EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000006758 (Gene tree)
Gene ID: 101167789
Gene Symbol: larp4aa
Alias: -
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 15442 bases
Position: chr7:11284200-11299641
Accession: 101167789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000008485	La	PF05383.17	2.3e-17	1	1
ENSORLP00000034129	La	PF05383.17	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000044998	-	5565	XM_011477040	ENSORLP00000034129	794 (aa)	XP_011475342	UPI0005CBEDAA
ENSORLT00000008486	-	5523	XM_011477042	ENSORLP00000008485	780 (aa)	XP_011475344	H2LQZ0

Gene Model

Click here to download ENSORLG00000006758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000006758	larp4aa	68	39.753	ENSORLG00000006080	LARP4B	69	40.072

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006758	larp4aa	83	63.415	ENSG00000161813	LARP4	99	63.514	Homo_sapiens
ENSORLG00000006758	larp4aa	100	79.579	ENSAPOG00000007142	larp4aa	100	80.322	Acanthochromis_polyacanthus
ENSORLG00000006758	larp4aa	95	51.421	ENSAPOG00000021331	larp4ab	100	51.876	Acanthochromis_polyacanthus
ENSORLG00000006758	larp4aa	95	49.217	ENSAMEG00000001275	LARP4	99	50.131	Ailuropoda_melanoleuca
ENSORLG00000006758	larp4aa	100	75.819	ENSACIG00000001198	larp4aa	87	89.937	Amphilophus_citrinellus
ENSORLG00000006758	larp4aa	100	81.211	ENSAOCG00000002408	larp4aa	100	82.200	Amphiprion_ocellaris
ENSORLG00000006758	larp4aa	95	50.513	ENSAOCG00000006387	larp4ab	100	51.351	Amphiprion_ocellaris
ENSORLG00000006758	larp4aa	100	80.841	ENSAPEG00000019058	larp4aa	100	81.829	Amphiprion_percula
ENSORLG00000006758	larp4aa	100	80.101	ENSATEG00000020715	larp4aa	100	80.101	Anabas_testudineus
ENSORLG00000006758	larp4aa	95	48.214	ENSATEG00000001018	larp4ab	100	48.342	Anabas_testudineus
ENSORLG00000006758	larp4aa	95	50.128	ENSAPLG00000013661	LARP4	99	51.403	Anas_platyrhynchos
ENSORLG00000006758	larp4aa	95	49.803	ENSACAG00000017133	LARP4	96	49.935	Anolis_carolinensis
ENSORLG00000006758	larp4aa	87	61.509	ENSANAG00000029342	LARP4	99	63.102	Aotus_nancymaae
ENSORLG00000006758	larp4aa	100	76.478	ENSACLG00000002575	larp4aa	100	78.352	Astatotilapia_calliptera
ENSORLG00000006758	larp4aa	100	50.549	ENSAMXG00000001515	larp4ab	100	52.169	Astyanax_mexicanus
ENSORLG00000006758	larp4aa	100	63.082	ENSAMXG00000036493	larp4aa	100	64.346	Astyanax_mexicanus
ENSORLG00000006758	larp4aa	95	48.446	ENSBTAG00000017164	LARP4	99	49.159	Bos_taurus
ENSORLG00000006758	larp4aa	87	61.887	ENSCJAG00000021131	LARP4	99	61.887	Callithrix_jacchus
ENSORLG00000006758	larp4aa	95	48.958	ENSCAFG00000008174	LARP4	99	50.196	Canis_familiaris
ENSORLG00000006758	larp4aa	95	49.089	ENSCAFG00020014554	LARP4	99	60.071	Canis_lupus_dingo
