EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000007040 (Gene tree)
Gene ID: 101159806
Gene Symbol: si:dkey-17e16.10
Alias: -
Full Name: mitochondrial ribosomal protein S12
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 1393 bases
Position: chr3:19832631-19834023
Accession: 101159806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000008844	Ribosom_S12_S23	PF00164.25	2.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000008845	-	457	XM_004067004	ENSORLP00000008844	140 (aa)	XP_004067052	H2LRY8

Gene Model

Click here to download ENSORLG00000007040's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000007040	si:dkey-17e16.10	76	35.385	ENSORLG00000025943	rps23	87	35.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007040	si:dkey-17e16.10	79	79.091	ENSG00000128626	MRPS12	80	79.091	Homo_sapiens
ENSORLG00000007040	si:dkey-17e16.10	100	87.413	ENSAPOG00000005047	si:dkey-17e16.10	100	87.413	Acanthochromis_polyacanthus
ENSORLG00000007040	si:dkey-17e16.10	80	81.250	ENSAMEG00000008722	MRPS12	81	81.250	Ailuropoda_melanoleuca
ENSORLG00000007040	si:dkey-17e16.10	100	88.811	ENSACIG00000016095	si:dkey-17e16.10	100	88.811	Amphilophus_citrinellus
ENSORLG00000007040	si:dkey-17e16.10	100	87.413	ENSAOCG00000018530	si:dkey-17e16.10	100	87.413	Amphiprion_ocellaris
ENSORLG00000007040	si:dkey-17e16.10	100	86.713	ENSAPEG00000019785	si:dkey-17e16.10	100	86.713	Amphiprion_percula
ENSORLG00000007040	si:dkey-17e16.10	100	88.811	ENSATEG00000018924	si:dkey-17e16.10	100	88.811	Anabas_testudineus
ENSORLG00000007040	si:dkey-17e16.10	79	82.727	ENSAPLG00000011925	-	79	82.727	Anas_platyrhynchos
ENSORLG00000007040	si:dkey-17e16.10	78	75.229	ENSAPLG00000014350	-	73	75.229	Anas_platyrhynchos
ENSORLG00000007040	si:dkey-17e16.10	79	83.636	ENSACAG00000003829	MRPS12	76	83.636	Anolis_carolinensis
ENSORLG00000007040	si:dkey-17e16.10	79	80.180	ENSANAG00000033654	MRPS12	80	80.180	Aotus_nancymaae
ENSORLG00000007040	si:dkey-17e16.10	100	89.510	ENSACLG00000013979	si:dkey-17e16.10	95	89.510	Astatotilapia_calliptera
ENSORLG00000007040	si:dkey-17e16.10	100	69.863	ENSAMXG00000025945	si:dkey-17e16.10	100	70.548	Astyanax_mexicanus
ENSORLG00000007040	si:dkey-17e16.10	83	78.448	ENSBTAG00000001782	MRPS12	83	78.448	Bos_taurus
ENSORLG00000007040	si:dkey-17e16.10	69	58.586	WBGene00011391	mrps-12	63	58.586	Caenorhabditis_elegans
ENSORLG00000007040	si:dkey-17e16.10	79	80.180	ENSCJAG00000043176	MRPS12	80	80.180	Callithrix_jacchus
ENSORLG00000007040	si:dkey-17e16.10	99	73.759	ENSCAFG00000005623	MRPS12	99	73.759	Canis_familiaris
