EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000007627 (Gene tree)
Gene ID: 101156876
Gene Symbol: kars
Alias: -
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7743 bases
Position: chr3:20428965-20436707
Accession: 101156876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000009556	tRNA_anti-codon	PF01336.25	1e-12	1	1
ENSORLP00000037148	tRNA_anti-codon	PF01336.25	1.7e-12	1	1
ENSORLP00000009558	tRNA_anti-codon	PF01336.25	1.8e-12	1	1
ENSORLP00000009558	tRNA-synt_2	PF00152.20	1.1e-78	1	1
ENSORLP00000009556	tRNA-synt_2	PF00152.20	1.2e-74	1	1
ENSORLP00000037148	tRNA-synt_2	PF00152.20	1.2e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000037257	-	4043	-	ENSORLP00000037148	596 (aa)	-	-
ENSORLT00000009557	-	4009	XM_004066992	ENSORLP00000009556	594 (aa)	XP_004067040	H2LTY3
ENSORLT00000009559	-	2524	XM_011489107	ENSORLP00000009558	611 (aa)	XP_011487409	H2LTY5

Gene Model

Click here to download ENSORLG00000007627's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007627	kars	98	77.355	ENSG00000065427	KARS	100	90.196	Homo_sapiens
ENSORLG00000007627	kars	99	88.158	ENSAPOG00000010997	kars	99	87.829	Acanthochromis_polyacanthus
ENSORLG00000007627	kars	99	76.480	ENSAMEG00000005347	KARS	97	76.480	Ailuropoda_melanoleuca
ENSORLG00000007627	kars	99	85.033	ENSACIG00000000304	kars	98	86.572	Amphilophus_citrinellus
ENSORLG00000007627	kars	99	90.323	ENSAOCG00000012971	kars	97	91.921	Amphiprion_ocellaris
ENSORLG00000007627	kars	99	89.474	ENSAPEG00000011144	kars	99	89.474	Amphiprion_percula
ENSORLG00000007627	kars	99	87.007	ENSATEG00000004954	kars	98	88.516	Anabas_testudineus
ENSORLG00000007627	kars	90	80.483	ENSAPLG00000012705	KARS	97	80.935	Anas_platyrhynchos
ENSORLG00000007627	kars	92	79.091	ENSACAG00000007577	KARS	88	80.287	Anolis_carolinensis
ENSORLG00000007627	kars	98	77.521	ENSANAG00000030403	-	95	81.129	Aotus_nancymaae
ENSORLG00000007627	kars	97	64.618	ENSANAG00000031739	-	96	63.607	Aotus_nancymaae
ENSORLG00000007627	kars	99	90.625	ENSACLG00000001613	kars	99	90.625	Astatotilapia_calliptera
ENSORLG00000007627	kars	99	86.020	ENSAMXG00000030719	kars	98	88.516	Astyanax_mexicanus
ENSORLG00000007627	kars	94	80.106	ENSBTAG00000015677	KARS	72	81.996	Bos_taurus
ENSORLG00000007627	kars	96	56.649	WBGene00002238	kars-1	97	63.200	Caenorhabditis_elegans
ENSORLG00000007627	kars	99	76.911	ENSCJAG00000014213	KARS	97	80.104	Callithrix_jacchus
ENSORLG00000007627	kars	99	77.162	ENSCAFG00000020069	KARS	97	77.162	Canis_familiaris
ENSORLG00000007627	kars	99	77.162	ENSCAFG00020001721	KARS	96	80.560	Canis_lupus_dingo
ENSORLG00000007627	kars	99	76.961	ENSCHIG00000014108	-	96	80.702	Capra_hircus
ENSORLG00000007627	kars	92	79.255	ENSCHIG00000016073	-	89	80.524	Capra_hircus
