EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000007365 (Gene tree)
Gene ID: 101170959
Gene Symbol: acin1b
Alias: -
Full Name: apoptotic chromatin condensation inducer in the nucleus
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 27959 bases
Position: chr18:18028412-18056370
Accession: 101170959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000009234	SAP	PF02037.27	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000009235	-	3532	XM_004079912	ENSORLP00000009234	1146 (aa)	XP_004079960	H2LT17

Gene Model

Click here to download ENSORLG00000007365's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG
ola03015	mRNA surveillance pathway	KEGG
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007365's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007365	acin1b	96	68.510	ENSAOCG00000018649	acin1b	85	75.617	Amphiprion_ocellaris
ENSORLG00000007365	acin1b	100	65.956	ENSATEG00000001677	acin1b	97	65.909	Anabas_testudineus
ENSORLG00000007365	acin1b	79	63.992	ENSAMXG00000036892	acin1b	71	62.857	Astyanax_mexicanus
ENSORLG00000007365	acin1b	50	78.261	ENSCPOG00000027234	ACIN1	50	56.322	Cavia_porcellus
ENSORLG00000007365	acin1b	50	78.261	ENSCLAG00000010588	ACIN1	51	57.088	Chinchilla_lanigera
ENSORLG00000007365	acin1b	50	78.261	ENSCGRG00001010945	Acin1	50	56.381	Cricetulus_griseus_chok1gshd
ENSORLG00000007365	acin1b	92	58.252	ENSCSEG00000004364	acin1b	92	58.884	Cynoglossus_semilaevis
ENSORLG00000007365	acin1b	51	74.576	ENSCVAG00000009841	acin1b	97	64.544	Cyprinodon_variegatus
ENSORLG00000007365	acin1b	51	74.219	ENSDARG00000054290	acin1a	69	74.219	Danio_rerio
ENSORLG00000007365	acin1b	77	63.105	ENSELUG00000003511	acin1b	77	60.396	Esox_lucius
ENSORLG00000007365	acin1b	50	78.261	ENSFDAG00000011979	ACIN1	50	56.439	Fukomys_damarensis
ENSORLG00000007365	acin1b	53	71.613	ENSGAFG00000003479	acin1b	97	64.334	Gambusia_affinis
ENSORLG00000007365	acin1b	51	72.222	ENSGAFG00000015171	-	72	80.952	Gambusia_affinis
ENSORLG00000007365	acin1b	99	59.520	ENSHCOG00000000814	acin1b	92	61.323	Hippocampus_comes
ENSORLG00000007365	acin1b	53	87.778	ENSIPUG00000006269	acin1b	72	80.952	Ictalurus_punctatus
ENSORLG00000007365	acin1b	52	78.261	ENSSTOG00000007169	ACIN1	52	60.000	Ictidomys_tridecemlineatus
ENSORLG00000007365	acin1b	52	68.702	ENSLACG00000015560	-	50	68.750	Latimeria_chalumnae
ENSORLG00000007365	acin1b	59	71.076	ENSMAMG00000015673	acin1b	97	66.639	Mastacembelus_armatus
ENSORLG00000007365	acin1b	51	77.143	ENSMMOG00000013326	acin1a	56	77.143	Mola_mola
ENSORLG00000007365	acin1b	100	99.040	ENSORLG00020007510	acin1b	100	99.040	Oryzias_latipes_hni
ENSORLG00000007365	acin1b	97	88.329	ENSOMEG00000015053	acin1b	97	88.142	Oryzias_melastigma
ENSORLG00000007365	acin1b	63	86.667	ENSPKIG00000006917	-	68	59.696	Paramormyrops_kingsleyae
ENSORLG00000007365	acin1b	75	64.531	ENSPMGG00000018777	acin1b	90	64.925	Periophthalmus_magnuspinnatus
ENSORLG00000007365	acin1b	52	71.845	ENSPMEG00000000313	acin1b	93	65.139	Poecilia_mexicana
ENSORLG00000007365	acin1b	52	71.036	ENSPREG00000004790	acin1b	93	64.484	Poecilia_reticulata
ENSORLG00000007365	acin1b	77	61.382	ENSPNAG00000022123	acin1b	70	63.692	Pygocentrus_nattereri
ENSORLG00000007365	acin1b	82	55.616	ENSSFOG00015011452	-	55	55.397	Scleropages_formosus
ENSORLG00000007365	acin1b	82	60.105	ENSSFOG00015006344	acin1b	65	62.111	Scleropages_formosus
ENSORLG00000007365	acin1b	52	73.650	ENSSMAG00000005897	acin1b	96	65.280	Scophthalmus_maximus
ENSORLG00000007365	acin1b	98	63.734	ENSSDUG00000006437	acin1b	97	64.051	Seriola_dumerili
ENSORLG00000007365	acin1b	50	78.261	ENSSSCG00000002034	ACIN1	50	68.067	Sus_scrofa
ENSORLG00000007365	acin1b	78	69.811	ENSTRUG00000008622	acin1b	72	74.834	Takifugu_rubripes
ENSORLG00000007365	acin1b	65	61.499	ENSTNIG00000013841	acin1b	71	63.636	Tetraodon_nigroviridis