ENSORLG00000007040	si:dkey-17e16.10	99	73.759	ENSCAFG00020016784	MRPS12	99	73.759	Canis_lupus_dingo
ENSORLG00000007040	si:dkey-17e16.10	83	78.448	ENSCHIG00000013852	MRPS12	83	78.448	Capra_hircus
ENSORLG00000007040	si:dkey-17e16.10	79	82.883	ENSTSYG00000009568	MRPS12	80	82.883	Carlito_syrichta
ENSORLG00000007040	si:dkey-17e16.10	80	81.250	ENSCAPG00000009543	MRPS12	82	81.250	Cavia_aperea
ENSORLG00000007040	si:dkey-17e16.10	99	69.504	ENSCPOG00000035217	MRPS12	99	69.504	Cavia_porcellus
ENSORLG00000007040	si:dkey-17e16.10	79	79.091	ENSCCAG00000035388	MRPS12	80	79.091	Cebus_capucinus
ENSORLG00000007040	si:dkey-17e16.10	79	79.279	ENSCATG00000038438	MRPS12	80	79.279	Cercocebus_atys
ENSORLG00000007040	si:dkey-17e16.10	80	80.357	ENSCLAG00000013286	MRPS12	81	80.357	Chinchilla_lanigera
ENSORLG00000007040	si:dkey-17e16.10	79	80.000	ENSCSAG00000003929	MRPS12	79	80.000	Chlorocebus_sabaeus
ENSORLG00000007040	si:dkey-17e16.10	61	84.884	ENSCHOG00000008451	MRPS12	62	84.884	Choloepus_hoffmanni
ENSORLG00000007040	si:dkey-17e16.10	82	82.609	ENSCPBG00000018941	MRPS12	74	82.609	Chrysemys_picta_bellii
ENSORLG00000007040	si:dkey-17e16.10	71	61.616	ENSCSAVG00000008777	-	52	61.616	Ciona_savignyi
ENSORLG00000007040	si:dkey-17e16.10	79	79.279	ENSCANG00000003652	MRPS12	80	79.279	Colobus_angolensis_palliatus
ENSORLG00000007040	si:dkey-17e16.10	80	79.464	ENSCGRG00001018968	Mrps12	81	79.464	Cricetulus_griseus_chok1gshd
ENSORLG00000007040	si:dkey-17e16.10	80	79.464	ENSCGRG00000007113	Mrps12	81	79.464	Cricetulus_griseus_crigri
ENSORLG00000007040	si:dkey-17e16.10	100	84.615	ENSCSEG00000001174	si:dkey-17e16.10	100	84.615	Cynoglossus_semilaevis
ENSORLG00000007040	si:dkey-17e16.10	100	90.909	ENSCVAG00000003253	si:dkey-17e16.10	100	90.909	Cyprinodon_variegatus
ENSORLG00000007040	si:dkey-17e16.10	100	76.923	ENSDARG00000089836	MRPS12	100	76.923	Danio_rerio
ENSORLG00000007040	si:dkey-17e16.10	80	83.036	ENSDNOG00000003918	MRPS12	81	83.036	Dasypus_novemcinctus
ENSORLG00000007040	si:dkey-17e16.10	97	69.343	ENSDORG00000001544	Mrps12	96	69.343	Dipodomys_ordii
ENSORLG00000007040	si:dkey-17e16.10	99	54.930	FBgn0003714	tko	98	57.857	Drosophila_melanogaster
ENSORLG00000007040	si:dkey-17e16.10	80	83.036	ENSETEG00000017985	MRPS12	81	83.036	Echinops_telfairi
ENSORLG00000007040	si:dkey-17e16.10	80	84.821	ENSEBUG00000003529	si:dkey-17e16.10	64	84.821	Eptatretus_burgeri
ENSORLG00000007040	si:dkey-17e16.10	80	82.143	ENSEASG00005019736	MRPS12	81	82.143	Equus_asinus_asinus
ENSORLG00000007040	si:dkey-17e16.10	80	82.143	ENSECAG00000013794	MRPS12	81	82.143	Equus_caballus