ENSORLG00000007627	kars	98	78.146	ENSTSYG00000001643	KARS	96	82.883	Carlito_syrichta
ENSORLG00000007627	kars	99	72.112	ENSCAPG00000016234	KARS	96	72.112	Cavia_aperea
ENSORLG00000007627	kars	99	78.053	ENSCPOG00000012036	KARS	95	81.947	Cavia_porcellus
ENSORLG00000007627	kars	92	64.674	ENSCCAG00000030337	-	98	66.045	Cebus_capucinus
ENSORLG00000007627	kars	98	77.686	ENSCCAG00000034307	-	95	81.305	Cebus_capucinus
ENSORLG00000007627	kars	98	76.529	ENSCATG00000038129	KARS	96	79.438	Cercocebus_atys
ENSORLG00000007627	kars	99	76.961	ENSCLAG00000007905	KARS	96	80.385	Chinchilla_lanigera
ENSORLG00000007627	kars	98	76.694	ENSCSAG00000003664	KARS	96	76.694	Chlorocebus_sabaeus
ENSORLG00000007627	kars	73	87.126	ENSCHOG00000013447	KARS	72	87.082	Choloepus_hoffmanni
ENSORLG00000007627	kars	87	72.264	ENSCPBG00000002553	-	95	72.264	Chrysemys_picta_bellii
ENSORLG00000007627	kars	97	79.293	ENSCPBG00000026969	KARS	98	80.690	Chrysemys_picta_bellii
ENSORLG00000007627	kars	93	67.329	ENSCING00000009513	-	96	67.329	Ciona_intestinalis
ENSORLG00000007627	kars	94	68.750	ENSCSAVG00000007684	-	96	70.018	Ciona_savignyi
ENSORLG00000007627	kars	52	72.727	ENSCSAVG00000001136	-	96	75.600	Ciona_savignyi
ENSORLG00000007627	kars	98	72.893	ENSCANG00000032813	KARS	96	75.436	Colobus_angolensis_palliatus
ENSORLG00000007627	kars	99	78.033	ENSCGRG00001004055	KARS	95	81.658	Cricetulus_griseus_chok1gshd
ENSORLG00000007627	kars	99	78.033	ENSCGRG00000014242	KARS	95	81.658	Cricetulus_griseus_crigri
ENSORLG00000007627	kars	99	87.521	ENSCSEG00000008324	kars	98	89.771	Cynoglossus_semilaevis
ENSORLG00000007627	kars	99	88.158	ENSCVAG00000019686	kars	98	90.459	Cyprinodon_variegatus
ENSORLG00000007627	kars	99	84.829	ENSDARG00000103799	kars	99	90.643	Danio_rerio
ENSORLG00000007627	kars	98	77.851	ENSDNOG00000002241	KARS	96	77.851	Dasypus_novemcinctus
ENSORLG00000007627	kars	99	76.771	ENSDORG00000004780	-	96	80.385	Dipodomys_ordii
ENSORLG00000007627	kars	93	63.604	ENSDORG00000024214	-	95	62.923	Dipodomys_ordii
ENSORLG00000007627	kars	96	66.779	FBgn0027084	LysRS	97	69.821	Drosophila_melanogaster
ENSORLG00000007627	kars	99	76.961	ENSETEG00000008353	KARS	97	76.961	Echinops_telfairi
ENSORLG00000007627	kars	92	71.691	ENSEBUG00000001284	-	93	71.691	Eptatretus_burgeri
ENSORLG00000007627	kars	98	78.441	ENSEASG00005013497	KARS	96	80.769	Equus_asinus_asinus
ENSORLG00000007627	kars	93	81.172	ENSECAG00000013424	KARS	96	80.769	Equus_caballus
ENSORLG00000007627	kars	98	71.026	ENSEEUG00000007042	KARS	96	71.026	Erinaceus_europaeus
ENSORLG00000007627	kars	92	82.416	ENSELUG00000014575	kars	96	82.416	Esox_lucius
ENSORLG00000007627	kars	99	76.974	ENSFCAG00000008573	KARS	97	79.585	Felis_catus
ENSORLG00000007627	kars	92	79.964	ENSFALG00000002543	KARS	96	79.929	Ficedula_albicollis
