EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000006779 (Gene tree)
Gene ID: -
Gene Symbol: sar1ab
Alias: -
Full Name: GTP-binding protein SAR1b
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 5068 bases
Position: chr15:21490378-21495445
Accession: 101155138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000008519	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000008520	-	2776	XM_020709554	ENSORLP00000008519	295 (aa)	XP_020565213	H2LR22

Gene Model

Click here to download ENSORLG00000006779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000006779	sar1ab	63	32.105	ENSORLG00000007235	-	95	32.105
ENSORLG00000006779	sar1ab	67	81.818	ENSORLG00000009132	-	90	81.818
ENSORLG00000006779	sar1ab	63	31.551	ENSORLG00000005571	arl2	95	31.551
ENSORLG00000006779	sar1ab	64	30.688	ENSORLG00000005005	arl3l2	95	30.688
ENSORLG00000006779	sar1ab	58	30.814	ENSORLG00000010952	arl3	92	30.814
ENSORLG00000006779	sar1ab	56	30.120	ENSORLG00000008909	arl1	91	30.120
ENSORLG00000006779	sar1ab	63	30.526	ENSORLG00000005063	ARL6	96	30.526
ENSORLG00000006779	sar1ab	67	83.333	ENSORLG00000000932	sar1b	100	83.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006779	sar1ab	67	91.414	ENSACIG00000019827	sar1ab	100	91.414	Amphilophus_citrinellus
ENSORLG00000006779	sar1ab	67	93.434	ENSAOCG00000022062	sar1ab	100	93.434	Amphiprion_ocellaris
ENSORLG00000006779	sar1ab	67	93.434	ENSAPEG00000011525	sar1ab	100	93.434	Amphiprion_percula
ENSORLG00000006779	sar1ab	67	91.414	ENSATEG00000003466	sar1ab	100	91.414	Anabas_testudineus
ENSORLG00000006779	sar1ab	67	89.899	ENSACLG00000013053	sar1ab	100	89.899	Astatotilapia_calliptera
ENSORLG00000006779	sar1ab	67	89.899	ENSCSEG00000004825	sar1ab	100	89.899	Cynoglossus_semilaevis
ENSORLG00000006779	sar1ab	67	90.909	ENSCVAG00000015162	sar1ab	100	90.909	Cyprinodon_variegatus
ENSORLG00000006779	sar1ab	67	80.303	ENSCVAG00000006500	-	100	80.303	Cyprinodon_variegatus
ENSORLG00000006779	sar1ab	67	87.879	ENSDARG00000033320	sar1ab	100	87.879	Danio_rerio
ENSORLG00000006779	sar1ab	67	90.909	ENSELUG00000024279	sar1ab	100	90.909	Esox_lucius
ENSORLG00000006779	sar1ab	67	83.838	ENSELUG00000013652	sar1a	100	83.838	Esox_lucius
ENSORLG00000006779	sar1ab	67	89.899	ENSFHEG00000021773	sar1ab	100	89.899	Fundulus_heteroclitus
ENSORLG00000006779	sar1ab	67	80.808	ENSFHEG00000012352	-	100	80.808	Fundulus_heteroclitus
ENSORLG00000006779	sar1ab	67	87.374	ENSGMOG00000012588	sar1ab	100	87.374	Gadus_morhua
ENSORLG00000006779	sar1ab	67	81.818	ENSGAFG00000004846	-	100	81.818	Gambusia_affinis
ENSORLG00000006779	sar1ab	67	91.414	ENSGAFG00000009702	sar1ab	100	91.414	Gambusia_affinis
ENSORLG00000006779	sar1ab	67	89.394	ENSGACG00000008616	sar1ab	100	89.394	Gasterosteus_aculeatus
ENSORLG00000006779	sar1ab	67	89.899	ENSHBUG00000021221	sar1ab	100	89.899	Haplochromis_burtoni
ENSORLG00000006779	sar1ab	72	82.870	ENSHCOG00000002845	sar1ab	87	82.870	Hippocampus_comes
