EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000007443 (Gene tree)
Gene ID: 101162770
Gene Symbol: exosc2
Alias: -
Full Name: exosome component 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4362 bases
Position: chr12:12828255-12832616
Accession: 101162770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000038807	ECR1_N	PF14382.6	3.9e-16	1	1
ENSORLP00000009329	ECR1_N	PF14382.6	4.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000009330	-	1376	XM_004074770	ENSORLP00000009329	293 (aa)	XP_004074818	H2LTB1
ENSORLT00000042659	-	816	-	ENSORLP00000038807	271 (aa)	-	-

Gene Model

Click here to download ENSORLG00000007443's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007443	exosc2	100	77.474	ENSG00000130713	EXOSC2	100	77.474	Homo_sapiens
ENSORLG00000007443	exosc2	90	93.962	ENSAPOG00000008861	exosc2	97	93.962	Acanthochromis_polyacanthus
ENSORLG00000007443	exosc2	100	77.133	ENSAMEG00000016239	EXOSC2	100	77.133	Ailuropoda_melanoleuca
ENSORLG00000007443	exosc2	100	95.904	ENSACIG00000019054	exosc2	100	95.904	Amphilophus_citrinellus
ENSORLG00000007443	exosc2	100	95.563	ENSAOCG00000008577	exosc2	100	95.563	Amphiprion_ocellaris
ENSORLG00000007443	exosc2	100	95.563	ENSAOCG00000004983	exosc2	100	95.563	Amphiprion_ocellaris
ENSORLG00000007443	exosc2	100	95.563	ENSAPEG00000014088	exosc2	100	95.563	Amphiprion_percula
ENSORLG00000007443	exosc2	100	95.222	ENSATEG00000018680	exosc2	100	95.222	Anabas_testudineus
ENSORLG00000007443	exosc2	96	79.004	ENSAPLG00000012516	EXOSC2	97	79.004	Anas_platyrhynchos
ENSORLG00000007443	exosc2	99	75.685	ENSACAG00000002706	EXOSC2	99	75.685	Anolis_carolinensis
ENSORLG00000007443	exosc2	100	95.904	ENSACLG00000013613	exosc2	100	95.904	Astatotilapia_calliptera
ENSORLG00000007443	exosc2	100	86.780	ENSAMXG00000042605	exosc2	100	86.780	Astyanax_mexicanus
ENSORLG00000007443	exosc2	100	78.157	ENSBTAG00000048071	EXOSC2	100	78.157	Bos_taurus
ENSORLG00000007443	exosc2	97	41.608	WBGene00022232	exos-2	94	41.608	Caenorhabditis_elegans
ENSORLG00000007443	exosc2	100	77.474	ENSCJAG00000020537	EXOSC2	100	77.474	Callithrix_jacchus
ENSORLG00000007443	exosc2	99	76.370	ENSCAFG00000019941	EXOSC2	99	76.370	Canis_familiaris
ENSORLG00000007443	exosc2	100	76.451	ENSCAFG00020024047	EXOSC2	100	76.451	Canis_lupus_dingo
ENSORLG00000007443	exosc2	100	77.816	ENSCHIG00000021398	EXOSC2	100	77.816	Capra_hircus
ENSORLG00000007443	exosc2	100	77.133	ENSTSYG00000001805	EXOSC2	100	77.133	Carlito_syrichta
ENSORLG00000007443	exosc2	100	73.649	ENSCPOG00000005902	EXOSC2	100	73.649	Cavia_porcellus
ENSORLG00000007443	exosc2	100	77.474	ENSCCAG00000019749	EXOSC2	100	77.474	Cebus_capucinus
ENSORLG00000007443	exosc2	100	77.474	ENSCATG00000025389	-	100	77.474	Cercocebus_atys
ENSORLG00000007443	exosc2	100	76.792	ENSCLAG00000006195	EXOSC2	100	76.792	Chinchilla_lanigera
