EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000007385 (Gene tree)
Gene ID: 101162145
Gene Symbol: ddx54
Alias: -
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8077 bases
Position: chr12:12760550-12768626
Accession: 101162145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000009258	DBP10CT	PF08147.12	2.5e-13	1	1
ENSORLP00000009258	DEAD	PF00270.29	1.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000009259	-	3617	XM_004074767	ENSORLP00000009258	852 (aa)	XP_004074815	H2LT40

Gene Model

Click here to download ENSORLG00000007385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000007385	ddx54	52	33.478	ENSORLG00000008090	ddx18	67	33.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007385	ddx54	97	60.585	ENSG00000123064	DDX54	100	87.981	Homo_sapiens
ENSORLG00000007385	ddx54	98	82.270	ENSAPOG00000008602	ddx54	100	82.135	Acanthochromis_polyacanthus
ENSORLG00000007385	ddx54	98	60.596	ENSAMEG00000008775	DDX54	96	60.184	Ailuropoda_melanoleuca
ENSORLG00000007385	ddx54	100	80.533	ENSACIG00000019104	ddx54	100	80.070	Amphilophus_citrinellus
ENSORLG00000007385	ddx54	98	81.893	ENSAOCG00000008449	ddx54	100	81.998	Amphiprion_ocellaris
ENSORLG00000007385	ddx54	98	81.893	ENSAPEG00000014287	ddx54	100	81.998	Amphiprion_percula
ENSORLG00000007385	ddx54	100	81.808	ENSATEG00000018529	ddx54	100	81.924	Anabas_testudineus
ENSORLG00000007385	ddx54	95	63.537	ENSAPLG00000013191	DDX54	100	63.235	Anas_platyrhynchos
ENSORLG00000007385	ddx54	97	63.582	ENSACAG00000004703	DDX54	98	63.101	Anolis_carolinensis
ENSORLG00000007385	ddx54	100	51.814	ENSANAG00000032761	-	98	51.595	Aotus_nancymaae
ENSORLG00000007385	ddx54	90	54.151	ENSANAG00000032241	-	95	53.636	Aotus_nancymaae
ENSORLG00000007385	ddx54	100	81.360	ENSACLG00000013176	ddx54	100	81.360	Astatotilapia_calliptera
ENSORLG00000007385	ddx54	98	74.556	ENSAMXG00000009189	ddx54	100	73.727	Astyanax_mexicanus
ENSORLG00000007385	ddx54	100	60.436	ENSBTAG00000011930	DDX54	93	60.665	Bos_taurus
ENSORLG00000007385	ddx54	82	47.772	WBGene00022378	Y94H6A.5	86	47.983	Caenorhabditis_elegans
ENSORLG00000007385	ddx54	87	63.648	ENSCJAG00000010039	DDX54	83	63.035	Callithrix_jacchus
ENSORLG00000007385	ddx54	66	51.049	ENSCAFG00000009029	DDX54	99	50.940	Canis_familiaris
ENSORLG00000007385	ddx54	98	61.196	ENSCAFG00020017643	DDX54	98	60.159	Canis_lupus_dingo
ENSORLG00000007385	ddx54	98	60.070	ENSCHIG00000026798	DDX54	98	59.450	Capra_hircus
ENSORLG00000007385	ddx54	95	57.470	ENSTSYG00000007898	DDX54	94	57.437	Carlito_syrichta
ENSORLG00000007385	ddx54	95	60.880	ENSCAPG00000001482	DDX54	99	58.252	Cavia_aperea
