EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000007392 (Gene tree)
Gene ID: 101169745
Gene Symbol: shrprbck1r
Alias: -
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 11195 bases
Position: chr20:14926173-14937367
Accession: 101169745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000009263	zf-RanBP	PF00641.18	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000009264	-	3391	XM_011488852	ENSORLP00000009263	709 (aa)	XP_011487154	H2LT45

Gene Model

Click here to download ENSORLG00000007392's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04217	Necroptosis	KEGG
ola04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000007392	shrprbck1r	60	55.682	ENSORLG00000017281	sharpin	95	55.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007392	shrprbck1r	60	57.306	ENSAPOG00000023352	sharpin	95	57.306	Acanthochromis_polyacanthus
ENSORLG00000007392	shrprbck1r	100	80.474	ENSAPOG00000022737	shrprbck1r	100	80.474	Acanthochromis_polyacanthus
ENSORLG00000007392	shrprbck1r	100	79.887	ENSACIG00000002184	shrprbck1r	100	79.887	Amphilophus_citrinellus
ENSORLG00000007392	shrprbck1r	60	57.534	ENSAOCG00000017464	sharpin	95	57.534	Amphiprion_ocellaris
ENSORLG00000007392	shrprbck1r	100	83.006	ENSAOCG00000002890	shrprbck1r	100	83.006	Amphiprion_ocellaris
ENSORLG00000007392	shrprbck1r	100	80.645	ENSAPEG00000023274	shrprbck1r	100	80.645	Amphiprion_percula
ENSORLG00000007392	shrprbck1r	60	57.534	ENSAPEG00000004049	sharpin	95	57.534	Amphiprion_percula
ENSORLG00000007392	shrprbck1r	100	77.746	ENSATEG00000014561	shrprbck1r	100	78.310	Anabas_testudineus
ENSORLG00000007392	shrprbck1r	60	58.102	ENSATEG00000007832	sharpin	88	58.102	Anabas_testudineus
ENSORLG00000007392	shrprbck1r	100	78.622	ENSACLG00000022609	shrprbck1r	100	79.184	Astatotilapia_calliptera
ENSORLG00000007392	shrprbck1r	55	53.728	ENSAMXG00000006229	sharpin	97	53.728	Astyanax_mexicanus
ENSORLG00000007392	shrprbck1r	100	67.804	ENSAMXG00000021016	shrprbck1r	100	68.450	Astyanax_mexicanus
ENSORLG00000007392	shrprbck1r	100	74.438	ENSCSEG00000011306	shrprbck1r	100	74.579	Cynoglossus_semilaevis
ENSORLG00000007392	shrprbck1r	100	79.126	ENSCVAG00000007250	shrprbck1r	100	79.126	Cyprinodon_variegatus
ENSORLG00000007392	shrprbck1r	59	55.275	ENSCVAG00000006586	sharpin	95	55.275	Cyprinodon_variegatus
ENSORLG00000007392	shrprbck1r	100	69.819	ENSDARG00000059871	shrprbck1r	100	69.819	Danio_rerio
ENSORLG00000007392	shrprbck1r	55	53.470	ENSDARG00000076995	sharpin	94	53.470	Danio_rerio
ENSORLG00000007392	shrprbck1r	100	71.189	ENSELUG00000016022	shrprbck1r	100	71.189	Esox_lucius
ENSORLG00000007392	shrprbck1r	59	55.734	ENSFHEG00000013564	sharpin	94	55.734	Fundulus_heteroclitus
ENSORLG00000007392	shrprbck1r	51	61.027	ENSGMOG00000010123	sharpin	91	61.027	Gadus_morhua
