EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000007614 (Gene tree)
Gene ID: 100049188
Gene Symbol: eef1a
Alias: -
Full Name: elongation factor 1 alpha
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 2110 bases
Position: chr11:17258988-17261097
Accession: 100049188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000009543	GTP_EFTU	PF00009.27	2.3e-53	1	1
ENSORLP00000009543	GTP_EFTU_D2	PF03144.25	1.2e-14	1	1
ENSORLP00000009543	GTP_EFTU_D3	PF03143.17	5.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000009544	-	1386	XM_011480957	ENSORLP00000009543	461 (aa)	XP_011479259	Q9YIC0

Gene Model

Click here to download ENSORLG00000007614's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007614's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000007614	eef1a	95	41.190	ENSORLG00000016559	hbs1l	61	41.190
ENSORLG00000007614	eef1a	95	38.322	ENSORLG00000002867	-	73	38.375
ENSORLG00000007614	eef1a	96	70.136	ENSORLG00000019066	si:dkey-37o8.1	97	70.136
ENSORLG00000007614	eef1a	100	91.558	ENSORLG00000007585	-	97	92.411
ENSORLG00000007614	eef1a	96	38.826	ENSORLG00000026597	gspt1l	76	39.180
ENSORLG00000007614	eef1a	96	84.009	ENSORLG00000002258	EEF1A1	64	84.009