ENSORLG00000007443	exosc2	100	77.474	ENSCSAG00000014760	EXOSC2	100	77.474	Chlorocebus_sabaeus
ENSORLG00000007443	exosc2	100	76.451	ENSCHOG00000000858	EXOSC2	100	76.451	Choloepus_hoffmanni
ENSORLG00000007443	exosc2	99	76.712	ENSCPBG00000022626	EXOSC2	99	76.712	Chrysemys_picta_bellii
ENSORLG00000007443	exosc2	96	62.021	ENSCING00000014934	-	94	62.021	Ciona_intestinalis
ENSORLG00000007443	exosc2	92	64.130	ENSCSAVG00000003684	-	100	64.130	Ciona_savignyi
ENSORLG00000007443	exosc2	100	77.474	ENSCANG00000039828	-	100	77.474	Colobus_angolensis_palliatus
ENSORLG00000007443	exosc2	99	70.890	ENSCANG00000029298	-	99	70.890	Colobus_angolensis_palliatus
ENSORLG00000007443	exosc2	100	76.792	ENSCGRG00001013981	Exosc2	100	76.792	Cricetulus_griseus_chok1gshd
ENSORLG00000007443	exosc2	100	76.792	ENSCGRG00000017629	Exosc2	100	76.792	Cricetulus_griseus_crigri
ENSORLG00000007443	exosc2	100	92.491	ENSCSEG00000016539	exosc2	100	92.491	Cynoglossus_semilaevis
ENSORLG00000007443	exosc2	100	93.515	ENSCVAG00000022260	exosc2	100	93.515	Cyprinodon_variegatus
ENSORLG00000007443	exosc2	100	81.356	ENSDARG00000028688	exosc2	100	81.356	Danio_rerio
ENSORLG00000007443	exosc2	91	77.444	ENSDNOG00000025767	-	99	77.444	Dasypus_novemcinctus
ENSORLG00000007443	exosc2	100	77.816	ENSDORG00000009238	Exosc2	100	77.816	Dipodomys_ordii
ENSORLG00000007443	exosc2	98	58.478	FBgn0034879	Rrp4	97	59.516	Drosophila_melanogaster
ENSORLG00000007443	exosc2	92	64.945	ENSETEG00000016130	-	98	64.945	Echinops_telfairi
ENSORLG00000007443	exosc2	100	77.474	ENSEASG00005008475	EXOSC2	86	77.474	Equus_asinus_asinus
ENSORLG00000007443	exosc2	100	77.474	ENSECAG00000007897	EXOSC2	86	77.474	Equus_caballus
ENSORLG00000007443	exosc2	100	91.186	ENSELUG00000013641	exosc2	100	91.186	Esox_lucius
ENSORLG00000007443	exosc2	100	77.474	ENSFCAG00000025936	EXOSC2	100	77.474	Felis_catus
ENSORLG00000007443	exosc2	98	74.913	ENSFALG00000001446	EXOSC2	98	74.913	Ficedula_albicollis
ENSORLG00000007443	exosc2	100	75.768	ENSFDAG00000017196	EXOSC2	100	75.768	Fukomys_damarensis
ENSORLG00000007443	exosc2	100	95.222	ENSFHEG00000018571	exosc2	100	95.222	Fundulus_heteroclitus
ENSORLG00000007443	exosc2	100	85.811	ENSGMOG00000011785	exosc2	99	85.811	Gadus_morhua
ENSORLG00000007443	exosc2	99	79.452	ENSGALG00000040373	EXOSC2	99	79.452	Gallus_gallus
ENSORLG00000007443	exosc2	99	94.178	ENSGAFG00000010283	exosc2	99	94.178	Gambusia_affinis
ENSORLG00000007443	exosc2	100	91.809	ENSGACG00000016805	exosc2	99	92.771	Gasterosteus_aculeatus
ENSORLG00000007443	exosc2	87	80.392	ENSGAGG00000021026	EXOSC2	96	80.392	Gopherus_agassizii
ENSORLG00000007443	exosc2	100	76.792	ENSGGOG00000010578	EXOSC2	100	76.792	Gorilla_gorilla
ENSORLG00000007443	exosc2	100	96.587	ENSHBUG00000022437	exosc2	100	96.587	Haplochromis_burtoni
ENSORLG00000007443	exosc2	100	76.792	ENSHGLG00000012834	EXOSC2	100	76.792	Heterocephalus_glaber_female
