EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000007107 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain-helicase-DNA-binding protein 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 35126 bases
Position: chr18:17511739-17546864
Accession: 101167742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000008921	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000008922	-	4812	XM_023949023	ENSORLP00000008921	1603 (aa)	XP_023804791	H2LS61

Gene Model

Click here to download ENSORLG00000007107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007107's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000007107	chd3	91	65.946	ENSORLG00000012477	-	85	65.497
ENSORLG00000007107	chd3	91	67.576	ENSORLG00000017190	-	83	67.611
ENSORLG00000007107	chd3	89	66.931	ENSORLG00000006310	chd4a	77	66.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007107	chd3	93	71.911	ENSG00000170004	CHD3	99	65.121	Homo_sapiens
ENSORLG00000007107	chd3	88	86.382	ENSAPOG00000005614	chd3	88	86.391	Acanthochromis_polyacanthus
ENSORLG00000007107	chd3	61	75.253	ENSAMEG00000003025	-	79	75.184	Ailuropoda_melanoleuca
ENSORLG00000007107	chd3	88	85.656	ENSACIG00000019671	chd3	90	86.468	Amphilophus_citrinellus
ENSORLG00000007107	chd3	91	89.449	ENSAOCG00000023784	chd3	90	86.177	Amphiprion_ocellaris
ENSORLG00000007107	chd3	91	89.382	ENSAPEG00000006341	chd3	79	89.104	Amphiprion_percula
ENSORLG00000007107	chd3	90	89.392	ENSATEG00000000848	chd3	90	81.740	Anabas_testudineus
ENSORLG00000007107	chd3	91	72.649	ENSACAG00000004276	CHD3	77	72.429	Anolis_carolinensis
ENSORLG00000007107	chd3	85	76.256	ENSANAG00000034323	CHD3	84	71.579	Aotus_nancymaae
ENSORLG00000007107	chd3	93	84.026	ENSACLG00000009222	chd3	92	86.136	Astatotilapia_calliptera
ENSORLG00000007107	chd3	93	70.560	ENSBTAG00000014377	CHD3	83	70.507	Bos_taurus
ENSORLG00000007107	chd3	93	71.973	ENSCJAG00000014766	CHD3	81	72.096	Callithrix_jacchus
ENSORLG00000007107	chd3	93	71.049	ENSCAFG00000016859	CHD3	82	70.869	Canis_familiaris
ENSORLG00000007107	chd3	91	73.089	ENSCAFG00020007422	CHD3	84	72.963	Canis_lupus_dingo
ENSORLG00000007107	chd3	87	75.668	ENSCHIG00000016737	CHD3	82	70.386	Capra_hircus
ENSORLG00000007107	chd3	93	71.850	ENSTSYG00000035658	CHD3	84	68.987	Carlito_syrichta
ENSORLG00000007107	chd3	93	67.793	ENSCAPG00000014864	CHD3	81	67.730	Cavia_aperea
ENSORLG00000007107	chd3	93	70.627	ENSCPOG00000022653	CHD3	81	70.560	Cavia_porcellus
ENSORLG00000007107	chd3	93	71.973	ENSCCAG00000034792	CHD3	82	70.716	Cebus_capucinus
ENSORLG00000007107	chd3	93	71.789	ENSCATG00000041717	CHD3	81	71.727	Cercocebus_atys
ENSORLG00000007107	chd3	93	71.858	ENSCLAG00000010523	CHD3	83	71.674	Chinchilla_lanigera
ENSORLG00000007107	chd3	87	75.938	ENSCSAG00000011122	CHD3	83	70.780	Chlorocebus_sabaeus
ENSORLG00000007107	chd3	93	76.387	ENSCPBG00000011966	CHD3	95	77.778	Chrysemys_picta_bellii