ENSORLG00000007392	shrprbck1r	59	43.318	ENSGAFG00000021405	sharpin	95	43.318	Gambusia_affinis
ENSORLG00000007392	shrprbck1r	100	78.420	ENSGAFG00000009309	shrprbck1r	100	78.420	Gambusia_affinis
ENSORLG00000007392	shrprbck1r	75	77.401	ENSGACG00000002544	shrprbck1r	99	77.401	Gasterosteus_aculeatus
ENSORLG00000007392	shrprbck1r	100	79.044	ENSHBUG00000021933	shrprbck1r	100	79.243	Haplochromis_burtoni
ENSORLG00000007392	shrprbck1r	60	51.059	ENSHCOG00000018847	sharpin	80	51.168	Hippocampus_comes
ENSORLG00000007392	shrprbck1r	54	53.944	ENSIPUG00000011951	sharpin	95	88.462	Ictalurus_punctatus
ENSORLG00000007392	shrprbck1r	96	67.971	ENSIPUG00000014247	shrprbck1r	95	67.826	Ictalurus_punctatus
ENSORLG00000007392	shrprbck1r	100	78.720	ENSKMAG00000015215	shrprbck1r	100	78.720	Kryptolebias_marmoratus
ENSORLG00000007392	shrprbck1r	60	56.944	ENSKMAG00000015204	sharpin	76	56.944	Kryptolebias_marmoratus
ENSORLG00000007392	shrprbck1r	100	78.732	ENSLBEG00000016876	shrprbck1r	100	79.437	Labrus_bergylta
ENSORLG00000007392	shrprbck1r	60	56.916	ENSLBEG00000016624	sharpin	96	56.916	Labrus_bergylta
ENSORLG00000007392	shrprbck1r	95	52.847	ENSLACG00000010948	-	97	52.847	Latimeria_chalumnae
ENSORLG00000007392	shrprbck1r	100	67.038	ENSLOCG00000008910	shrprbck1r	100	67.038	Lepisosteus_oculatus
ENSORLG00000007392	shrprbck1r	50	70.968	ENSMAMG00000014645	sharpin	95	70.968	Mastacembelus_armatus
ENSORLG00000007392	shrprbck1r	100	77.606	ENSMAMG00000022930	shrprbck1r	100	78.169	Mastacembelus_armatus
ENSORLG00000007392	shrprbck1r	100	78.481	ENSMZEG00005021257	shrprbck1r	100	79.044	Maylandia_zebra
ENSORLG00000007392	shrprbck1r	100	76.039	ENSMMOG00000003764	shrprbck1r	100	76.323	Mola_mola
ENSORLG00000007392	shrprbck1r	50	70.968	ENSMALG00000020528	sharpin	96	70.968	Monopterus_albus
ENSORLG00000007392	shrprbck1r	96	78.792	ENSMALG00000008861	shrprbck1r	95	78.792	Monopterus_albus
ENSORLG00000007392	shrprbck1r	100	78.903	ENSNBRG00000002270	shrprbck1r	100	79.466	Neolamprologus_brichardi
ENSORLG00000007392	shrprbck1r	55	54.015	ENSONIG00000009626	-	97	54.015	Oreochromis_niloticus
ENSORLG00000007392	shrprbck1r	100	78.481	ENSONIG00000014401	shrprbck1r	100	79.044	Oreochromis_niloticus
ENSORLG00000007392	shrprbck1r	100	98.590	ENSORLG00020018619	shrprbck1r	100	98.590	Oryzias_latipes_hni
ENSORLG00000007392	shrprbck1r	60	55.581	ENSORLG00020000801	sharpin	95	55.581	Oryzias_latipes_hni
ENSORLG00000007392	shrprbck1r	100	97.884	ENSORLG00015018865	shrprbck1r	100	97.884	Oryzias_latipes_hsok
ENSORLG00000007392	shrprbck1r	60	55.809	ENSORLG00015009860	sharpin	95	55.809	Oryzias_latipes_hsok
ENSORLG00000007392	shrprbck1r	55	60.526	ENSOMEG00000005729	sharpin	89	60.526	Oryzias_melastigma
ENSORLG00000007392	shrprbck1r	100	93.935	ENSOMEG00000012749	shrprbck1r	100	93.935	Oryzias_melastigma