ENSORLG00000006758	larp4aa	95	48.446	ENSCHIG00000025965	LARP4	99	49.159	Capra_hircus
ENSORLG00000006758	larp4aa	83	63.144	ENSTSYG00000004342	LARP4	99	63.243	Carlito_syrichta
ENSORLG00000006758	larp4aa	94	38.645	ENSCAPG00000012942	LARP4	99	38.645	Cavia_aperea
ENSORLG00000006758	larp4aa	95	45.039	ENSCPOG00000020519	LARP4	99	45.822	Cavia_porcellus
ENSORLG00000006758	larp4aa	87	60.755	ENSCCAG00000024439	LARP4	99	62.567	Cebus_capucinus
ENSORLG00000006758	larp4aa	95	47.059	ENSCATG00000044528	LARP4	99	47.911	Cercocebus_atys
ENSORLG00000006758	larp4aa	95	48.508	ENSCLAG00000001829	LARP4	99	49.287	Chinchilla_lanigera
ENSORLG00000006758	larp4aa	95	51.157	ENSCPBG00000019407	LARP4	90	52.005	Chrysemys_picta_bellii
ENSORLG00000006758	larp4aa	83	64.499	ENSCANG00000029159	-	99	64.595	Colobus_angolensis_palliatus
ENSORLG00000006758	larp4aa	85	54.753	ENSCANG00000033097	-	99	54.753	Colobus_angolensis_palliatus
ENSORLG00000006758	larp4aa	95	49.738	ENSCGRG00001010818	Larp4	99	50.651	Cricetulus_griseus_chok1gshd
ENSORLG00000006758	larp4aa	95	49.738	ENSCGRG00000009382	Larp4	100	50.651	Cricetulus_griseus_crigri
ENSORLG00000006758	larp4aa	60	52.695	ENSCSEG00000003240	larp4ab	92	48.854	Cynoglossus_semilaevis
ENSORLG00000006758	larp4aa	100	76.377	ENSCSEG00000001963	larp4aa	100	76.499	Cynoglossus_semilaevis
ENSORLG00000006758	larp4aa	100	77.284	ENSCVAG00000005488	larp4aa	100	77.901	Cyprinodon_variegatus
ENSORLG00000006758	larp4aa	95	50.649	ENSDARG00000074979	larp4ab	81	83.916	Danio_rerio
ENSORLG00000006758	larp4aa	100	62.639	ENSDARG00000078401	larp4aa	100	62.945	Danio_rerio
ENSORLG00000006758	larp4aa	95	48.512	ENSDNOG00000038525	LARP4	99	49.354	Dasypus_novemcinctus
ENSORLG00000006758	larp4aa	95	46.641	ENSDORG00000004013	Larp4	99	47.668	Dipodomys_ordii
ENSORLG00000006758	larp4aa	54	85.926	ENSETEG00000011683	LARP4	57	85.926	Echinops_telfairi
ENSORLG00000006758	larp4aa	58	42.449	ENSEBUG00000004426	LARP4	82	42.073	Eptatretus_burgeri
ENSORLG00000006758	larp4aa	53	56.589	ENSEBUG00000010394	LARP4	84	40.036	Eptatretus_burgeri
ENSORLG00000006758	larp4aa	83	58.974	ENSEASG00005004356	LARP4	100	58.974	Equus_asinus_asinus
ENSORLG00000006758	larp4aa	95	48.755	ENSECAG00000012479	LARP4	99	50.354	Equus_caballus
ENSORLG00000006758	larp4aa	69	84.615	ENSEEUG00000000316	LARP4	69	84.615	Erinaceus_europaeus
ENSORLG00000006758	larp4aa	79	64.811	ENSELUG00000000395	larp4aa	98	62.826	Esox_lucius
ENSORLG00000006758	larp4aa	95	53.042	ENSELUG00000018650	larp4ab	88	79.386	Esox_lucius
ENSORLG00000006758	larp4aa	83	64.247	ENSFCAG00000031897	LARP4	99	63.926	Felis_catus
ENSORLG00000006758	larp4aa	80	51.450	ENSFALG00000002114	LARP4	95	52.504	Ficedula_albicollis
