EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000007156 (Gene tree)
Gene ID: -
Gene Symbol: gatc
Alias: -
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 5176 bases
Position: chr9:12991320-12996495
Accession: 101167797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000030062	Glu-tRNAGln	PF02686.15	7.6e-10	1	1
ENSORLP00000008975	Glu-tRNAGln	PF02686.15	8.1e-10	1	1
ENSORLP00000041606	Glu-tRNAGln	PF02686.15	8.7e-10	1	1
ENSORLP00000008974	Glu-tRNAGln	PF02686.15	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000029014	-	381	-	ENSORLP00000030062	126 (aa)	-	-
ENSORLT00000008976	-	366	XM_020705945	ENSORLP00000008975	121 (aa)	XP_020561604	H2LSB4
ENSORLT00000008975	-	408	-	ENSORLP00000008974	135 (aa)	-	H2LSB3
ENSORLT00000042163	-	333	-	ENSORLP00000041606	110 (aa)	-	-

Gene Model

Click here to download ENSORLG00000007156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007156	gatc	83	64.835	ENSG00000257218	GATC	100	68.085	Homo_sapiens
ENSORLG00000007156	gatc	83	63.736	ENSAMEG00000013298	-	88	50.833	Ailuropoda_melanoleuca
ENSORLG00000007156	gatc	77	84.946	ENSACIG00000016853	gatc	67	84.946	Amphilophus_citrinellus
ENSORLG00000007156	gatc	100	85.950	ENSAOCG00000014641	gatc	97	85.950	Amphiprion_ocellaris
ENSORLG00000007156	gatc	100	86.777	ENSAPEG00000023411	gatc	62	86.777	Amphiprion_percula
ENSORLG00000007156	gatc	77	82.796	ENSATEG00000009237	gatc	77	82.796	Anabas_testudineus
ENSORLG00000007156	gatc	91	65.000	ENSACAG00000002868	-	90	56.557	Anolis_carolinensis
ENSORLG00000007156	gatc	83	65.934	ENSANAG00000034389	-	95	51.880	Aotus_nancymaae
ENSORLG00000007156	gatc	100	80.992	ENSACLG00000026251	gatc	63	80.992	Astatotilapia_calliptera
ENSORLG00000007156	gatc	100	74.380	ENSAMXG00000004252	gatc	53	74.380	Astyanax_mexicanus
ENSORLG00000007156	gatc	83	61.538	ENSBTAG00000012791	GATC	73	57.576	Bos_taurus
ENSORLG00000007156	gatc	89	41.284	WBGene00013433	Y66D12A.7	62	41.284	Caenorhabditis_elegans
ENSORLG00000007156	gatc	83	65.934	ENSCJAG00000001183	-	70	53.435	Callithrix_jacchus
ENSORLG00000007156	gatc	83	64.835	ENSCAFG00000010311	-	86	52.991	Canis_familiaris
ENSORLG00000007156	gatc	83	64.835	ENSCAFG00020020606	-	86	52.991	Canis_lupus_dingo
ENSORLG00000007156	gatc	88	58.763	ENSCHIG00000019423	-	79	54.206	Capra_hircus
ENSORLG00000007156	gatc	83	64.835	ENSTSYG00000006845	-	93	51.145	Carlito_syrichta
ENSORLG00000007156	gatc	74	65.432	ENSCPOG00000026436	-	61	60.674	Cavia_porcellus
ENSORLG00000007156	gatc	83	65.934	ENSCCAG00000022235	-	95	51.880	Cebus_capucinus
ENSORLG00000007156	gatc	83	64.835	ENSCATG00000038807	GATC	95	50.376	Cercocebus_atys
ENSORLG00000007156	gatc	79	64.368	ENSCLAG00000011015	-	73	51.724	Chinchilla_lanigera
ENSORLG00000007156	gatc	83	64.835	ENSCSAG00000002259	GATC	95	50.376	Chlorocebus_sabaeus
ENSORLG00000007156	gatc	83	65.934	ENSCHOG00000009235	-	82	57.658	Choloepus_hoffmanni
ENSORLG00000007156	gatc	90	69.697	ENSCPBG00000011342	-	62	63.793	Chrysemys_picta_bellii
ENSORLG00000007156	gatc	83	64.835	ENSCANG00000031071	GATC	73	60.606	Colobus_angolensis_palliatus
ENSORLG00000007156	gatc	78	63.953	ENSCGRG00001019220	-	62	58.333	Cricetulus_griseus_chok1gshd