ENSORLG00000007385	ddx54	98	60.258	ENSCPOG00000020649	DDX54	96	60.117	Cavia_porcellus
ENSORLG00000007385	ddx54	97	61.157	ENSCCAG00000022625	DDX54	98	60.345	Cebus_capucinus
ENSORLG00000007385	ddx54	97	61.033	ENSCATG00000041943	DDX54	98	60.229	Cercocebus_atys
ENSORLG00000007385	ddx54	97	59.272	ENSCLAG00000010748	DDX54	95	59.786	Chinchilla_lanigera
ENSORLG00000007385	ddx54	94	60.770	ENSCSAG00000002432	DDX54	90	60.870	Chlorocebus_sabaeus
ENSORLG00000007385	ddx54	77	61.153	ENSCPBG00000017982	DDX54	85	61.035	Chrysemys_picta_bellii
ENSORLG00000007385	ddx54	92	53.980	ENSCING00000004789	-	98	53.210	Ciona_intestinalis
ENSORLG00000007385	ddx54	90	52.911	ENSCSAVG00000008916	-	98	70.482	Ciona_savignyi
ENSORLG00000007385	ddx54	90	86.809	ENSCANG00000020637	DDX54	99	86.809	Colobus_angolensis_palliatus
ENSORLG00000007385	ddx54	100	60.345	ENSCGRG00001014803	Ddx54	96	60.870	Cricetulus_griseus_chok1gshd
ENSORLG00000007385	ddx54	100	60.206	ENSCGRG00000002827	Ddx54	96	60.727	Cricetulus_griseus_crigri
ENSORLG00000007385	ddx54	98	76.123	ENSCSEG00000016462	ddx54	100	76.334	Cynoglossus_semilaevis
ENSORLG00000007385	ddx54	100	80.649	ENSCVAG00000022404	ddx54	100	79.675	Cyprinodon_variegatus
ENSORLG00000007385	ddx54	98	72.137	ENSDARG00000105286	ddx54	98	72.137	Danio_rerio
ENSORLG00000007385	ddx54	98	60.280	ENSDNOG00000032913	DDX54	96	60.164	Dasypus_novemcinctus
ENSORLG00000007385	ddx54	81	55.477	ENSDORG00000003399	Ddx54	95	55.241	Dipodomys_ordii
ENSORLG00000007385	ddx54	87	46.015	FBgn0052344	CG32344	87	46.791	Drosophila_melanogaster
ENSORLG00000007385	ddx54	50	86.897	ENSETEG00000008430	-	52	86.897	Echinops_telfairi
ENSORLG00000007385	ddx54	82	59.291	ENSEBUG00000008886	ddx54	98	59.740	Eptatretus_burgeri
ENSORLG00000007385	ddx54	88	57.642	ENSEASG00005009501	DDX54	100	54.321	Equus_asinus_asinus
ENSORLG00000007385	ddx54	90	70.255	ENSECAG00000012890	DDX54	98	67.517	Equus_caballus
ENSORLG00000007385	ddx54	59	84.810	ENSEEUG00000008296	-	58	84.810	Erinaceus_europaeus
ENSORLG00000007385	ddx54	100	73.099	ENSELUG00000013533	ddx54	100	72.985	Esox_lucius
ENSORLG00000007385	ddx54	98	60.211	ENSFCAG00000027806	DDX54	98	59.770	Felis_catus
ENSORLG00000007385	ddx54	92	65.152	ENSFALG00000007737	DDX54	100	64.646	Ficedula_albicollis
ENSORLG00000007385	ddx54	87	76.235	ENSFDAG00000019953	DDX54	97	74.058	Fukomys_damarensis
ENSORLG00000007385	ddx54	100	81.395	ENSFHEG00000018425	ddx54	100	80.581	Fundulus_heteroclitus
ENSORLG00000007385	ddx54	96	72.497	ENSGMOG00000011746	ddx54	100	72.684	Gadus_morhua
ENSORLG00000007385	ddx54	95	64.583	ENSGALG00000007490	DDX54	97	63.971	Gallus_gallus
ENSORLG00000007385	ddx54	100	77.907	ENSGAFG00000010336	ddx54	100	77.855	Gambusia_affinis