ENSORLG00000006758	larp4aa	95	49.219	ENSFDAG00000006406	-	99	49.740	Fukomys_damarensis
ENSORLG00000006758	larp4aa	100	76.622	ENSFHEG00000004338	larp4aa	100	76.989	Fundulus_heteroclitus
ENSORLG00000006758	larp4aa	95	46.736	ENSFHEG00000013854	larp4ab	99	46.606	Fundulus_heteroclitus
ENSORLG00000006758	larp4aa	100	69.847	ENSGMOG00000008246	larp4aa	100	70.611	Gadus_morhua
ENSORLG00000006758	larp4aa	91	49.266	ENSGALG00000042122	LARP4	92	50.672	Gallus_gallus
ENSORLG00000006758	larp4aa	95	48.774	ENSGAFG00000021777	larp4ab	99	49.153	Gambusia_affinis
ENSORLG00000006758	larp4aa	95	48.219	ENSGACG00000000680	larp4ab	97	51.890	Gasterosteus_aculeatus
ENSORLG00000006758	larp4aa	100	76.142	ENSGACG00000008381	larp4aa	98	84.211	Gasterosteus_aculeatus
ENSORLG00000006758	larp4aa	95	51.429	ENSGAGG00000006969	LARP4	99	51.948	Gopherus_agassizii
ENSORLG00000006758	larp4aa	95	47.520	ENSGGOG00000015230	LARP4	99	61.509	Gorilla_gorilla
ENSORLG00000006758	larp4aa	100	76.232	ENSHBUG00000023074	larp4aa	100	78.106	Haplochromis_burtoni
ENSORLG00000006758	larp4aa	81	48.834	ENSHGLG00000013875	-	96	48.834	Heterocephalus_glaber_female
ENSORLG00000006758	larp4aa	84	50.966	ENSHGLG00000005513	-	96	51.560	Heterocephalus_glaber_female
ENSORLG00000006758	larp4aa	95	48.698	ENSHGLG00100016984	-	99	49.285	Heterocephalus_glaber_male
ENSORLG00000006758	larp4aa	95	47.569	ENSHGLG00100011678	-	99	47.563	Heterocephalus_glaber_male
ENSORLG00000006758	larp4aa	95	45.596	ENSHCOG00000020857	larp4ab	100	45.337	Hippocampus_comes
ENSORLG00000006758	larp4aa	100	70.559	ENSHCOG00000015951	larp4aa	100	70.880	Hippocampus_comes
ENSORLG00000006758	larp4aa	100	61.224	ENSIPUG00000007514	larp4aa	100	61.998	Ictalurus_punctatus
ENSORLG00000006758	larp4aa	95	47.424	ENSIPUG00000021659	larp4ab	99	48.280	Ictalurus_punctatus
ENSORLG00000006758	larp4aa	95	49.870	ENSSTOG00000003553	LARP4	99	50.783	Ictidomys_tridecemlineatus
ENSORLG00000006758	larp4aa	95	48.711	ENSKMAG00000018556	larp4ab	100	49.288	Kryptolebias_marmoratus
ENSORLG00000006758	larp4aa	100	78.040	ENSKMAG00000006800	larp4aa	100	78.536	Kryptolebias_marmoratus
ENSORLG00000006758	larp4aa	97	77.861	ENSLBEG00000014537	larp4aa	100	77.327	Labrus_bergylta
ENSORLG00000006758	larp4aa	95	48.695	ENSLBEG00000019306	larp4ab	100	49.153	Labrus_bergylta
ENSORLG00000006758	larp4aa	95	51.015	ENSLACG00000019090	LARP4	99	51.392	Latimeria_chalumnae
ENSORLG00000006758	larp4aa	100	58.313	ENSLOCG00000007113	larp4ab	100	59.341	Lepisosteus_oculatus
ENSORLG00000006758	larp4aa	95	48.042	ENSLAFG00000005160	LARP4	99	49.283	Loxodonta_africana
ENSORLG00000006758	larp4aa	83	63.686	ENSMFAG00000043681	LARP4	99	63.784	Macaca_fascicularis