ENSORLG00000007443	exosc2	100	76.792	ENSHGLG00100007092	EXOSC2	100	76.792	Heterocephalus_glaber_male
ENSORLG00000007443	exosc2	100	92.833	ENSHCOG00000019130	exosc2	100	92.833	Hippocampus_comes
ENSORLG00000007443	exosc2	100	85.085	ENSIPUG00000015397	exosc2	100	85.085	Ictalurus_punctatus
ENSORLG00000007443	exosc2	100	76.792	ENSSTOG00000005999	EXOSC2	100	76.792	Ictidomys_tridecemlineatus
ENSORLG00000007443	exosc2	100	76.792	ENSJJAG00000003188	Exosc2	100	76.792	Jaculus_jaculus
ENSORLG00000007443	exosc2	99	92.808	ENSKMAG00000017397	exosc2	99	92.808	Kryptolebias_marmoratus
ENSORLG00000007443	exosc2	100	92.150	ENSLBEG00000019269	exosc2	100	92.150	Labrus_bergylta
ENSORLG00000007443	exosc2	100	79.252	ENSLACG00000015530	EXOSC2	100	79.252	Latimeria_chalumnae
ENSORLG00000007443	exosc2	100	77.211	ENSLAFG00000006984	EXOSC2	100	77.211	Loxodonta_africana
ENSORLG00000007443	exosc2	100	66.553	ENSMFAG00000034160	-	84	66.553	Macaca_fascicularis
ENSORLG00000007443	exosc2	100	77.474	ENSMFAG00000000597	-	100	77.474	Macaca_fascicularis
ENSORLG00000007443	exosc2	100	74.403	ENSMMUG00000012498	EXOSC2	100	74.403	Macaca_mulatta
ENSORLG00000007443	exosc2	100	77.474	ENSMNEG00000031861	-	100	77.474	Macaca_nemestrina
ENSORLG00000007443	exosc2	100	67.235	ENSMNEG00000028704	-	91	67.235	Macaca_nemestrina
ENSORLG00000007443	exosc2	100	66.894	ENSMLEG00000029891	-	91	66.894	Mandrillus_leucophaeus
ENSORLG00000007443	exosc2	100	77.474	ENSMLEG00000042587	-	100	77.474	Mandrillus_leucophaeus
ENSORLG00000007443	exosc2	100	95.222	ENSMAMG00000012466	exosc2	100	95.222	Mastacembelus_armatus
ENSORLG00000007443	exosc2	100	95.222	ENSMZEG00005018737	exosc2	100	95.222	Maylandia_zebra
ENSORLG00000007443	exosc2	99	79.110	ENSMGAG00000005450	EXOSC2	99	79.110	Meleagris_gallopavo
ENSORLG00000007443	exosc2	100	76.792	ENSMAUG00000008299	Exosc2	100	76.792	Mesocricetus_auratus
ENSORLG00000007443	exosc2	100	77.816	ENSMICG00000015495	EXOSC2	100	77.816	Microcebus_murinus
ENSORLG00000007443	exosc2	100	77.133	ENSMOCG00000008262	Exosc2	100	77.133	Microtus_ochrogaster
ENSORLG00000007443	exosc2	100	93.515	ENSMMOG00000009616	exosc2	100	93.515	Mola_mola
ENSORLG00000007443	exosc2	100	77.133	ENSMODG00000012114	EXOSC2	100	77.133	Monodelphis_domestica
ENSORLG00000007443	exosc2	100	96.246	ENSMALG00000022132	exosc2	100	96.246	Monopterus_albus
ENSORLG00000007443	exosc2	100	76.792	MGP_CAROLIEiJ_G0023415	Exosc2	100	76.792	Mus_caroli
ENSORLG00000007443	exosc2	100	76.792	ENSMUSG00000039356	Exosc2	100	76.792	Mus_musculus
ENSORLG00000007443	exosc2	100	76.451	MGP_PahariEiJ_G0024872	Exosc2	100	76.451	Mus_pahari
ENSORLG00000007443	exosc2	100	76.792	MGP_SPRETEiJ_G0024332	Exosc2	100	76.792	Mus_spretus
ENSORLG00000007443	exosc2	100	77.474	ENSMPUG00000012686	EXOSC2	100	77.474	Mustela_putorius_furo
