EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000007459 (Gene tree)
Gene ID: 101169955
Gene Symbol: sfpq
Alias: -
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 26205 bases
Position: chr11:17170326-17196530
Accession: 101169955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000009352	RRM_1	PF00076.22	4.5e-29	1	2
ENSORLP00000009352	RRM_1	PF00076.22	4.5e-29	2	2
ENSORLP00000009351	RRM_1	PF00076.22	4.7e-29	1	2
ENSORLP00000009351	RRM_1	PF00076.22	4.7e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000009352	-	2160	XM_004074074	ENSORLP00000009351	719 (aa)	XP_004074122	H2LTD3
ENSORLT00000009353	-	2076	-	ENSORLP00000009352	691 (aa)	-	H2LTD4

Gene Model

Click here to download ENSORLG00000007459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000007459	sfpq	52	60.163	ENSORLG00000004232	-	77	55.257
ENSORLG00000007459	sfpq	50	61.648	ENSORLG00000012801	nono	88	59.439

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007459	sfpq	57	72.158	ENSG00000116560	SFPQ	97	68.664	Homo_sapiens
ENSORLG00000007459	sfpq	66	80.585	ENSAPOG00000024257	sfpq	100	68.169	Acanthochromis_polyacanthus
ENSORLG00000007459	sfpq	57	72.158	ENSAMEG00000000815	SFPQ	98	72.158	Ailuropoda_melanoleuca
ENSORLG00000007459	sfpq	98	75.822	ENSACIG00000000905	sfpq	100	85.024	Amphilophus_citrinellus
ENSORLG00000007459	sfpq	66	80.585	ENSAOCG00000002889	sfpq	100	67.871	Amphiprion_ocellaris
ENSORLG00000007459	sfpq	66	80.585	ENSAPEG00000016556	sfpq	100	67.871	Amphiprion_percula
ENSORLG00000007459	sfpq	100	65.007	ENSATEG00000002981	sfpq	100	66.297	Anabas_testudineus
ENSORLG00000007459	sfpq	55	64.128	ENSANAG00000027438	-	61	62.857	Aotus_nancymaae
ENSORLG00000007459	sfpq	100	69.307	ENSACLG00000022332	sfpq	100	68.956	Astatotilapia_calliptera
ENSORLG00000007459	sfpq	70	69.727	ENSAMXG00000011538	sfpq	89	62.932	Astyanax_mexicanus
ENSORLG00000007459	sfpq	57	72.158	ENSBTAG00000016328	SFPQ	72	65.422	Bos_taurus
ENSORLG00000007459	sfpq	57	72.158	ENSCJAG00000001431	SFPQ	87	57.604	Callithrix_jacchus
ENSORLG00000007459	sfpq	57	72.158	ENSCAFG00000003595	-	89	57.367	Canis_familiaris
ENSORLG00000007459	sfpq	57	69.142	ENSCAFG00000018271	-	90	54.180	Canis_familiaris
ENSORLG00000007459	sfpq	55	69.610	ENSCAFG00000017608	-	74	61.417	Canis_familiaris
ENSORLG00000007459	sfpq	57	69.142	ENSCAFG00020004881	-	90	54.334	Canis_lupus_dingo
ENSORLG00000007459	sfpq	57	72.158	ENSCHIG00000023097	SFPQ	93	54.772	Capra_hircus
ENSORLG00000007459	sfpq	57	72.158	ENSCCAG00000029361	-	87	57.734	Cebus_capucinus
ENSORLG00000007459	sfpq	51	75.562	ENSCATG00000036179	-	81	56.588	Cercocebus_atys
ENSORLG00000007459	sfpq	57	49.087	ENSCATG00000032664	-	87	41.426	Cercocebus_atys