ENSORLG00000007040	si:dkey-17e16.10	63	63.636	ENSEEUG00000013868	MRPS12	87	63.636	Erinaceus_europaeus
ENSORLG00000007040	si:dkey-17e16.10	99	87.324	ENSELUG00000014973	si:dkey-17e16.10	99	87.324	Esox_lucius
ENSORLG00000007040	si:dkey-17e16.10	96	70.896	ENSFCAG00000014573	MRPS12	91	70.896	Felis_catus
ENSORLG00000007040	si:dkey-17e16.10	78	77.064	ENSFALG00000015276	MRPS12	95	77.064	Ficedula_albicollis
ENSORLG00000007040	si:dkey-17e16.10	80	79.464	ENSFDAG00000008482	MRPS12	81	79.464	Fukomys_damarensis
ENSORLG00000007040	si:dkey-17e16.10	100	87.324	ENSFHEG00000004575	si:dkey-17e16.10	100	87.324	Fundulus_heteroclitus
ENSORLG00000007040	si:dkey-17e16.10	79	95.495	ENSGMOG00000020611	si:dkey-17e16.10	100	95.495	Gadus_morhua
ENSORLG00000007040	si:dkey-17e16.10	79	82.883	ENSGALG00000038667	MRPS12	82	82.883	Gallus_gallus
ENSORLG00000007040	si:dkey-17e16.10	99	88.652	ENSGAFG00000007521	si:dkey-17e16.10	99	88.652	Gambusia_affinis
ENSORLG00000007040	si:dkey-17e16.10	97	80.882	ENSGACG00000003011	si:dkey-17e16.10	100	95.495	Gasterosteus_aculeatus
ENSORLG00000007040	si:dkey-17e16.10	79	85.586	ENSGAGG00000009748	MRPS12	73	84.211	Gopherus_agassizii
ENSORLG00000007040	si:dkey-17e16.10	79	79.091	ENSGGOG00000002500	MRPS12	80	79.091	Gorilla_gorilla
ENSORLG00000007040	si:dkey-17e16.10	100	90.141	ENSHBUG00000014480	si:dkey-17e16.10	100	90.141	Haplochromis_burtoni
ENSORLG00000007040	si:dkey-17e16.10	81	76.991	ENSHGLG00000014942	MRPS12	81	76.991	Heterocephalus_glaber_female
ENSORLG00000007040	si:dkey-17e16.10	81	76.991	ENSHGLG00100017710	MRPS12	81	76.991	Heterocephalus_glaber_male
ENSORLG00000007040	si:dkey-17e16.10	91	86.719	ENSHCOG00000010444	si:dkey-17e16.10	85	86.719	Hippocampus_comes
ENSORLG00000007040	si:dkey-17e16.10	100	85.315	ENSIPUG00000024651	MRPS12	100	85.315	Ictalurus_punctatus
ENSORLG00000007040	si:dkey-17e16.10	83	80.508	ENSSTOG00000009006	MRPS12	85	80.508	Ictidomys_tridecemlineatus
ENSORLG00000007040	si:dkey-17e16.10	80	78.571	ENSJJAG00000017837	Mrps12	81	78.571	Jaculus_jaculus
ENSORLG00000007040	si:dkey-17e16.10	100	88.112	ENSKMAG00000007949	si:dkey-17e16.10	91	88.112	Kryptolebias_marmoratus
ENSORLG00000007040	si:dkey-17e16.10	94	87.786	ENSLBEG00000001112	si:dkey-17e16.10	94	87.786	Labrus_bergylta
ENSORLG00000007040	si:dkey-17e16.10	80	89.286	ENSLACG00000018393	MRPS12	70	89.286	Latimeria_chalumnae
ENSORLG00000007040	si:dkey-17e16.10	100	70.748	ENSLOCG00000000535	si:dkey-17e16.10	100	70.748	Lepisosteus_oculatus
ENSORLG00000007040	si:dkey-17e16.10	99	68.310	ENSLAFG00000022140	MRPS12	99	68.310	Loxodonta_africana
ENSORLG00000007040	si:dkey-17e16.10	79	80.180	ENSMFAG00000044563	MRPS12	80	80.180	Macaca_fascicularis