ENSORLG00000007156	gatc	78	63.953	ENSCGRG00000004184	-	62	58.333	Cricetulus_griseus_crigri
ENSORLG00000007156	gatc	98	79.832	ENSCSEG00000007798	gatc	60	79.832	Cynoglossus_semilaevis
ENSORLG00000007156	gatc	90	76.147	ENSCSEG00000016618	-	64	76.147	Cynoglossus_semilaevis
ENSORLG00000007156	gatc	100	80.992	ENSCVAG00000004364	gatc	64	80.992	Cyprinodon_variegatus
ENSORLG00000007156	gatc	100	72.727	ENSDARG00000056855	gatc	66	72.727	Danio_rerio
ENSORLG00000007156	gatc	82	65.556	ENSDNOG00000012593	-	55	59.341	Dasypus_novemcinctus
ENSORLG00000007156	gatc	77	44.706	FBgn0064115	GatC	74	40.000	Drosophila_melanogaster
ENSORLG00000007156	gatc	88	52.577	ENSETEG00000002604	-	93	46.094	Echinops_telfairi
ENSORLG00000007156	gatc	82	46.465	ENSEBUG00000008772	gatc	57	46.000	Eptatretus_burgeri
ENSORLG00000007156	gatc	91	60.000	ENSECAG00000011118	-	73	60.606	Equus_caballus
ENSORLG00000007156	gatc	82	60.000	ENSEEUG00000011638	-	73	55.102	Erinaceus_europaeus
ENSORLG00000007156	gatc	92	69.565	ENSELUG00000012608	gatc	82	68.696	Esox_lucius
ENSORLG00000007156	gatc	83	63.736	ENSFCAG00000038718	-	73	58.586	Felis_catus
ENSORLG00000007156	gatc	90	65.657	ENSFALG00000007564	-	78	57.143	Ficedula_albicollis
ENSORLG00000007156	gatc	89	64.286	ENSFDAG00000018720	-	79	60.185	Fukomys_damarensis
ENSORLG00000007156	gatc	100	81.818	ENSFHEG00000014992	GATC	65	81.818	Fundulus_heteroclitus
ENSORLG00000007156	gatc	100	70.248	ENSGMOG00000008742	gatc	74	70.248	Gadus_morhua
ENSORLG00000007156	gatc	89	65.306	ENSGALG00000007195	-	90	54.198	Gallus_gallus
ENSORLG00000007156	gatc	84	81.373	ENSGAFG00000012801	gatc	65	81.373	Gambusia_affinis
ENSORLG00000007156	gatc	100	77.686	ENSGACG00000008973	gatc	62	77.686	Gasterosteus_aculeatus
ENSORLG00000007156	gatc	90	70.707	ENSGAGG00000016018	-	64	64.655	Gopherus_agassizii
ENSORLG00000007156	gatc	75	64.634	ENSGGOG00000026821	GATC	93	49.194	Gorilla_gorilla
ENSORLG00000007156	gatc	100	81.818	ENSHBUG00000006827	gatc	63	81.818	Haplochromis_burtoni
ENSORLG00000007156	gatc	89	63.265	ENSHGLG00000011394	GATC	99	50.735	Heterocephalus_glaber_female
ENSORLG00000007156	gatc	89	61.224	ENSHGLG00100018850	-	99	49.265	Heterocephalus_glaber_male
ENSORLG00000007156	gatc	100	74.380	ENSHCOG00000009209	gatc	94	74.380	Hippocampus_comes
ENSORLG00000007156	gatc	100	76.860	ENSIPUG00000023072	gatc	56	77.477	Ictalurus_punctatus
ENSORLG00000007156	gatc	83	63.736	ENSSTOG00000025740	-	84	51.128	Ictidomys_tridecemlineatus
ENSORLG00000007156	gatc	79	65.517	ENSJJAG00000000369	Gatc	82	51.938	Jaculus_jaculus
ENSORLG00000007156	gatc	100	72.727	ENSKMAG00000016476	gatc	93	72.727	Kryptolebias_marmoratus
ENSORLG00000007156	gatc	99	76.667	ENSLBEG00000007603	gatc	66	76.667	Labrus_bergylta
ENSORLG00000007156	gatc	96	58.621	ENSLACG00000018239	-	60	58.621	Latimeria_chalumnae
ENSORLG00000007156	gatc	100	72.727	ENSLOCG00000004056	gatc	65	72.727	Lepisosteus_oculatus
ENSORLG00000007156	gatc	74	65.432	ENSLAFG00000006384	-	59	60.440	Loxodonta_africana
ENSORLG00000007156	gatc	83	64.835	ENSMFAG00000034197	GATC	95	50.376	Macaca_fascicularis
ENSORLG00000007156	gatc	83	64.835	ENSMMUG00000046665	GATC	95	50.376	Macaca_mulatta