ENSORLG00000007459	sfpq	57	72.158	ENSCSAG00000001082	SFPQ	87	57.734	Chlorocebus_sabaeus
ENSORLG00000007459	sfpq	50	70.079	ENSCHOG00000009131	SFPQ	100	70.079	Choloepus_hoffmanni
ENSORLG00000007459	sfpq	58	71.136	ENSCPBG00000018674	SFPQ	68	71.298	Chrysemys_picta_bellii
ENSORLG00000007459	sfpq	57	71.694	ENSCGRG00001011698	Sfpq	87	57.165	Cricetulus_griseus_chok1gshd
ENSORLG00000007459	sfpq	57	71.628	ENSCGRG00000010128	Sfpq	95	71.694	Cricetulus_griseus_crigri
ENSORLG00000007459	sfpq	100	62.691	ENSCSEG00000007852	sfpq	100	62.691	Cynoglossus_semilaevis
ENSORLG00000007459	sfpq	100	67.503	ENSCVAG00000019538	sfpq	100	66.358	Cyprinodon_variegatus
ENSORLG00000007459	sfpq	57	77.804	ENSDARG00000011564	sfpq	100	87.826	Danio_rerio
ENSORLG00000007459	sfpq	57	72.158	ENSDNOG00000049454	SFPQ	92	56.728	Dasypus_novemcinctus
ENSORLG00000007459	sfpq	57	72.158	ENSDORG00000008109	Sfpq	87	57.662	Dipodomys_ordii
ENSORLG00000007459	sfpq	57	65.661	ENSETEG00000001095	SFPQ	61	61.538	Echinops_telfairi
ENSORLG00000007459	sfpq	57	72.158	ENSEASG00005012012	SFPQ	87	58.637	Equus_asinus_asinus
ENSORLG00000007459	sfpq	57	72.158	ENSECAG00000000642	SFPQ	87	58.637	Equus_caballus
ENSORLG00000007459	sfpq	57	72.158	ENSFCAG00000042862	SFPQ	90	58.129	Felis_catus
ENSORLG00000007459	sfpq	100	67.721	ENSFHEG00000015200	sfpq	100	68.533	Fundulus_heteroclitus
ENSORLG00000007459	sfpq	79	74.841	ENSGMOG00000011957	sfpq	99	64.368	Gadus_morhua
ENSORLG00000007459	sfpq	77	81.340	ENSGMOG00000011950	SFPQ	99	75.316	Gadus_morhua
ENSORLG00000007459	sfpq	56	73.282	ENSGALG00000002514	SFPQ	90	58.833	Gallus_gallus
ENSORLG00000007459	sfpq	100	68.919	ENSGAFG00000014571	sfpq	100	64.333	Gambusia_affinis
ENSORLG00000007459	sfpq	100	66.116	ENSGACG00000002034	sfpq	100	66.301	Gasterosteus_aculeatus
ENSORLG00000007459	sfpq	57	72.158	ENSGGOG00000026354	SFPQ	100	69.886	Gorilla_gorilla
ENSORLG00000007459	sfpq	100	69.796	ENSHBUG00000016818	sfpq	100	68.207	Haplochromis_burtoni
ENSORLG00000007459	sfpq	57	71.198	ENSHGLG00000012001	SFPQ	73	64.327	Heterocephalus_glaber_female
ENSORLG00000007459	sfpq	100	62.549	ENSHCOG00000008612	sfpq	100	69.783	Hippocampus_comes
ENSORLG00000007459	sfpq	58	73.239	ENSIPUG00000013076	SFPQ	83	69.121	Ictalurus_punctatus
ENSORLG00000007459	sfpq	57	72.158	ENSJJAG00000015633	Sfpq	72	65.422	Jaculus_jaculus
ENSORLG00000007459	sfpq	100	66.247	ENSKMAG00000000238	sfpq	100	65.322	Kryptolebias_marmoratus
ENSORLG00000007459	sfpq	100	63.624	ENSLBEG00000003163	sfpq	98	66.532	Labrus_bergylta
ENSORLG00000007459	sfpq	57	67.674	ENSLACG00000014728	SFPQ	70	70.465	Latimeria_chalumnae
ENSORLG00000007459	sfpq	95	53.814	ENSLOCG00000001067	sfpq	72	75.490	Lepisosteus_oculatus
ENSORLG00000007459	sfpq	57	71.926	ENSLAFG00000015951	SFPQ	95	57.987	Loxodonta_africana