ENSORLG00000006758	larp4aa	83	63.686	ENSMMUG00000008172	LARP4	99	63.784	Macaca_mulatta
ENSORLG00000006758	larp4aa	94	47.059	ENSMNEG00000034602	LARP4	98	47.797	Macaca_nemestrina
ENSORLG00000006758	larp4aa	71	66.964	ENSMNEG00000037799	-	84	66.964	Macaca_nemestrina
ENSORLG00000006758	larp4aa	83	63.686	ENSMLEG00000039661	LARP4	99	63.784	Mandrillus_leucophaeus
ENSORLG00000006758	larp4aa	95	49.870	ENSMAMG00000002616	larp4ab	100	50.194	Mastacembelus_armatus
ENSORLG00000006758	larp4aa	100	80.395	ENSMAMG00000011206	larp4aa	100	80.395	Mastacembelus_armatus
ENSORLG00000006758	larp4aa	100	76.601	ENSMZEG00005001813	larp4aa	100	78.229	Maylandia_zebra
ENSORLG00000006758	larp4aa	91	48.529	ENSMGAG00000010598	LARP4	92	50.882	Meleagris_gallopavo
ENSORLG00000006758	larp4aa	55	83.571	ENSMICG00000030156	-	87	83.571	Microcebus_murinus
ENSORLG00000006758	larp4aa	70	77.308	ENSMICG00000012388	-	97	83.974	Microcebus_murinus
ENSORLG00000006758	larp4aa	95	49.935	ENSMOCG00000020635	Larp4	99	50.196	Microtus_ochrogaster
ENSORLG00000006758	larp4aa	100	73.325	ENSMMOG00000004785	larp4aa	100	73.325	Mola_mola
ENSORLG00000006758	larp4aa	95	46.907	ENSMMOG00000021861	larp4ab	92	57.542	Mola_mola
ENSORLG00000006758	larp4aa	72	64.798	MGP_CAROLIEiJ_G0020281	Larp4	83	64.526	Mus_caroli
ENSORLG00000006758	larp4aa	95	48.433	ENSMUSG00000023025	Larp4	99	50.000	Mus_musculus
ENSORLG00000006758	larp4aa	95	49.217	MGP_PahariEiJ_G0020284	Larp4	99	50.131	Mus_pahari
ENSORLG00000006758	larp4aa	95	49.283	ENSMPUG00000008706	LARP4	96	50.260	Mustela_putorius_furo
ENSORLG00000006758	larp4aa	95	47.843	ENSMLUG00000012513	-	99	48.825	Myotis_lucifugus
ENSORLG00000006758	larp4aa	95	48.037	ENSNGAG00000001577	-	99	49.086	Nannospalax_galili
ENSORLG00000006758	larp4aa	100	76.753	ENSNBRG00000011292	larp4aa	100	77.983	Neolamprologus_brichardi
ENSORLG00000006758	larp4aa	83	63.686	ENSNLEG00000017798	LARP4	99	63.784	Nomascus_leucogenys
ENSORLG00000006758	larp4aa	95	49.215	ENSODEG00000009770	LARP4	100	50.393	Octodon_degus
ENSORLG00000006758	larp4aa	100	77.358	ENSONIG00000011895	larp4aa	100	78.518	Oreochromis_niloticus
ENSORLG00000006758	larp4aa	95	49.354	ENSONIG00000019124	larp4ab	99	48.840	Oreochromis_niloticus
ENSORLG00000006758	larp4aa	64	56.084	ENSOANG00000004373	LARP4	92	56.654	Ornithorhynchus_anatinus
ENSORLG00000006758	larp4aa	95	49.022	ENSOCUG00000021417	-	99	49.740	Oryctolagus_cuniculus
ENSORLG00000006758	larp4aa	95	49.022	ENSOCUG00000026872	-	99	49.481	Oryctolagus_cuniculus
ENSORLG00000006758	larp4aa	100	99.118	ENSORLG00020010258	larp4aa	100	99.118	Oryzias_latipes_hni
ENSORLG00000006758	larp4aa	100	98.741	ENSORLG00015002292	larp4aa	100	98.741	Oryzias_latipes_hsok
ENSORLG00000006758	larp4aa	100	85.571	ENSOMEG00000019749	larp4aa	96	95.143	Oryzias_melastigma