ENSORLG00000007156	gatc	83	64.835	ENSMNEG00000034653	GATC	95	50.376	Macaca_nemestrina
ENSORLG00000007156	gatc	83	65.934	ENSMLEG00000039862	GATC	95	51.128	Mandrillus_leucophaeus
ENSORLG00000007156	gatc	100	80.165	ENSMAMG00000015851	gatc	66	80.165	Mastacembelus_armatus
ENSORLG00000007156	gatc	100	80.992	ENSMZEG00005016072	gatc	63	80.992	Maylandia_zebra
ENSORLG00000007156	gatc	89	65.306	ENSMGAG00000008733	-	100	61.321	Meleagris_gallopavo
ENSORLG00000007156	gatc	78	65.116	ENSMAUG00000012756	Gatc	61	60.000	Mesocricetus_auratus
ENSORLG00000007156	gatc	83	65.934	ENSMICG00000008669	-	95	51.880	Microcebus_murinus
ENSORLG00000007156	gatc	78	63.953	ENSMOCG00000005051	Gatc	62	58.333	Microtus_ochrogaster
ENSORLG00000007156	gatc	91	76.364	ENSMMOG00000017695	gatc	92	76.364	Mola_mola
ENSORLG00000007156	gatc	83	63.736	ENSMODG00000003152	-	77	58.416	Monodelphis_domestica
ENSORLG00000007156	gatc	78	66.279	MGP_CAROLIEiJ_G0027623	Gatc	62	60.417	Mus_caroli
ENSORLG00000007156	gatc	78	66.279	ENSMUSG00000029536	Gatc	62	60.417	Mus_musculus
ENSORLG00000007156	gatc	78	67.442	MGP_PahariEiJ_G0024203	Gatc	67	58.654	Mus_pahari
ENSORLG00000007156	gatc	78	65.116	MGP_SPRETEiJ_G0028621	Gatc	62	59.375	Mus_spretus
ENSORLG00000007156	gatc	83	64.835	ENSMPUG00000003183	-	73	59.596	Mustela_putorius_furo
ENSORLG00000007156	gatc	83	60.440	ENSMLUG00000010341	-	94	58.947	Myotis_lucifugus
ENSORLG00000007156	gatc	76	64.286	ENSNGAG00000004734	Gatc	62	58.511	Nannospalax_galili
ENSORLG00000007156	gatc	100	81.818	ENSNBRG00000007810	gatc	63	81.818	Neolamprologus_brichardi
ENSORLG00000007156	gatc	91	56.364	ENSNLEG00000015651	GATC	95	51.938	Nomascus_leucogenys
ENSORLG00000007156	gatc	83	64.835	ENSMEUG00000004064	-	94	53.448	Notamacropus_eugenii
ENSORLG00000007156	gatc	83	64.835	ENSOPRG00000004226	-	74	61.000	Ochotona_princeps
ENSORLG00000007156	gatc	74	66.667	ENSODEG00000005919	-	74	55.882	Octodon_degus
ENSORLG00000007156	gatc	100	79.675	ENSONIG00000013444	gatc	85	79.675	Oreochromis_niloticus
ENSORLG00000007156	gatc	85	66.667	ENSOCUG00000009867	-	75	60.784	Oryctolagus_cuniculus
ENSORLG00000007156	gatc	100	99.174	ENSORLG00020014991	gatc	64	99.174	Oryzias_latipes_hni
ENSORLG00000007156	gatc	100	98.347	ENSORLG00015003450	gatc	64	98.347	Oryzias_latipes_hsok
ENSORLG00000007156	gatc	100	92.562	ENSOMEG00000002280	gatc	65	92.562	Oryzias_melastigma
ENSORLG00000007156	gatc	86	63.158	ENSOGAG00000003850	-	97	57.547	Otolemur_garnettii
ENSORLG00000007156	gatc	88	58.763	ENSOARG00000012338	-	83	54.206	Ovis_aries
ENSORLG00000007156	gatc	83	64.835	ENSPPAG00000029164	GATC	95	50.376	Pan_paniscus
ENSORLG00000007156	gatc	83	63.736	ENSPPRG00000000929	-	96	48.462	Panthera_pardus
ENSORLG00000007156	gatc	83	63.736	ENSPTIG00000009889	-	96	48.462	Panthera_tigris_altaica
ENSORLG00000007156	gatc	83	64.835	ENSPTRG00000049887	GATC	75	59.406	Pan_troglodytes
ENSORLG00000007156	gatc	83	63.736	ENSPANG00000033975	GATC	95	49.624	Papio_anubis
ENSORLG00000007156	gatc	100	68.595	ENSPKIG00000024856	gatc	62	68.595	Paramormyrops_kingsleyae
ENSORLG00000007156	gatc	90	68.687	ENSPSIG00000011112	-	99	62.931	Pelodiscus_sinensis