ENSORLG00000007107	chd3	93	71.789	ENSCANG00000037641	CHD3	81	71.666	Colobus_angolensis_palliatus
ENSORLG00000007107	chd3	93	71.253	ENSCGRG00001011306	Chd3	83	71.376	Cricetulus_griseus_chok1gshd
ENSORLG00000007107	chd3	93	66.118	ENSCGRG00000007878	Chd3	82	69.782	Cricetulus_griseus_crigri
ENSORLG00000007107	chd3	93	88.125	ENSCSEG00000004489	chd3	87	88.384	Cynoglossus_semilaevis
ENSORLG00000007107	chd3	93	83.654	ENSCVAG00000007293	chd3	88	83.770	Cyprinodon_variegatus
ENSORLG00000007107	chd3	93	79.185	ENSDARG00000021405	chd3	84	79.607	Danio_rerio
ENSORLG00000007107	chd3	85	76.758	ENSDNOG00000047846	CHD3	75	76.609	Dasypus_novemcinctus
ENSORLG00000007107	chd3	93	71.911	ENSDORG00000010713	Chd3	83	71.789	Dipodomys_ordii
ENSORLG00000007107	chd3	93	66.124	ENSETEG00000017733	CHD3	82	67.183	Echinops_telfairi
ENSORLG00000007107	chd3	64	74.378	ENSEBUG00000008310	chd3	70	74.194	Eptatretus_burgeri
ENSORLG00000007107	chd3	88	71.447	ENSEASG00005019360	CHD3	85	71.546	Equus_asinus_asinus
ENSORLG00000007107	chd3	88	71.465	ENSECAG00000010051	CHD3	85	71.546	Equus_caballus
ENSORLG00000007107	chd3	88	69.332	ENSEEUG00000015205	CHD3	73	70.612	Erinaceus_europaeus
ENSORLG00000007107	chd3	82	81.123	ENSELUG00000019499	chd3	90	81.716	Esox_lucius
ENSORLG00000007107	chd3	93	70.929	ENSFCAG00000009629	CHD3	79	70.542	Felis_catus
ENSORLG00000007107	chd3	91	71.570	ENSFDAG00000008220	CHD3	80	71.252	Fukomys_damarensis
ENSORLG00000007107	chd3	86	83.030	ENSGMOG00000013599	chd3	76	83.636	Gadus_morhua
ENSORLG00000007107	chd3	68	85.488	ENSGAFG00000004055	chd3	99	87.234	Gambusia_affinis
ENSORLG00000007107	chd3	95	73.990	ENSGACG00000019275	chd3	83	74.180	Gasterosteus_aculeatus
ENSORLG00000007107	chd3	83	74.228	ENSGAGG00000013164	CHD3	96	73.888	Gopherus_agassizii
ENSORLG00000007107	chd3	93	72.034	ENSGGOG00000013496	CHD3	81	71.850	Gorilla_gorilla
ENSORLG00000007107	chd3	93	72.034	ENSHGLG00000012017	CHD3	82	70.265	Heterocephalus_glaber_female
ENSORLG00000007107	chd3	80	64.583	ENSHGLG00100013902	CHD3	82	64.583	Heterocephalus_glaber_male
ENSORLG00000007107	chd3	91	84.620	ENSHCOG00000010170	chd3	78	84.818	Hippocampus_comes
ENSORLG00000007107	chd3	83	85.516	ENSIPUG00000003271	chd3	80	85.735	Ictalurus_punctatus
ENSORLG00000007107	chd3	93	72.202	ENSSTOG00000025907	CHD3	83	72.017	Ictidomys_tridecemlineatus
ENSORLG00000007107	chd3	96	71.463	ENSJJAG00000017633	Chd3	83	72.034	Jaculus_jaculus
ENSORLG00000007107	chd3	87	90.516	ENSKMAG00000019292	chd3	79	90.028	Kryptolebias_marmoratus
ENSORLG00000007107	chd3	98	83.200	ENSLBEG00000028485	chd3	81	84.492	Labrus_bergylta
ENSORLG00000007107	chd3	84	73.595	ENSLACG00000008031	CHD3	83	68.848	Latimeria_chalumnae
ENSORLG00000007107	chd3	90	80.691	ENSLOCG00000013965	chd3	74	81.504	Lepisosteus_oculatus
ENSORLG00000007107	chd3	93	70.115	ENSLAFG00000000572	CHD3	86	70.321	Loxodonta_africana