ENSORLG00000007040	si:dkey-17e16.10	79	79.279	ENSMNEG00000040379	MRPS12	80	79.279	Macaca_nemestrina
ENSORLG00000007040	si:dkey-17e16.10	79	79.279	ENSMLEG00000036963	MRPS12	80	79.279	Mandrillus_leucophaeus
ENSORLG00000007040	si:dkey-17e16.10	100	90.714	ENSMAMG00000017962	si:dkey-17e16.10	100	90.714	Mastacembelus_armatus
ENSORLG00000007040	si:dkey-17e16.10	100	89.510	ENSMZEG00005017336	si:dkey-17e16.10	100	89.510	Maylandia_zebra
ENSORLG00000007040	si:dkey-17e16.10	79	81.982	ENSMGAG00000005414	MRPS12	78	81.982	Meleagris_gallopavo
ENSORLG00000007040	si:dkey-17e16.10	54	81.579	ENSMAUG00000019146	Mrps12	74	81.579	Mesocricetus_auratus
ENSORLG00000007040	si:dkey-17e16.10	80	81.250	ENSMICG00000045111	MRPS12	81	81.250	Microcebus_murinus
ENSORLG00000007040	si:dkey-17e16.10	97	71.324	ENSMOCG00000012666	Mrps12	96	71.324	Microtus_ochrogaster
ENSORLG00000007040	si:dkey-17e16.10	82	93.043	ENSMMOG00000010803	si:dkey-17e16.10	79	93.043	Mola_mola
ENSORLG00000007040	si:dkey-17e16.10	81	77.193	ENSMODG00000013431	MRPS12	78	77.193	Monodelphis_domestica
ENSORLG00000007040	si:dkey-17e16.10	100	86.014	ENSMALG00000004190	si:dkey-17e16.10	100	86.014	Monopterus_albus
ENSORLG00000007040	si:dkey-17e16.10	97	70.803	MGP_CAROLIEiJ_G0029457	Mrps12	97	73.554	Mus_caroli
ENSORLG00000007040	si:dkey-17e16.10	97	70.803	ENSMUSG00000045948	Mrps12	97	73.554	Mus_musculus
ENSORLG00000007040	si:dkey-17e16.10	96	73.134	MGP_PahariEiJ_G0012691	Mrps12	97	72.727	Mus_pahari
ENSORLG00000007040	si:dkey-17e16.10	97	70.803	MGP_SPRETEiJ_G0030553	Mrps12	97	73.554	Mus_spretus
ENSORLG00000007040	si:dkey-17e16.10	82	80.870	ENSMPUG00000017750	MRPS12	86	80.870	Mustela_putorius_furo
ENSORLG00000007040	si:dkey-17e16.10	80	81.250	ENSMLUG00000006076	MRPS12	81	81.250	Myotis_lucifugus
ENSORLG00000007040	si:dkey-17e16.10	85	78.151	ENSNGAG00000022099	Mrps12	91	73.881	Nannospalax_galili
ENSORLG00000007040	si:dkey-17e16.10	100	89.510	ENSNBRG00000007244	si:dkey-17e16.10	100	89.510	Neolamprologus_brichardi
ENSORLG00000007040	si:dkey-17e16.10	79	73.874	ENSMEUG00000005688	MRPS12	99	73.874	Notamacropus_eugenii
ENSORLG00000007040	si:dkey-17e16.10	99	68.310	ENSODEG00000016161	MRPS12	99	68.310	Octodon_degus
ENSORLG00000007040	si:dkey-17e16.10	100	88.811	ENSONIG00000002022	si:dkey-17e16.10	100	88.811	Oreochromis_niloticus
ENSORLG00000007040	si:dkey-17e16.10	95	72.932	ENSOCUG00000000689	MRPS12	91	72.932	Oryctolagus_cuniculus
ENSORLG00000007040	si:dkey-17e16.10	100	100.000	ENSORLG00020011268	MRPS12	100	100.000	Oryzias_latipes_hni