ENSORLG00000007443	exosc2	100	77.288	ENSMLUG00000008776	EXOSC2	100	77.288	Myotis_lucifugus
ENSORLG00000007443	exosc2	100	76.792	ENSNGAG00000019383	Exosc2	100	76.792	Nannospalax_galili
ENSORLG00000007443	exosc2	100	95.904	ENSNBRG00000005453	exosc2	100	95.904	Neolamprologus_brichardi
ENSORLG00000007443	exosc2	100	77.474	ENSNLEG00000012533	EXOSC2	100	77.474	Nomascus_leucogenys
ENSORLG00000007443	exosc2	100	61.433	ENSMEUG00000000795	EXOSC2	100	61.433	Notamacropus_eugenii
ENSORLG00000007443	exosc2	56	80.606	ENSOPRG00000008688	EXOSC2	56	80.606	Ochotona_princeps
ENSORLG00000007443	exosc2	100	75.768	ENSODEG00000016880	-	100	75.768	Octodon_degus
ENSORLG00000007443	exosc2	87	79.528	ENSODEG00000019513	-	100	79.528	Octodon_degus
ENSORLG00000007443	exosc2	100	95.904	ENSONIG00000014086	exosc2	100	95.904	Oreochromis_niloticus
ENSORLG00000007443	exosc2	100	74.403	ENSOANG00000001044	EXOSC2	100	74.403	Ornithorhynchus_anatinus
ENSORLG00000007443	exosc2	100	77.816	ENSOCUG00000007138	EXOSC2	100	77.816	Oryctolagus_cuniculus
ENSORLG00000007443	exosc2	100	99.659	ENSORLG00020018902	exosc2	100	99.659	Oryzias_latipes_hni
ENSORLG00000007443	exosc2	100	99.317	ENSORLG00015006767	exosc2	100	99.317	Oryzias_latipes_hsok
ENSORLG00000007443	exosc2	100	96.928	ENSOMEG00000003533	exosc2	100	96.928	Oryzias_melastigma
ENSORLG00000007443	exosc2	100	77.474	ENSOGAG00000007558	EXOSC2	100	77.474	Otolemur_garnettii
ENSORLG00000007443	exosc2	100	77.627	ENSOARG00000007438	EXOSC2	100	77.627	Ovis_aries
ENSORLG00000007443	exosc2	100	77.474	ENSPPAG00000034796	EXOSC2	100	77.474	Pan_paniscus
ENSORLG00000007443	exosc2	100	77.816	ENSPPRG00000001089	EXOSC2	100	77.816	Panthera_pardus
ENSORLG00000007443	exosc2	100	77.816	ENSPTIG00000021163	EXOSC2	100	77.816	Panthera_tigris_altaica
ENSORLG00000007443	exosc2	100	77.474	ENSPTRG00000045766	-	100	77.474	Pan_troglodytes
ENSORLG00000007443	exosc2	100	77.474	ENSPTRG00000021476	EXOSC2	100	77.474	Pan_troglodytes
ENSORLG00000007443	exosc2	100	77.474	ENSPANG00000025966	EXOSC2	100	77.474	Papio_anubis
ENSORLG00000007443	exosc2	99	84.083	ENSPKIG00000004271	exosc2	98	84.083	Paramormyrops_kingsleyae
ENSORLG00000007443	exosc2	99	76.712	ENSPSIG00000006743	EXOSC2	99	76.712	Pelodiscus_sinensis
ENSORLG00000007443	exosc2	86	94.862	ENSPMGG00000010980	exosc2	99	94.862	Periophthalmus_magnuspinnatus
ENSORLG00000007443	exosc2	100	77.133	ENSPEMG00000006345	Exosc2	100	77.133	Peromyscus_maniculatus_bairdii
ENSORLG00000007443	exosc2	100	73.220	ENSPMAG00000001280	exosc2	100	73.220	Petromyzon_marinus
ENSORLG00000007443	exosc2	100	77.133	ENSPCIG00000024122	EXOSC2	97	77.133	Phascolarctos_cinereus
ENSORLG00000007443	exosc2	99	94.539	ENSPFOG00000019819	exosc2	99	94.539	Poecilia_formosa
ENSORLG00000007443	exosc2	99	94.863	ENSPLAG00000004605	exosc2	99	94.863	Poecilia_latipinna