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007614	eef1a	100	94.794	ENSAPOG00000004714	-	100	94.794	Acanthochromis_polyacanthus
ENSORLG00000007614	eef1a	90	95.157	ENSACIG00000001219	-	97	95.285	Amphilophus_citrinellus
ENSORLG00000007614	eef1a	100	91.757	ENSAOCG00000022039	-	98	92.239	Amphiprion_ocellaris
ENSORLG00000007614	eef1a	87	96.030	ENSAOCG00000022002	-	98	96.030	Amphiprion_ocellaris
ENSORLG00000007614	eef1a	100	92.191	ENSAPEG00000016361	-	98	92.683	Amphiprion_percula
ENSORLG00000007614	eef1a	98	95.787	ENSATEG00000003244	-	95	95.787	Anabas_testudineus
ENSORLG00000007614	eef1a	100	95.228	ENSACLG00000022560	-	98	95.344	Astatotilapia_calliptera
ENSORLG00000007614	eef1a	100	82.684	WBGene00001168	eef-1A.1	98	83.186	Caenorhabditis_elegans
ENSORLG00000007614	eef1a	100	82.684	WBGene00001169	eef-1A.2	98	83.186	Caenorhabditis_elegans
ENSORLG00000007614	eef1a	98	81.319	ENSCING00000005126	-	98	81.319	Ciona_intestinalis
ENSORLG00000007614	eef1a	99	83.843	ENSCING00000021478	-	98	84.410	Ciona_intestinalis
ENSORLG00000007614	eef1a	100	78.326	ENSCING00000007703	-	97	78.509	Ciona_intestinalis
ENSORLG00000007614	eef1a	98	80.617	ENSCING00000018894	-	97	80.617	Ciona_intestinalis
ENSORLG00000007614	eef1a	99	83.807	ENSCSAVG00000006357	-	96	94.000	Ciona_savignyi
ENSORLG00000007614	eef1a	99	76.471	ENSCSAVG00000001085	-	89	77.578	Ciona_savignyi
ENSORLG00000007614	eef1a	98	80.392	ENSCSAVG00000003196	-	98	80.392	Ciona_savignyi
ENSORLG00000007614	eef1a	98	82.637	ENSCSAVG00000009663	-	98	82.637	Ciona_savignyi
ENSORLG00000007614	eef1a	98	95.565	ENSCSEG00000008011	-	98	95.565	Cynoglossus_semilaevis
ENSORLG00000007614	eef1a	89	85.194	ENSCSEG00000007992	-	97	85.360	Cynoglossus_semilaevis
ENSORLG00000007614	eef1a	90	85.507	ENSCSEG00000007972	-	98	85.891	Cynoglossus_semilaevis
ENSORLG00000007614	eef1a	100	97.831	ENSCVAG00000019356	-	100	97.831	Cyprinodon_variegatus
ENSORLG00000007614	eef1a	100	86.364	FBgn0284245	eEF1alpha1	97	86.830	Drosophila_melanogaster
ENSORLG00000007614	eef1a	98	85.398	FBgn0000557	eEF1alpha2	98	85.398	Drosophila_melanogaster
ENSORLG00000007614	eef1a	99	82.391	ENSEBUG00000015814	-	98	82.927	Eptatretus_burgeri
ENSORLG00000007614	eef1a	100	98.265	ENSFHEG00000015054	-	100	98.265	Fundulus_heteroclitus
ENSORLG00000007614	eef1a	100	97.397	ENSGAFG00000014646	-	100	97.397	Gambusia_affinis
ENSORLG00000007614	eef1a	100	93.059	ENSGACG00000002143	-	98	93.348	Gasterosteus_aculeatus
ENSORLG00000007614	eef1a	98	95.344	ENSGACG00000002182	-	98	95.344	Gasterosteus_aculeatus
ENSORLG00000007614	eef1a	55	92.490	ENSHBUG00000017166	-	91	92.593	Haplochromis_burtoni
ENSORLG00000007614	eef1a	99	85.466	ENSHCOG00000008489	-	96	86.652	Hippocampus_comes
ENSORLG00000007614	eef1a	98	94.457	ENSHCOG00000008468	-	98	94.457	Hippocampus_comes
ENSORLG00000007614	eef1a	98	95.122	ENSLBEG00000002759	-	98	95.122	Labrus_bergylta
ENSORLG00000007614	eef1a	99	84.565	ENSLBEG00000002955	-	98	84.701	Labrus_bergylta
ENSORLG00000007614	eef1a	100	97.180	ENSMAMG00000007715	-	100	97.180	Mastacembelus_armatus
ENSORLG00000007614	eef1a	99	76.316	ENSMMOG00000018160	-	95	88.043	Mola_mola
ENSORLG00000007614	eef1a	98	93.792	ENSMMOG00000001165	-	100	96.591	Mola_mola
ENSORLG00000007614	eef1a	99	86.522	ENSMMOG00000001106	-	98	86.918	Mola_mola
ENSORLG00000007614	eef1a	100	84.382	ENSNBRG00000017346	-	97	84.257	Neolamprologus_brichardi
ENSORLG00000007614	eef1a	76	92.614	ENSONIG00000017760	-	98	92.614	Oreochromis_niloticus
ENSORLG00000007614	eef1a	100	99.783	ENSORLG00015002397	-	100	99.783	Oryzias_latipes_hsok
ENSORLG00000007614	eef1a	100	98.915	ENSOMEG00000018226	-	100	98.915	Oryzias_melastigma
ENSORLG00000007614	eef1a	98	94.912	ENSPMGG00000023911	-	99	95.111	Periophthalmus_magnuspinnatus
ENSORLG00000007614	eef1a	95	48.975	ENSPMGG00000022427	-	96	60.000	Periophthalmus_magnuspinnatus
ENSORLG00000007614	eef1a	100	97.180	ENSPFOG00000003924	-	100	97.094	Poecilia_formosa
ENSORLG00000007614	eef1a	100	97.180	ENSPLAG00000004316	-	100	97.180	Poecilia_latipinna
ENSORLG00000007614	eef1a	100	96.963	ENSPMEG00000001010	-	100	96.963	Poecilia_mexicana
ENSORLG00000007614	eef1a	100	96.746	ENSPREG00000008243	-	100	96.746	Poecilia_reticulata
ENSORLG00000007614	eef1a	100	95.228	ENSPNYG00000007263	-	98	95.344	Pundamilia_nyererei
ENSORLG00000007614	eef1a	97	81.124	YPR080W	TEF1	98	80.488	Saccharomyces_cerevisiae
ENSORLG00000007614	eef1a	97	81.124	YBR118W	TEF2	98	80.488	Saccharomyces_cerevisiae
ENSORLG00000007614	eef1a	98	83.298	ENSSMAG00000018469	-	98	83.298	Scophthalmus_maximus
ENSORLG00000007614	eef1a	53	92.623	ENSSMAG00000016277	-	96	92.623	Scophthalmus_maximus
ENSORLG00000007614	eef1a	100	96.529	ENSSDUG00000008198	-	100	96.529	Seriola_dumerili
ENSORLG00000007614	eef1a	98	94.678	ENSSPAG00000001710	-	98	94.678	Stegastes_partitus
ENSORLG00000007614	eef1a	98	94.900	ENSTRUG00000005727	ef-1a	98	94.900	Takifugu_rubripes
ENSORLG00000007614	eef1a	99	86.304	ENSTRUG00000005066	-	98	86.696	Takifugu_rubripes
ENSORLG00000007614	eef1a	98	95.565	ENSTNIG00000002619	-	98	95.565	Tetraodon_nigroviridis
ENSORLG00000007614	eef1a	99	82.391	ENSTNIG00000002617	-	94	84.187	Tetraodon_nigroviridis
ENSORLG00000007614	eef1a	100	97.180	ENSXCOG00000001542	-	100	97.778	Xiphophorus_couchianus