ENSORLG00000007040	si:dkey-17e16.10	100	100.000	ENSORLG00015009378	MRPS12	100	100.000	Oryzias_latipes_hsok
ENSORLG00000007040	si:dkey-17e16.10	100	97.857	ENSOMEG00000001427	si:dkey-17e16.10	100	97.857	Oryzias_melastigma
ENSORLG00000007040	si:dkey-17e16.10	80	74.107	ENSOGAG00000025634	-	81	74.107	Otolemur_garnettii
ENSORLG00000007040	si:dkey-17e16.10	96	73.134	ENSOGAG00000008295	-	91	73.134	Otolemur_garnettii
ENSORLG00000007040	si:dkey-17e16.10	83	78.448	ENSOARG00000005927	MRPS12	83	78.448	Ovis_aries
ENSORLG00000007040	si:dkey-17e16.10	79	79.091	ENSPPAG00000041637	MRPS12	80	79.091	Pan_paniscus
ENSORLG00000007040	si:dkey-17e16.10	96	71.642	ENSPPRG00000011742	MRPS12	91	71.642	Panthera_pardus
ENSORLG00000007040	si:dkey-17e16.10	63	84.091	ENSPTIG00000008427	MRPS12	73	83.333	Panthera_tigris_altaica
ENSORLG00000007040	si:dkey-17e16.10	79	79.091	ENSPTRG00000010948	MRPS12	80	79.091	Pan_troglodytes
ENSORLG00000007040	si:dkey-17e16.10	79	79.279	ENSPANG00000021673	MRPS12	80	79.279	Papio_anubis
ENSORLG00000007040	si:dkey-17e16.10	100	77.857	ENSPKIG00000006716	si:dkey-17e16.10	98	77.857	Paramormyrops_kingsleyae
ENSORLG00000007040	si:dkey-17e16.10	82	84.348	ENSPSIG00000014383	MRPS12	75	84.348	Pelodiscus_sinensis
ENSORLG00000007040	si:dkey-17e16.10	100	79.577	ENSPMGG00000009631	si:dkey-17e16.10	100	79.577	Periophthalmus_magnuspinnatus
ENSORLG00000007040	si:dkey-17e16.10	80	82.143	ENSPEMG00000016700	Mrps12	81	82.143	Peromyscus_maniculatus_bairdii
ENSORLG00000007040	si:dkey-17e16.10	88	69.919	ENSPMAG00000008051	si:dkey-17e16.10	79	69.919	Petromyzon_marinus
ENSORLG00000007040	si:dkey-17e16.10	98	67.606	ENSPCIG00000010531	-	97	67.606	Phascolarctos_cinereus
ENSORLG00000007040	si:dkey-17e16.10	100	86.014	ENSPFOG00000018863	si:dkey-17e16.10	100	86.014	Poecilia_formosa
ENSORLG00000007040	si:dkey-17e16.10	100	86.014	ENSPLAG00000008933	si:dkey-17e16.10	100	86.014	Poecilia_latipinna
ENSORLG00000007040	si:dkey-17e16.10	100	86.014	ENSPMEG00000005155	si:dkey-17e16.10	95	86.014	Poecilia_mexicana
ENSORLG00000007040	si:dkey-17e16.10	99	86.525	ENSPREG00000014123	si:dkey-17e16.10	95	86.525	Poecilia_reticulata
ENSORLG00000007040	si:dkey-17e16.10	79	79.091	ENSPPYG00000009950	MRPS12	80	79.091	Pongo_abelii
ENSORLG00000007040	si:dkey-17e16.10	99	69.718	ENSPCAG00000010853	MRPS12	100	69.718	Procavia_capensis
ENSORLG00000007040	si:dkey-17e16.10	80	81.250	ENSPCOG00000020370	MRPS12	81	81.250	Propithecus_coquereli
ENSORLG00000007040	si:dkey-17e16.10	99	67.376	ENSPVAG00000011605	MRPS12	99	67.376	Pteropus_vampyrus
ENSORLG00000007040	si:dkey-17e16.10	100	89.510	ENSPNYG00000015506	si:dkey-17e16.10	95	89.510	Pundamilia_nyererei