ENSORLG00000007385	ddx54	98	75.289	ENSGACG00000016793	ddx54	100	75.682	Gasterosteus_aculeatus
ENSORLG00000007385	ddx54	95	65.074	ENSGAGG00000022803	DDX54	100	65.414	Gopherus_agassizii
ENSORLG00000007385	ddx54	97	60.397	ENSGGOG00000010414	DDX54	98	59.863	Gorilla_gorilla
ENSORLG00000007385	ddx54	97	60.190	ENSHGLG00000014411	DDX54	95	60.190	Heterocephalus_glaber_female
ENSORLG00000007385	ddx54	97	60.261	ENSHGLG00100018511	DDX54	95	60.261	Heterocephalus_glaber_male
ENSORLG00000007385	ddx54	100	77.726	ENSHCOG00000019287	ddx54	100	77.958	Hippocampus_comes
ENSORLG00000007385	ddx54	98	72.845	ENSIPUG00000015556	Ddx54	98	73.318	Ictalurus_punctatus
ENSORLG00000007385	ddx54	89	59.640	ENSSTOG00000004068	DDX54	100	59.692	Ictidomys_tridecemlineatus
ENSORLG00000007385	ddx54	98	60.563	ENSJJAG00000015712	Ddx54	97	60.677	Jaculus_jaculus
ENSORLG00000007385	ddx54	100	80.326	ENSKMAG00000017520	ddx54	100	80.397	Kryptolebias_marmoratus
ENSORLG00000007385	ddx54	100	77.675	ENSLBEG00000019480	ddx54	100	77.560	Labrus_bergylta
ENSORLG00000007385	ddx54	96	68.214	ENSLACG00000008944	DDX54	98	67.620	Latimeria_chalumnae
ENSORLG00000007385	ddx54	98	70.720	ENSLOCG00000008485	ddx54	100	70.396	Lepisosteus_oculatus
ENSORLG00000007385	ddx54	90	51.907	ENSLAFG00000027782	DDX54	100	51.422	Loxodonta_africana
ENSORLG00000007385	ddx54	97	60.635	ENSMFAG00000043636	DDX54	98	60.091	Macaca_fascicularis
ENSORLG00000007385	ddx54	97	60.211	ENSMMUG00000021795	DDX54	98	60.137	Macaca_mulatta
ENSORLG00000007385	ddx54	97	54.460	ENSMNEG00000043605	DDX54	98	54.566	Macaca_nemestrina
ENSORLG00000007385	ddx54	97	57.512	ENSMLEG00000038981	DDX54	98	57.371	Mandrillus_leucophaeus
ENSORLG00000007385	ddx54	100	80.831	ENSMAMG00000012784	ddx54	100	80.023	Mastacembelus_armatus
ENSORLG00000007385	ddx54	100	79.601	ENSMZEG00005018773	ddx54	100	79.601	Maylandia_zebra
ENSORLG00000007385	ddx54	94	63.196	ENSMGAG00000009183	DDX54	99	62.697	Meleagris_gallopavo
ENSORLG00000007385	ddx54	98	61.007	ENSMAUG00000011051	Ddx54	96	61.637	Mesocricetus_auratus
ENSORLG00000007385	ddx54	100	59.677	ENSMICG00000012217	DDX54	98	60.115	Microcebus_murinus
ENSORLG00000007385	ddx54	100	60.115	ENSMOCG00000010835	Ddx54	96	60.936	Microtus_ochrogaster
ENSORLG00000007385	ddx54	98	78.043	ENSMMOG00000009634	ddx54	100	77.400	Mola_mola
ENSORLG00000007385	ddx54	95	61.800	ENSMODG00000003413	DDX54	97	61.314	Monodelphis_domestica
ENSORLG00000007385	ddx54	100	81.024	ENSMALG00000022098	ddx54	100	81.024	Monopterus_albus
ENSORLG00000007385	ddx54	97	61.393	MGP_CAROLIEiJ_G0027665	Ddx54	95	61.502	Mus_caroli