ENSORLG00000007459	sfpq	57	72.158	ENSMFAG00000000797	SFPQ	87	57.734	Macaca_fascicularis
ENSORLG00000007459	sfpq	57	72.158	ENSMMUG00000019154	SFPQ	87	58.552	Macaca_mulatta
ENSORLG00000007459	sfpq	57	72.158	ENSMNEG00000038895	SFPQ	87	57.734	Macaca_nemestrina
ENSORLG00000007459	sfpq	100	75.092	ENSMAMG00000007875	sfpq	100	67.769	Mastacembelus_armatus
ENSORLG00000007459	sfpq	100	70.014	ENSMZEG00005026091	sfpq	100	68.407	Maylandia_zebra
ENSORLG00000007459	sfpq	50	68.957	ENSMGAG00000004237	SFPQ	100	68.702	Meleagris_gallopavo
ENSORLG00000007459	sfpq	57	71.694	ENSMAUG00000006402	Sfpq	88	57.254	Mesocricetus_auratus
ENSORLG00000007459	sfpq	57	72.158	ENSMICG00000027265	SFPQ	84	57.845	Microcebus_murinus
ENSORLG00000007459	sfpq	57	69.142	ENSMOCG00000019075	Sfpq	98	65.063	Microtus_ochrogaster
ENSORLG00000007459	sfpq	100	66.116	ENSMMOG00000001074	sfpq	100	65.152	Mola_mola
ENSORLG00000007459	sfpq	55	74.805	ENSMODG00000017937	SFPQ	76	65.896	Monodelphis_domestica
ENSORLG00000007459	sfpq	100	63.194	ENSMALG00000010381	sfpq	100	65.840	Monopterus_albus
ENSORLG00000007459	sfpq	57	71.694	MGP_CAROLIEiJ_G0026487	Sfpq	72	65.029	Mus_caroli
ENSORLG00000007459	sfpq	57	71.694	ENSMUSG00000028820	Sfpq	72	65.029	Mus_musculus
ENSORLG00000007459	sfpq	57	71.694	MGP_PahariEiJ_G0028818	Sfpq	83	56.894	Mus_pahari
ENSORLG00000007459	sfpq	57	71.694	MGP_SPRETEiJ_G0027466	Sfpq	72	65.029	Mus_spretus
ENSORLG00000007459	sfpq	57	71.926	ENSMLUG00000027090	SFPQ	99	70.089	Myotis_lucifugus
ENSORLG00000007459	sfpq	57	71.926	ENSNGAG00000000888	Sfpq	87	57.390	Nannospalax_galili
ENSORLG00000007459	sfpq	100	69.793	ENSNBRG00000017479	sfpq	100	68.587	Neolamprologus_brichardi
ENSORLG00000007459	sfpq	55	74.805	ENSMEUG00000014082	SFPQ	61	72.727	Notamacropus_eugenii
ENSORLG00000007459	sfpq	57	72.158	ENSOPRG00000013696	SFPQ	61	72.158	Ochotona_princeps
ENSORLG00000007459	sfpq	55	63.158	ENSODEG00000005485	SFPQ	91	57.545	Octodon_degus
ENSORLG00000007459	sfpq	100	70.110	ENSONIG00000017737	sfpq	100	68.474	Oreochromis_niloticus
ENSORLG00000007459	sfpq	57	72.158	ENSOCUG00000001877	SFPQ	85	72.158	Oryctolagus_cuniculus
ENSORLG00000007459	sfpq	100	98.064	ENSORLG00020011818	sfpq	100	98.064	Oryzias_latipes_hni
ENSORLG00000007459	sfpq	100	97.787	ENSORLG00015002131	sfpq	100	97.787	Oryzias_latipes_hsok
ENSORLG00000007459	sfpq	100	88.482	ENSOMEG00000018020	sfpq	100	87.534	Oryzias_melastigma
ENSORLG00000007459	sfpq	57	72.158	ENSOGAG00000027710	SFPQ	94	66.004	Otolemur_garnettii
ENSORLG00000007459	sfpq	57	72.158	ENSOARG00000019439	SFPQ	66	72.158	Ovis_aries
ENSORLG00000007459	sfpq	57	72.158	ENSPPAG00000030078	SFPQ	61	72.158	Pan_paniscus
ENSORLG00000007459	sfpq	57	66.357	ENSPTRG00000000518	SFPQ	86	52.680	Pan_troglodytes