ENSORLG00000007040	si:dkey-17e16.10	81	89.381	ENSPNAG00000016315	si:dkey-17e16.10	76	89.381	Pygocentrus_nattereri
ENSORLG00000007040	si:dkey-17e16.10	80	82.143	ENSRNOG00000019949	Mrps12	81	82.143	Rattus_norvegicus
ENSORLG00000007040	si:dkey-17e16.10	79	79.279	ENSRBIG00000029741	MRPS12	80	79.279	Rhinopithecus_bieti
ENSORLG00000007040	si:dkey-17e16.10	79	79.279	ENSRROG00000030787	MRPS12	80	79.279	Rhinopithecus_roxellana
ENSORLG00000007040	si:dkey-17e16.10	79	80.180	ENSSBOG00000025707	MRPS12	80	80.180	Saimiri_boliviensis_boliviensis
ENSORLG00000007040	si:dkey-17e16.10	100	75.000	ENSSFOG00015018102	mrps12	98	75.000	Scleropages_formosus
ENSORLG00000007040	si:dkey-17e16.10	100	86.713	ENSSMAG00000004249	si:dkey-17e16.10	100	86.713	Scophthalmus_maximus
ENSORLG00000007040	si:dkey-17e16.10	100	88.811	ENSSDUG00000020424	si:dkey-17e16.10	99	88.811	Seriola_dumerili
ENSORLG00000007040	si:dkey-17e16.10	100	88.811	ENSSLDG00000016320	si:dkey-17e16.10	99	88.811	Seriola_lalandi_dorsalis
ENSORLG00000007040	si:dkey-17e16.10	83	78.448	ENSSARG00000006985	MRPS12	83	78.448	Sorex_araneus
ENSORLG00000007040	si:dkey-17e16.10	98	71.127	ENSSPUG00000004675	MRPS12	90	71.127	Sphenodon_punctatus
ENSORLG00000007040	si:dkey-17e16.10	100	85.315	ENSSPAG00000012951	si:dkey-17e16.10	100	85.315	Stegastes_partitus
ENSORLG00000007040	si:dkey-17e16.10	83	79.310	ENSSSCG00000031860	MRPS12	91	79.310	Sus_scrofa
ENSORLG00000007040	si:dkey-17e16.10	79	77.273	ENSTGUG00000016491	MRPS12	100	77.273	Taeniopygia_guttata
ENSORLG00000007040	si:dkey-17e16.10	86	90.000	ENSTRUG00000017342	si:dkey-17e16.10	85	90.000	Takifugu_rubripes
ENSORLG00000007040	si:dkey-17e16.10	87	88.525	ENSTNIG00000004898	si:dkey-17e16.10	89	88.525	Tetraodon_nigroviridis
ENSORLG00000007040	si:dkey-17e16.10	80	81.250	ENSTBEG00000001288	MRPS12	81	81.250	Tupaia_belangeri
ENSORLG00000007040	si:dkey-17e16.10	99	71.429	ENSTTRG00000011794	MRPS12	99	71.429	Tursiops_truncatus
ENSORLG00000007040	si:dkey-17e16.10	80	78.571	ENSUAMG00000011626	MRPS12	81	78.571	Ursus_americanus
ENSORLG00000007040	si:dkey-17e16.10	80	80.357	ENSUMAG00000019235	MRPS12	81	80.357	Ursus_maritimus
ENSORLG00000007040	si:dkey-17e16.10	99	73.050	ENSVVUG00000006433	MRPS12	70	73.050	Vulpes_vulpes
ENSORLG00000007040	si:dkey-17e16.10	96	71.739	ENSXETG00000005326	mrps12	93	71.739	Xenopus_tropicalis
ENSORLG00000007040	si:dkey-17e16.10	99	89.362	ENSXCOG00000020766	si:dkey-17e16.10	95	89.362	Xiphophorus_couchianus
ENSORLG00000007040	si:dkey-17e16.10	99	89.362	ENSXMAG00000027119	si:dkey-17e16.10	99	89.362	Xiphophorus_maculatus