ENSORLG00000007385	ddx54	97	61.085	ENSMUSG00000029599	Ddx54	95	61.557	Mus_musculus
ENSORLG00000007385	ddx54	98	61.124	MGP_PahariEiJ_G0024247	Ddx54	96	61.279	Mus_pahari
ENSORLG00000007385	ddx54	97	61.222	MGP_SPRETEiJ_G0028665	Ddx54	97	61.220	Mus_spretus
ENSORLG00000007385	ddx54	98	60.303	ENSMPUG00000002574	DDX54	98	59.521	Mustela_putorius_furo
ENSORLG00000007385	ddx54	97	60.449	ENSNGAG00000021313	Ddx54	95	60.261	Nannospalax_galili
ENSORLG00000007385	ddx54	77	91.872	ENSNBRG00000005588	ddx54	75	91.872	Neolamprologus_brichardi
ENSORLG00000007385	ddx54	97	59.627	ENSNLEG00000000162	DDX54	95	60.638	Nomascus_leucogenys
ENSORLG00000007385	ddx54	81	63.845	ENSMEUG00000015392	DDX54	97	64.307	Notamacropus_eugenii
ENSORLG00000007385	ddx54	88	53.386	ENSOPRG00000012000	DDX54	86	53.448	Ochotona_princeps
ENSORLG00000007385	ddx54	97	58.621	ENSODEG00000014863	DDX54	95	58.502	Octodon_degus
ENSORLG00000007385	ddx54	98	58.693	ENSOCUG00000008932	DDX54	98	57.829	Oryctolagus_cuniculus
ENSORLG00000007385	ddx54	100	99.413	ENSORLG00020000858	ddx54	100	99.413	Oryzias_latipes_hni
ENSORLG00000007385	ddx54	100	99.178	ENSORLG00015006956	ddx54	100	99.178	Oryzias_latipes_hsok
ENSORLG00000007385	ddx54	98	91.408	ENSOMEG00000003663	ddx54	100	92.065	Oryzias_melastigma
ENSORLG00000007385	ddx54	98	61.215	ENSOGAG00000004210	DDX54	96	61.422	Otolemur_garnettii
ENSORLG00000007385	ddx54	98	60.419	ENSOARG00000008363	DDX54	98	59.565	Ovis_aries
ENSORLG00000007385	ddx54	97	59.375	ENSPPAG00000042178	DDX54	98	59.977	Pan_paniscus
ENSORLG00000007385	ddx54	98	58.012	ENSPPRG00000005223	DDX54	98	58.190	Panthera_pardus
ENSORLG00000007385	ddx54	62	84.375	ENSPTIG00000019728	DDX54	82	83.938	Panthera_tigris_altaica
ENSORLG00000007385	ddx54	97	59.582	ENSPTRG00000005483	DDX54	98	59.725	Pan_troglodytes
ENSORLG00000007385	ddx54	97	60.329	ENSPANG00000008883	DDX54	98	60.137	Papio_anubis
ENSORLG00000007385	ddx54	98	73.373	ENSPKIG00000018272	ddx54	98	73.605	Paramormyrops_kingsleyae
ENSORLG00000007385	ddx54	54	77.706	ENSPSIG00000005055	DDX54	95	77.706	Pelodiscus_sinensis
ENSORLG00000007385	ddx54	95	73.030	ENSPMGG00000010988	ddx54	99	73.276	Periophthalmus_magnuspinnatus
ENSORLG00000007385	ddx54	100	59.840	ENSPEMG00000016701	Ddx54	96	60.631	Peromyscus_maniculatus_bairdii
ENSORLG00000007385	ddx54	100	80.974	ENSPFOG00000019822	ddx54	100	80.278	Poecilia_formosa
ENSORLG00000007385	ddx54	100	80.858	ENSPLAG00000004530	ddx54	100	80.162	Poecilia_latipinna
ENSORLG00000007385	ddx54	100	80.742	ENSPMEG00000010803	ddx54	100	80.046	Poecilia_mexicana
ENSORLG00000007385	ddx54	100	80.836	ENSPREG00000014372	ddx54	100	80.326	Poecilia_reticulata