ENSORLG00000006758	larp4aa	64	53.802	ENSOGAG00000001415	LARP4	99	54.876	Otolemur_garnettii
ENSORLG00000006758	larp4aa	95	48.446	ENSOARG00000017702	LARP4	99	49.159	Ovis_aries
ENSORLG00000006758	larp4aa	68	63.325	ENSPPAG00000035100	LARP4	99	63.514	Pan_paniscus
ENSORLG00000006758	larp4aa	83	64.247	ENSPPRG00000004522	LARP4	99	63.926	Panthera_pardus
ENSORLG00000006758	larp4aa	83	64.247	ENSPTIG00000015617	LARP4	99	63.926	Panthera_tigris_altaica
ENSORLG00000006758	larp4aa	83	63.144	ENSPTRG00000004935	LARP4	99	63.243	Pan_troglodytes
ENSORLG00000006758	larp4aa	83	64.228	ENSPANG00000022964	LARP4	99	64.324	Papio_anubis
ENSORLG00000006758	larp4aa	100	58.134	ENSPKIG00000005950	larp4ab	100	58.014	Paramormyrops_kingsleyae
ENSORLG00000006758	larp4aa	83	65.092	ENSPSIG00000015867	LARP4	100	49.936	Pelodiscus_sinensis
ENSORLG00000006758	larp4aa	95	48.235	ENSPEMG00000018433	Larp4	99	49.347	Peromyscus_maniculatus_bairdii
ENSORLG00000006758	larp4aa	52	57.708	ENSPMAG00000002788	LARP4	97	42.647	Petromyzon_marinus
ENSORLG00000006758	larp4aa	96	49.233	ENSPCIG00000000384	LARP4	99	50.000	Phascolarctos_cinereus
ENSORLG00000006758	larp4aa	100	76.543	ENSPFOG00000013148	larp4aa	100	76.601	Poecilia_formosa
ENSORLG00000006758	larp4aa	95	48.438	ENSPFOG00000009764	larp4ab	99	48.816	Poecilia_formosa
ENSORLG00000006758	larp4aa	95	48.240	ENSPLAG00000008502	larp4ab	99	48.617	Poecilia_latipinna
ENSORLG00000006758	larp4aa	100	76.256	ENSPLAG00000013626	larp4aa	100	76.316	Poecilia_latipinna
ENSORLG00000006758	larp4aa	95	47.922	ENSPMEG00000002720	larp4ab	99	48.168	Poecilia_mexicana
ENSORLG00000006758	larp4aa	100	76.355	ENSPMEG00000014271	larp4aa	100	76.658	Poecilia_mexicana
ENSORLG00000006758	larp4aa	100	76.662	ENSPREG00000022597	larp4aa	100	76.846	Poecilia_reticulata
ENSORLG00000006758	larp4aa	64	57.171	ENSPPYG00000004512	-	99	57.752	Pongo_abelii
ENSORLG00000006758	larp4aa	77	66.897	ENSPCAG00000003671	LARP4	84	66.897	Procavia_capensis
ENSORLG00000006758	larp4aa	83	63.957	ENSPCOG00000026291	LARP4	99	64.054	Propithecus_coquereli
ENSORLG00000006758	larp4aa	100	76.478	ENSPNYG00000022265	larp4aa	100	78.352	Pundamilia_nyererei
ENSORLG00000006758	larp4aa	96	61.318	ENSPNAG00000024770	larp4aa	99	62.376	Pygocentrus_nattereri
ENSORLG00000006758	larp4aa	100	50.184	ENSPNAG00000014478	larp4ab	99	54.183	Pygocentrus_nattereri
ENSORLG00000006758	larp4aa	69	54.864	ENSRBIG00000036890	-	99	54.864	Rhinopithecus_bieti
ENSORLG00000006758	larp4aa	81	55.470	ENSRBIG00000038857	-	93	63.784	Rhinopithecus_bieti
ENSORLG00000006758	larp4aa	69	54.864	ENSRROG00000025487	-	99	54.864	Rhinopithecus_roxellana