ENSORLG00000007443	exosc2	99	94.863	ENSPMEG00000010976	exosc2	99	94.863	Poecilia_mexicana
ENSORLG00000007443	exosc2	99	94.521	ENSPREG00000014306	exosc2	99	94.521	Poecilia_reticulata
ENSORLG00000007443	exosc2	100	77.474	ENSPPYG00000019695	EXOSC2	100	77.474	Pongo_abelii
ENSORLG00000007443	exosc2	100	78.157	ENSPCAG00000013400	EXOSC2	100	78.157	Procavia_capensis
ENSORLG00000007443	exosc2	100	77.474	ENSPCOG00000017639	EXOSC2	100	77.474	Propithecus_coquereli
ENSORLG00000007443	exosc2	100	76.792	ENSPVAG00000001513	EXOSC2	100	76.792	Pteropus_vampyrus
ENSORLG00000007443	exosc2	100	96.587	ENSPNYG00000007383	exosc2	100	96.587	Pundamilia_nyererei
ENSORLG00000007443	exosc2	100	88.095	ENSPNAG00000014281	exosc2	100	88.095	Pygocentrus_nattereri
ENSORLG00000007443	exosc2	100	77.474	ENSRNOG00000009245	Exosc2	100	77.474	Rattus_norvegicus
ENSORLG00000007443	exosc2	99	71.233	ENSRBIG00000029791	-	99	71.233	Rhinopithecus_bieti
ENSORLG00000007443	exosc2	100	77.474	ENSRBIG00000031203	-	100	77.474	Rhinopithecus_bieti
ENSORLG00000007443	exosc2	100	77.474	ENSRROG00000010827	-	100	77.474	Rhinopithecus_roxellana
ENSORLG00000007443	exosc2	99	70.205	ENSRROG00000043609	-	99	70.205	Rhinopithecus_roxellana
ENSORLG00000007443	exosc2	94	42.628	YHR069C	-	87	42.628	Saccharomyces_cerevisiae
ENSORLG00000007443	exosc2	100	77.133	ENSSBOG00000022712	EXOSC2	100	77.133	Saimiri_boliviensis_boliviensis
ENSORLG00000007443	exosc2	100	77.133	ENSSHAG00000016050	EXOSC2	100	77.133	Sarcophilus_harrisii
ENSORLG00000007443	exosc2	100	85.324	ENSSFOG00015011245	exosc2	100	85.324	Scleropages_formosus
ENSORLG00000007443	exosc2	100	93.174	ENSSMAG00000003112	exosc2	100	93.174	Scophthalmus_maximus
ENSORLG00000007443	exosc2	100	93.919	ENSSDUG00000004634	exosc2	100	93.919	Seriola_dumerili
ENSORLG00000007443	exosc2	100	94.881	ENSSLDG00000010616	exosc2	100	94.881	Seriola_lalandi_dorsalis
ENSORLG00000007443	exosc2	99	77.966	ENSSPUG00000013391	EXOSC2	99	77.966	Sphenodon_punctatus
ENSORLG00000007443	exosc2	100	95.563	ENSSPAG00000022947	exosc2	100	95.563	Stegastes_partitus
ENSORLG00000007443	exosc2	100	78.840	ENSSSCG00000005704	EXOSC2	100	78.840	Sus_scrofa
ENSORLG00000007443	exosc2	99	74.658	ENSTGUG00000004697	EXOSC2	99	74.658	Taeniopygia_guttata
ENSORLG00000007443	exosc2	100	84.983	ENSTRUG00000022436	exosc2	100	84.983	Takifugu_rubripes
ENSORLG00000007443	exosc2	100	73.038	ENSTTRG00000015159	EXOSC2	100	73.038	Tursiops_truncatus
ENSORLG00000007443	exosc2	95	75.451	ENSUAMG00000009651	EXOSC2	99	75.451	Ursus_americanus
ENSORLG00000007443	exosc2	100	77.133	ENSUMAG00000018726	EXOSC2	100	77.133	Ursus_maritimus
ENSORLG00000007443	exosc2	100	76.451	ENSVVUG00000027665	EXOSC2	100	76.451	Vulpes_vulpes
ENSORLG00000007443	exosc2	100	75.427	ENSXETG00000001340	exosc2	100	75.427	Xenopus_tropicalis
ENSORLG00000007443	exosc2	99	94.178	ENSXMAG00000005265	exosc2	99	94.178	Xiphophorus_maculatus