ENSORLG00000007156	gatc	100	78.512	ENSPMGG00000018829	gatc	77	78.512	Periophthalmus_magnuspinnatus
ENSORLG00000007156	gatc	78	67.442	ENSPEMG00000000665	Gatc	61	62.766	Peromyscus_maniculatus_bairdii
ENSORLG00000007156	gatc	74	65.432	ENSPCIG00000025999	-	62	58.947	Phascolarctos_cinereus
ENSORLG00000007156	gatc	100	80.992	ENSPFOG00000011603	gatc	65	80.992	Poecilia_formosa
ENSORLG00000007156	gatc	100	80.165	ENSPLAG00000002471	gatc	65	80.165	Poecilia_latipinna
ENSORLG00000007156	gatc	100	80.165	ENSPMEG00000020958	gatc	65	80.165	Poecilia_mexicana
ENSORLG00000007156	gatc	98	79.661	ENSPREG00000022256	gatc	80	79.661	Poecilia_reticulata
ENSORLG00000007156	gatc	89	63.265	ENSPPYG00000005030	GATC	99	50.000	Pongo_abelii
ENSORLG00000007156	gatc	83	63.736	ENSPCAG00000013864	-	84	53.333	Procavia_capensis
ENSORLG00000007156	gatc	74	66.667	ENSPCOG00000009493	-	92	50.407	Propithecus_coquereli
ENSORLG00000007156	gatc	73	63.750	ENSPCOG00000015558	-	90	48.333	Propithecus_coquereli
ENSORLG00000007156	gatc	79	68.966	ENSPVAG00000002228	-	93	52.000	Pteropus_vampyrus
ENSORLG00000007156	gatc	100	80.992	ENSPNYG00000016015	gatc	63	80.992	Pundamilia_nyererei
ENSORLG00000007156	gatc	100	72.727	ENSPNAG00000001239	gatc	54	72.727	Pygocentrus_nattereri
ENSORLG00000007156	gatc	78	67.442	ENSRNOG00000001161	Gatc	61	62.766	Rattus_norvegicus
ENSORLG00000007156	gatc	76	64.286	ENSRNOG00000045621	Gatc	61	59.140	Rattus_norvegicus
ENSORLG00000007156	gatc	83	64.835	ENSRBIG00000033363	GATC	73	60.606	Rhinopithecus_bieti
ENSORLG00000007156	gatc	83	64.835	ENSRROG00000042802	GATC	73	60.606	Rhinopithecus_roxellana
ENSORLG00000007156	gatc	83	63.736	ENSSBOG00000033750	-	95	50.376	Saimiri_boliviensis_boliviensis
ENSORLG00000007156	gatc	88	62.887	ENSSHAG00000005745	-	100	58.491	Sarcophilus_harrisii
ENSORLG00000007156	gatc	92	71.171	ENSSFOG00015002508	gatc	65	71.569	Scleropages_formosus
ENSORLG00000007156	gatc	100	83.471	ENSSMAG00000014280	gatc	67	83.471	Scophthalmus_maximus
ENSORLG00000007156	gatc	100	81.818	ENSSDUG00000012206	gatc	62	81.818	Seriola_dumerili
ENSORLG00000007156	gatc	100	81.818	ENSSLDG00000025159	gatc	61	81.818	Seriola_lalandi_dorsalis
ENSORLG00000007156	gatc	92	59.459	ENSSPUG00000015693	-	95	53.435	Sphenodon_punctatus
ENSORLG00000007156	gatc	100	85.950	ENSSPAG00000011860	gatc	63	85.950	Stegastes_partitus
ENSORLG00000007156	gatc	98	55.462	ENSSSCG00000032747	-	98	50.725	Sus_scrofa
ENSORLG00000007156	gatc	89	67.347	ENSTGUG00000009561	-	99	62.617	Taeniopygia_guttata
ENSORLG00000007156	gatc	100	76.033	ENSTRUG00000021596	gatc	61	76.033	Takifugu_rubripes
ENSORLG00000007156	gatc	100	80.165	ENSTNIG00000015879	gatc	58	80.165	Tetraodon_nigroviridis
ENSORLG00000007156	gatc	83	64.835	ENSTTRG00000000144	GATC	95	50.376	Tursiops_truncatus
ENSORLG00000007156	gatc	83	64.835	ENSUAMG00000015523	-	88	51.667	Ursus_americanus
ENSORLG00000007156	gatc	83	64.835	ENSVVUG00000021055	-	86	52.991	Vulpes_vulpes
ENSORLG00000007156	gatc	90	82.828	ENSXCOG00000017087	gatc	85	77.778	Xiphophorus_couchianus
ENSORLG00000007156	gatc	100	77.686	ENSXMAG00000018267	gatc	65	77.686	Xiphophorus_maculatus