ENSORLG00000007107	chd3	93	71.789	ENSMFAG00000020113	CHD3	84	69.695	Macaca_fascicularis
ENSORLG00000007107	chd3	93	69.515	ENSMMUG00000022221	CHD3	82	69.710	Macaca_mulatta
ENSORLG00000007107	chd3	93	71.727	ENSMNEG00000001728	CHD3	84	70.966	Macaca_nemestrina
ENSORLG00000007107	chd3	93	71.789	ENSMLEG00000032249	CHD3	81	71.727	Mandrillus_leucophaeus
ENSORLG00000007107	chd3	88	84.462	ENSMAMG00000000564	chd3	90	84.462	Mastacembelus_armatus
ENSORLG00000007107	chd3	93	71.130	ENSMAUG00000013873	Chd3	84	69.880	Mesocricetus_auratus
ENSORLG00000007107	chd3	93	71.110	ENSMICG00000008741	CHD3	79	70.748	Microcebus_murinus
ENSORLG00000007107	chd3	93	71.253	ENSMOCG00000004848	Chd3	83	71.376	Microtus_ochrogaster
ENSORLG00000007107	chd3	93	83.531	ENSMMOG00000012699	chd3	87	82.658	Mola_mola
ENSORLG00000007107	chd3	88	73.147	ENSMODG00000007509	CHD3	84	73.082	Monodelphis_domestica
ENSORLG00000007107	chd3	93	72.140	MGP_CAROLIEiJ_G0016564	Chd3	85	71.648	Mus_caroli
ENSORLG00000007107	chd3	93	71.692	ENSMUSG00000018474	Chd3	85	71.323	Mus_musculus
ENSORLG00000007107	chd3	93	72.113	MGP_PahariEiJ_G0017695	Chd3	85	71.806	Mus_pahari
ENSORLG00000007107	chd3	93	71.692	MGP_SPRETEiJ_G0017400	Chd3	85	71.323	Mus_spretus
ENSORLG00000007107	chd3	76	78.072	ENSMPUG00000008861	CHD3	83	71.724	Mustela_putorius_furo
ENSORLG00000007107	chd3	93	69.940	ENSMLUG00000014643	-	82	69.783	Myotis_lucifugus
ENSORLG00000007107	chd3	93	70.904	ENSNGAG00000000773	Chd3	81	70.620	Nannospalax_galili
ENSORLG00000007107	chd3	88	85.493	ENSNBRG00000000636	chd3	88	86.505	Neolamprologus_brichardi
ENSORLG00000007107	chd3	87	74.782	ENSNLEG00000009770	CHD3	77	74.314	Nomascus_leucogenys
ENSORLG00000007107	chd3	77	78.205	ENSMEUG00000005852	CHD3	68	78.205	Notamacropus_eugenii
ENSORLG00000007107	chd3	91	71.943	ENSOPRG00000011069	CHD3	85	71.633	Ochotona_princeps
ENSORLG00000007107	chd3	93	70.688	ENSODEG00000017785	CHD3	82	70.705	Octodon_degus
ENSORLG00000007107	chd3	93	83.384	ENSONIG00000009292	chd3	85	83.628	Oreochromis_niloticus
ENSORLG00000007107	chd3	93	69.837	ENSOCUG00000029299	CHD3	83	69.356	Oryctolagus_cuniculus
ENSORLG00000007107	chd3	65	87.558	ENSORLG00020008387	chd3	94	87.558	Oryzias_latipes_hni
ENSORLG00000007107	chd3	88	86.264	ENSOMEG00000013691	chd3	90	87.110	Oryzias_melastigma
ENSORLG00000007107	chd3	93	70.688	ENSOGAG00000003216	CHD3	83	70.326	Otolemur_garnettii
ENSORLG00000007107	chd3	87	75.220	ENSOARG00000017855	CHD3	81	70.061	Ovis_aries
ENSORLG00000007107	chd3	93	70.121	ENSPPAG00000032886	CHD3	84	68.461	Pan_paniscus
ENSORLG00000007107	chd3	93	71.983	ENSPPRG00000000626	CHD3	81	71.736	Panthera_pardus
ENSORLG00000007107	chd3	93	71.911	ENSPTRG00000008714	CHD3	81	71.973	Pan_troglodytes
ENSORLG00000007107	chd3	93	70.006	ENSPANG00000023938	CHD3	84	69.695	Papio_anubis
ENSORLG00000007107	chd3	93	81.860	ENSPKIG00000006305	chd3	83	78.011	Paramormyrops_kingsleyae