ENSORLG00000007385	ddx54	97	60.681	ENSPPYG00000004984	DDX54	98	59.886	Pongo_abelii
ENSORLG00000007385	ddx54	98	55.811	ENSPCAG00000008462	DDX54	96	56.163	Procavia_capensis
ENSORLG00000007385	ddx54	98	60.981	ENSPCOG00000006050	DDX54	98	60.959	Propithecus_coquereli
ENSORLG00000007385	ddx54	90	81.853	ENSPVAG00000017347	DDX54	91	78.777	Pteropus_vampyrus
ENSORLG00000007385	ddx54	100	71.678	ENSPNAG00000014459	ddx54	96	78.553	Pygocentrus_nattereri
ENSORLG00000007385	ddx54	98	61.422	ENSRNOG00000001377	Ddx54	92	61.072	Rattus_norvegicus
ENSORLG00000007385	ddx54	100	60.296	ENSRBIG00000032535	DDX54	98	60.251	Rhinopithecus_bieti
ENSORLG00000007385	ddx54	100	56.314	ENSRROG00000029557	DDX54	98	56.883	Rhinopithecus_roxellana
ENSORLG00000007385	ddx54	91	35.236	YDL031W	-	79	36.933	Saccharomyces_cerevisiae
ENSORLG00000007385	ddx54	97	61.657	ENSSBOG00000028194	DDX54	98	60.690	Saimiri_boliviensis_boliviensis
ENSORLG00000007385	ddx54	95	58.873	ENSSHAG00000015646	DDX54	99	58.724	Sarcophilus_harrisii
ENSORLG00000007385	ddx54	97	75.779	ENSSFOG00015014981	ddx54	100	74.299	Scleropages_formosus
ENSORLG00000007385	ddx54	98	77.468	ENSSMAG00000003210	ddx54	100	78.326	Scophthalmus_maximus
ENSORLG00000007385	ddx54	96	79.196	ENSSDUG00000004474	ddx54	100	79.224	Seriola_dumerili
ENSORLG00000007385	ddx54	98	79.162	ENSSLDG00000010380	ddx54	100	79.314	Seriola_lalandi_dorsalis
ENSORLG00000007385	ddx54	97	65.066	ENSSPUG00000014141	DDX54	96	64.501	Sphenodon_punctatus
ENSORLG00000007385	ddx54	93	77.193	ENSSPAG00000022918	ddx54	97	76.622	Stegastes_partitus
ENSORLG00000007385	ddx54	98	61.098	ENSSSCG00000009876	DDX54	98	60.069	Sus_scrofa
ENSORLG00000007385	ddx54	94	62.913	ENSTGUG00000009126	DDX54	100	63.119	Taeniopygia_guttata
ENSORLG00000007385	ddx54	100	77.829	ENSTRUG00000014939	ddx54	100	77.714	Takifugu_rubripes
ENSORLG00000007385	ddx54	100	75.491	ENSTNIG00000009037	ddx54	100	75.437	Tetraodon_nigroviridis
ENSORLG00000007385	ddx54	73	79.012	ENSTBEG00000003783	DDX54	76	79.012	Tupaia_belangeri
ENSORLG00000007385	ddx54	98	58.324	ENSTTRG00000016678	DDX54	98	57.600	Tursiops_truncatus
ENSORLG00000007385	ddx54	100	58.810	ENSUAMG00000028387	DDX54	100	59.676	Ursus_americanus
ENSORLG00000007385	ddx54	81	79.500	ENSUMAG00000010245	DDX54	94	79.894	Ursus_maritimus
ENSORLG00000007385	ddx54	98	61.340	ENSVVUG00000010212	DDX54	98	60.159	Vulpes_vulpes
ENSORLG00000007385	ddx54	99	63.931	ENSXETG00000016410	ddx54	100	63.931	Xenopus_tropicalis
ENSORLG00000007385	ddx54	100	81.008	ENSXCOG00000002909	ddx54	100	80.891	Xiphophorus_couchianus
ENSORLG00000007385	ddx54	100	81.185	ENSXMAG00000005312	ddx54	100	81.141	Xiphophorus_maculatus