ENSORLG00000006779	sar1ab	67	91.414	ENSKMAG00000018006	sar1ab	100	91.414	Kryptolebias_marmoratus
ENSORLG00000006779	sar1ab	67	90.909	ENSLBEG00000001114	sar1ab	100	90.909	Labrus_bergylta
ENSORLG00000006779	sar1ab	67	91.414	ENSMAMG00000021314	sar1ab	100	91.414	Mastacembelus_armatus
ENSORLG00000006779	sar1ab	67	89.899	ENSMZEG00005027606	sar1ab	100	89.899	Maylandia_zebra
ENSORLG00000006779	sar1ab	67	89.899	ENSMMOG00000010360	sar1ab	100	89.899	Mola_mola
ENSORLG00000006779	sar1ab	67	88.384	ENSMALG00000005831	sar1ab	100	88.384	Monopterus_albus
ENSORLG00000006779	sar1ab	67	90.404	ENSNBRG00000018772	sar1ab	100	90.404	Neolamprologus_brichardi
ENSORLG00000006779	sar1ab	67	91.414	ENSONIG00000018509	sar1ab	100	91.414	Oreochromis_niloticus
ENSORLG00000006779	sar1ab	67	81.818	ENSORLG00020007024	-	90	81.818	Oryzias_latipes_hni
ENSORLG00000006779	sar1ab	100	97.627	ENSORLG00020005458	sar1ab	100	99.495	Oryzias_latipes_hni
ENSORLG00000006779	sar1ab	67	81.313	ENSORLG00015006223	-	94	83.929	Oryzias_latipes_hsok
ENSORLG00000006779	sar1ab	67	100.000	ENSORLG00015010542	sar1ab	100	100.000	Oryzias_latipes_hsok
ENSORLG00000006779	sar1ab	68	81.000	ENSOMEG00000012020	-	100	81.313	Oryzias_melastigma
ENSORLG00000006779	sar1ab	67	96.465	ENSOMEG00000004948	sar1ab	100	96.465	Oryzias_melastigma
ENSORLG00000006779	sar1ab	67	83.838	ENSPKIG00000007615	sar1ab	100	83.838	Paramormyrops_kingsleyae
ENSORLG00000006779	sar1ab	67	89.394	ENSPMGG00000013330	sar1ab	100	89.394	Periophthalmus_magnuspinnatus
ENSORLG00000006779	sar1ab	67	92.424	ENSPFOG00000023432	sar1ab	100	92.424	Poecilia_formosa
ENSORLG00000006779	sar1ab	67	92.929	ENSPLAG00000023705	sar1ab	100	92.929	Poecilia_latipinna
ENSORLG00000006779	sar1ab	67	80.303	ENSPMEG00000001717	-	100	80.303	Poecilia_mexicana
ENSORLG00000006779	sar1ab	67	92.424	ENSPMEG00000000559	sar1ab	100	92.424	Poecilia_mexicana
ENSORLG00000006779	sar1ab	67	92.424	ENSPREG00000016098	sar1ab	100	92.424	Poecilia_reticulata
ENSORLG00000006779	sar1ab	67	90.404	ENSPNYG00000011603	sar1ab	100	90.404	Pundamilia_nyererei
ENSORLG00000006779	sar1ab	67	89.394	ENSPNAG00000008007	sar1ab	100	89.394	Pygocentrus_nattereri
ENSORLG00000006779	sar1ab	67	86.869	ENSSFOG00015014010	sar1a	100	86.869	Scleropages_formosus
ENSORLG00000006779	sar1ab	67	90.404	ENSSDUG00000010773	sar1ab	100	90.404	Seriola_dumerili
ENSORLG00000006779	sar1ab	67	90.404	ENSSLDG00000025558	sar1ab	100	90.404	Seriola_lalandi_dorsalis
ENSORLG00000006779	sar1ab	67	93.939	ENSSPAG00000009194	sar1ab	100	93.939	Stegastes_partitus
ENSORLG00000006779	sar1ab	67	88.384	ENSTRUG00000007269	sar1ab	100	88.384	Takifugu_rubripes
ENSORLG00000006779	sar1ab	67	87.374	ENSTNIG00000008635	sar1ab	100	87.374	Tetraodon_nigroviridis
ENSORLG00000006779	sar1ab	67	91.919	ENSXMAG00000003130	sar1ab	100	91.919	Xiphophorus_maculatus
ENSORLG00000006779	sar1ab	67	81.313	ENSXMAG00000026223	SAR1A	100	81.313	Xiphophorus_maculatus