ENSORLG00000007107	chd3	63	76.763	ENSPSIG00000010177	CHD3	93	79.301	Pelodiscus_sinensis
ENSORLG00000007107	chd3	93	70.181	ENSPEMG00000014262	Chd3	82	70.301	Peromyscus_maniculatus_bairdii
ENSORLG00000007107	chd3	91	76.236	ENSPCIG00000005442	CHD3	85	74.166	Phascolarctos_cinereus
ENSORLG00000007107	chd3	90	88.334	ENSPFOG00000012464	chd3	77	87.575	Poecilia_formosa
ENSORLG00000007107	chd3	93	86.869	ENSPLAG00000002887	chd3	91	84.422	Poecilia_latipinna
ENSORLG00000007107	chd3	64	82.633	ENSPMEG00000016725	chd3	90	85.061	Poecilia_mexicana
ENSORLG00000007107	chd3	93	83.472	ENSPREG00000011044	chd3	82	84.237	Poecilia_reticulata
ENSORLG00000007107	chd3	93	68.135	ENSPPYG00000007940	CHD3	83	67.713	Pongo_abelii
ENSORLG00000007107	chd3	82	83.766	ENSPCAG00000004350	CHD3	79	74.771	Procavia_capensis
ENSORLG00000007107	chd3	93	71.973	ENSPCOG00000020952	CHD3	82	70.705	Propithecus_coquereli
ENSORLG00000007107	chd3	75	70.672	ENSPVAG00000016344	CHD3	68	70.918	Pteropus_vampyrus
ENSORLG00000007107	chd3	92	83.912	ENSPNAG00000020393	chd3	84	80.933	Pygocentrus_nattereri
ENSORLG00000007107	chd3	88	71.501	ENSRNOG00000009722	Chd3	84	71.311	Rattus_norvegicus
ENSORLG00000007107	chd3	93	69.492	ENSRBIG00000033562	CHD3	84	69.086	Rhinopithecus_bieti
ENSORLG00000007107	chd3	93	71.789	ENSRROG00000029554	CHD3	85	69.557	Rhinopithecus_roxellana
ENSORLG00000007107	chd3	93	71.973	ENSSBOG00000020719	CHD3	84	71.013	Saimiri_boliviensis_boliviensis
ENSORLG00000007107	chd3	93	71.798	ENSSHAG00000014412	CHD3	83	71.552	Sarcophilus_harrisii
ENSORLG00000007107	chd3	84	79.964	ENSSFOG00015023123	chd3	81	79.732	Scleropages_formosus
ENSORLG00000007107	chd3	88	87.279	ENSSMAG00000006451	chd3	90	84.024	Scophthalmus_maximus
ENSORLG00000007107	chd3	63	85.660	ENSSDUG00000005792	chd3	95	85.660	Seriola_dumerili
ENSORLG00000007107	chd3	93	89.718	ENSSPAG00000013694	chd3	89	84.345	Stegastes_partitus
ENSORLG00000007107	chd3	93	72.229	ENSSSCG00000021363	CHD3	91	71.655	Sus_scrofa
ENSORLG00000007107	chd3	87	90.664	ENSTRUG00000014990	chd3	88	90.318	Takifugu_rubripes
ENSORLG00000007107	chd3	93	82.221	ENSTNIG00000012998	chd3	83	81.949	Tetraodon_nigroviridis
ENSORLG00000007107	chd3	62	84.038	ENSTBEG00000011454	-	57	84.038	Tupaia_belangeri
ENSORLG00000007107	chd3	91	74.590	ENSTTRG00000010295	CHD3	77	73.541	Tursiops_truncatus
ENSORLG00000007107	chd3	93	72.124	ENSUAMG00000005475	CHD3	86	71.555	Ursus_americanus
ENSORLG00000007107	chd3	57	89.783	ENSVPAG00000010794	-	56	89.783	Vicugna_pacos
ENSORLG00000007107	chd3	93	72.079	ENSVVUG00000028011	CHD3	83	71.773	Vulpes_vulpes
ENSORLG00000007107	chd3	95	62.908	ENSXETG00000012991	chd3	78	64.761	Xenopus_tropicalis
ENSORLG00000007107	chd3	71	82.638	ENSXCOG00000000809	chd3	99	82.638	Xiphophorus_couchianus
ENSORLG00000007107	chd3	88	81.837	ENSXMAG00000016035	chd3	90	82.444	Xiphophorus_maculatus