80	39.329	ENSVVUG00000004939	CPSF7	62	63.158	Vulpes_vulpes
ENSORLG00000006495	CPSF7	65	37.143	ENSXETG00000006715	cpsf7	63	41.558	Xenopus_tropicalis
ENSORLG00000006495	CPSF7	55	49.123	ENSXMAG00000003459	cpsf6	60	34.513	Xiphophorus_maculatus