ENSORLG00000007459	sfpq	57	72.158	ENSPANG00000005380	SFPQ	75	65.226	Papio_anubis
ENSORLG00000007459	sfpq	74	66.667	ENSPKIG00000023035	sfpq	73	78.251	Paramormyrops_kingsleyae
ENSORLG00000007459	sfpq	57	72.622	ENSPSIG00000011494	SFPQ	99	72.390	Pelodiscus_sinensis
ENSORLG00000007459	sfpq	80	83.976	ENSPMGG00000023883	sfpq	100	60.067	Periophthalmus_magnuspinnatus
ENSORLG00000007459	sfpq	57	71.694	ENSPEMG00000009794	Sfpq	96	67.735	Peromyscus_maniculatus_bairdii
ENSORLG00000007459	sfpq	55	74.805	ENSPCIG00000000923	SFPQ	73	65.511	Phascolarctos_cinereus
ENSORLG00000007459	sfpq	100	68.194	ENSPFOG00000003127	sfpq	100	66.365	Poecilia_formosa
ENSORLG00000007459	sfpq	100	68.835	ENSPREG00000008060	sfpq	100	67.024	Poecilia_reticulata
ENSORLG00000007459	sfpq	57	72.158	ENSPPYG00000001560	SFPQ	87	56.508	Pongo_abelii
ENSORLG00000007459	sfpq	57	71.628	ENSPCAG00000006164	SFPQ	60	71.628	Procavia_capensis
ENSORLG00000007459	sfpq	57	72.158	ENSPCOG00000027127	SFPQ	84	57.686	Propithecus_coquereli
ENSORLG00000007459	sfpq	57	70.396	ENSPVAG00000001865	SFPQ	90	55.287	Pteropus_vampyrus
ENSORLG00000007459	sfpq	61	83.070	ENSPNYG00000007494	sfpq	100	68.486	Pundamilia_nyererei
ENSORLG00000007459	sfpq	73	67.712	ENSPNAG00000002128	sfpq	71	79.952	Pygocentrus_nattereri
ENSORLG00000007459	sfpq	57	71.694	ENSRNOG00000058461	Sfpq	73	65.029	Rattus_norvegicus
ENSORLG00000007459	sfpq	58	65.148	ENSRBIG00000035286	SFPQ	100	69.886	Rhinopithecus_bieti
ENSORLG00000007459	sfpq	57	72.158	ENSRROG00000040992	SFPQ	100	69.886	Rhinopithecus_roxellana
ENSORLG00000007459	sfpq	55	74.419	ENSSHAG00000016107	-	96	69.643	Sarcophilus_harrisii
ENSORLG00000007459	sfpq	57	79.858	ENSSFOG00015009289	sfpq	77	80.095	Scleropages_formosus
ENSORLG00000007459	sfpq	93	79.574	ENSSMAG00000018201	sfpq	100	65.295	Scophthalmus_maximus
ENSORLG00000007459	sfpq	100	69.114	ENSSDUG00000008402	sfpq	100	67.862	Seriola_dumerili
ENSORLG00000007459	sfpq	100	68.975	ENSSLDG00000018917	sfpq	100	67.813	Seriola_lalandi_dorsalis
ENSORLG00000007459	sfpq	100	68.923	ENSSPAG00000016550	sfpq	100	68.486	Stegastes_partitus
ENSORLG00000007459	sfpq	57	72.158	ENSSSCG00000035690	SFPQ	72	65.422	Sus_scrofa
ENSORLG00000007459	sfpq	55	74.352	ENSTGUG00000001722	SFPQ	99	72.158	Taeniopygia_guttata
ENSORLG00000007459	sfpq	100	67.034	ENSTRUG00000003783	sfpq	100	66.620	Takifugu_rubripes
ENSORLG00000007459	sfpq	88	68.031	ENSTNIG00000011331	sfpq	99	67.982	Tetraodon_nigroviridis
ENSORLG00000007459	sfpq	57	69.535	ENSTTRG00000013930	SFPQ	83	56.487	Tursiops_truncatus
ENSORLG00000007459	sfpq	65	65.577	ENSXETG00000009682	sfpq	98	76.901	Xenopus_tropicalis
ENSORLG00000007459	sfpq	100	69.155	ENSXMAG00000016391	sfpq	100	68.600	Xiphophorus_maculatus