ENSORLG00000007392	shrprbck1r	100	69.134	ENSPKIG00000006933	shrprbck1r	100	69.274	Paramormyrops_kingsleyae
ENSORLG00000007392	shrprbck1r	65	58.562	ENSPKIG00000018308	-	96	58.562	Paramormyrops_kingsleyae
ENSORLG00000007392	shrprbck1r	100	74.789	ENSPMGG00000013254	shrprbck1r	100	74.789	Periophthalmus_magnuspinnatus
ENSORLG00000007392	shrprbck1r	59	54.795	ENSPFOG00000015253	sharpin	95	54.795	Poecilia_formosa
ENSORLG00000007392	shrprbck1r	100	79.126	ENSPFOG00000004214	shrprbck1r	100	79.126	Poecilia_formosa
ENSORLG00000007392	shrprbck1r	100	79.126	ENSPLAG00000020523	shrprbck1r	100	79.126	Poecilia_latipinna
ENSORLG00000007392	shrprbck1r	59	55.023	ENSPLAG00000000423	sharpin	95	55.023	Poecilia_latipinna
ENSORLG00000007392	shrprbck1r	100	77.433	ENSPMEG00000006877	shrprbck1r	100	77.433	Poecilia_mexicana
ENSORLG00000007392	shrprbck1r	100	76.023	ENSPREG00000014689	shrprbck1r	100	76.023	Poecilia_reticulata
ENSORLG00000007392	shrprbck1r	59	53.881	ENSPREG00000009702	sharpin	95	53.881	Poecilia_reticulata
ENSORLG00000007392	shrprbck1r	100	78.903	ENSPNYG00000022601	shrprbck1r	100	79.466	Pundamilia_nyererei
ENSORLG00000007392	shrprbck1r	55	53.728	ENSPNAG00000002911	sharpin	99	53.846	Pygocentrus_nattereri
ENSORLG00000007392	shrprbck1r	100	66.895	ENSPNAG00000007847	shrprbck1r	100	67.030	Pygocentrus_nattereri
ENSORLG00000007392	shrprbck1r	63	52.041	ENSSFOG00015004028	sharpin	99	52.505	Scleropages_formosus
ENSORLG00000007392	shrprbck1r	75	63.858	ENSSFOG00015014150	-	96	63.858	Scleropages_formosus
ENSORLG00000007392	shrprbck1r	100	77.191	ENSSMAG00000018085	shrprbck1r	100	77.330	Scophthalmus_maximus
ENSORLG00000007392	shrprbck1r	60	42.989	ENSSDUG00000019039	sharpin	96	42.989	Seriola_dumerili
ENSORLG00000007392	shrprbck1r	100	81.690	ENSSDUG00000002959	shrprbck1r	100	82.394	Seriola_dumerili
ENSORLG00000007392	shrprbck1r	100	80.845	ENSSLDG00000009026	shrprbck1r	100	81.549	Seriola_lalandi_dorsalis
ENSORLG00000007392	shrprbck1r	96	79.390	ENSSPAG00000016097	shrprbck1r	99	79.390	Stegastes_partitus
ENSORLG00000007392	shrprbck1r	60	50.115	ENSTRUG00000011046	sharpin	96	50.115	Takifugu_rubripes
ENSORLG00000007392	shrprbck1r	100	76.404	ENSTRUG00000006949	shrprbck1r	100	76.404	Takifugu_rubripes
ENSORLG00000007392	shrprbck1r	55	54.115	ENSTNIG00000008521	sharpin	94	54.115	Tetraodon_nigroviridis
ENSORLG00000007392	shrprbck1r	51	66.667	ENSXCOG00000015019	sharpin	96	66.667	Xiphophorus_couchianus
ENSORLG00000007392	shrprbck1r	100	75.387	ENSXCOG00000006701	shrprbck1r	100	75.387	Xiphophorus_couchianus
ENSORLG00000007392	shrprbck1r	59	54.462	ENSXMAG00000022076	sharpin	95	54.462	Xiphophorus_maculatus
ENSORLG00000007392	shrprbck1r	100	75.387	ENSXMAG00000018972	shrprbck1r	100	75.387	Xiphophorus_maculatus