ENSORLG00000006758	larp4aa	83	63.686	ENSRROG00000042764	-	99	63.784	Rhinopithecus_roxellana
ENSORLG00000006758	larp4aa	87	60.755	ENSSBOG00000026650	LARP4	99	62.032	Saimiri_boliviensis_boliviensis
ENSORLG00000006758	larp4aa	95	62.162	ENSSFOG00015003868	larp4aa	99	62.934	Scleropages_formosus
ENSORLG00000006758	larp4aa	100	58.596	ENSSFOG00015014096	larp4ab	100	58.696	Scleropages_formosus
ENSORLG00000006758	larp4aa	100	78.245	ENSSMAG00000019473	larp4aa	100	78.986	Scophthalmus_maximus
ENSORLG00000006758	larp4aa	95	49.114	ENSSMAG00000002838	larp4ab	100	50.442	Scophthalmus_maximus
ENSORLG00000006758	larp4aa	100	79.901	ENSSDUG00000010621	larp4aa	100	81.504	Seriola_dumerili
ENSORLG00000006758	larp4aa	95	51.285	ENSSDUG00000006655	larp4ab	100	51.472	Seriola_dumerili
ENSORLG00000006758	larp4aa	95	50.830	ENSSLDG00000001791	larp4ab	100	52.246	Seriola_lalandi_dorsalis
ENSORLG00000006758	larp4aa	100	79.655	ENSSLDG00000004942	larp4aa	100	80.888	Seriola_lalandi_dorsalis
ENSORLG00000006758	larp4aa	84	54.364	ENSSARG00000012469	LARP4	89	55.920	Sorex_araneus
ENSORLG00000006758	larp4aa	90	48.309	ENSSPUG00000016552	LARP4	92	50.409	Sphenodon_punctatus
ENSORLG00000006758	larp4aa	95	50.648	ENSSPAG00000002172	larp4ab	100	51.492	Stegastes_partitus
ENSORLG00000006758	larp4aa	87	89.051	ENSSPAG00000007222	larp4aa	94	89.051	Stegastes_partitus
ENSORLG00000006758	larp4aa	95	48.568	ENSSSCG00000028516	LARP4	98	58.333	Sus_scrofa
ENSORLG00000006758	larp4aa	95	49.610	ENSTGUG00000003479	LARP4	99	51.232	Taeniopygia_guttata
ENSORLG00000006758	larp4aa	64	55.534	ENSTRUG00000007206	larp4ab	100	48.399	Takifugu_rubripes
ENSORLG00000006758	larp4aa	95	71.580	ENSTNIG00000015109	larp4aa	99	71.580	Tetraodon_nigroviridis
ENSORLG00000006758	larp4aa	95	45.431	ENSTNIG00000014571	larp4ab	100	45.431	Tetraodon_nigroviridis
ENSORLG00000006758	larp4aa	80	54.118	ENSTBEG00000005167	LARP4	99	42.539	Tupaia_belangeri
ENSORLG00000006758	larp4aa	95	47.539	ENSTTRG00000003764	LARP4	99	47.539	Tursiops_truncatus
ENSORLG00000006758	larp4aa	65	55.871	ENSUAMG00000013764	LARP4	97	58.027	Ursus_americanus
ENSORLG00000006758	larp4aa	95	49.675	ENSUMAG00000008473	LARP4	99	50.721	Ursus_maritimus
ENSORLG00000006758	larp4aa	95	47.933	ENSVPAG00000010136	LARP4	99	48.964	Vicugna_pacos
ENSORLG00000006758	larp4aa	95	49.089	ENSVVUG00000024717	LARP4	99	60.071	Vulpes_vulpes
ENSORLG00000006758	larp4aa	86	51.814	ENSXETG00000007283	larp4	95	52.098	Xenopus_tropicalis
ENSORLG00000006758	larp4aa	100	72.457	ENSXCOG00000006387	larp4aa	100	72.346	Xiphophorus_couchianus
ENSORLG00000006758	larp4aa	100	77.723	ENSXMAG00000010519	larp4aa	100	76.601	Xiphophorus_maculatus
ENSORLG00000006758	larp4aa	95	49.217	ENSXMAG00000002156	larp4ab	99	49.086	Xiphophorus_maculatus