ENSORLG00000007627	kars	99	78.089	ENSFDAG00000007155	KARS	95	81.625	Fukomys_damarensis
ENSORLG00000007627	kars	99	87.171	ENSFHEG00000006172	kars	98	89.046	Fundulus_heteroclitus
ENSORLG00000007627	kars	99	84.288	ENSGMOG00000002633	kars	99	84.288	Gadus_morhua
ENSORLG00000007627	kars	92	81.204	ENSGALG00000000907	KARS	97	81.475	Gallus_gallus
ENSORLG00000007627	kars	99	87.705	ENSGAFG00000017252	kars	100	87.705	Gambusia_affinis
ENSORLG00000007627	kars	99	87.234	ENSGACG00000015749	kars	99	87.234	Gasterosteus_aculeatus
ENSORLG00000007627	kars	87	72.264	ENSGAGG00000011960	-	97	73.129	Gopherus_agassizii
ENSORLG00000007627	kars	96	79.188	ENSGAGG00000023836	KARS	95	81.947	Gopherus_agassizii
ENSORLG00000007627	kars	98	77.190	ENSGGOG00000005515	KARS	95	80.776	Gorilla_gorilla
ENSORLG00000007627	kars	99	90.625	ENSHBUG00000013619	kars	99	90.625	Haplochromis_burtoni
ENSORLG00000007627	kars	93	65.957	ENSHGLG00000001298	-	93	65.957	Heterocephalus_glaber_female
ENSORLG00000007627	kars	93	71.685	ENSHGLG00000015235	-	93	71.685	Heterocephalus_glaber_female
ENSORLG00000007627	kars	99	78.254	ENSHGLG00000011898	KARS	95	81.625	Heterocephalus_glaber_female
ENSORLG00000007627	kars	99	78.254	ENSHGLG00100012264	KARS	95	81.625	Heterocephalus_glaber_male
ENSORLG00000007627	kars	93	65.780	ENSHGLG00100006466	-	93	65.780	Heterocephalus_glaber_male
ENSORLG00000007627	kars	93	71.505	ENSHGLG00100012523	-	90	78.079	Heterocephalus_glaber_male
ENSORLG00000007627	kars	93	90.975	ENSHCOG00000002900	kars	95	89.929	Hippocampus_comes
ENSORLG00000007627	kars	99	85.691	ENSIPUG00000009862	kars	98	88.693	Ictalurus_punctatus
ENSORLG00000007627	kars	99	77.467	ENSSTOG00000004205	KARS	95	81.272	Ictidomys_tridecemlineatus
ENSORLG00000007627	kars	99	76.885	ENSJJAG00000020406	Kars	96	81.095	Jaculus_jaculus
ENSORLG00000007627	kars	99	88.670	ENSKMAG00000006434	kars	98	90.123	Kryptolebias_marmoratus
ENSORLG00000007627	kars	99	88.487	ENSLBEG00000026537	kars	99	88.487	Labrus_bergylta
ENSORLG00000007627	kars	83	75.740	ENSLACG00000016399	-	99	75.740	Latimeria_chalumnae
ENSORLG00000007627	kars	98	80.402	ENSLACG00000006667	KARS	97	80.402	Latimeria_chalumnae
ENSORLG00000007627	kars	88	69.815	ENSLOCG00000013608	-	98	69.815	Lepisosteus_oculatus
ENSORLG00000007627	kars	94	88.151	ENSLOCG00000004002	kars	97	88.516	Lepisosteus_oculatus
ENSORLG00000007627	kars	98	76.529	ENSLAFG00000015340	KARS	97	76.529	Loxodonta_africana
ENSORLG00000007627	kars	98	76.364	ENSMFAG00000040024	KARS	95	79.718	Macaca_fascicularis
ENSORLG00000007627	kars	85	76.893	ENSMNEG00000035832	-	99	76.893	Macaca_nemestrina
ENSORLG00000007627	kars	98	76.033	ENSMNEG00000042879	-	95	79.718	Macaca_nemestrina
ENSORLG00000007627	kars	98	76.364	ENSMLEG00000034947	KARS	95	79.718	Mandrillus_leucophaeus
ENSORLG00000007627	kars	99	89.967	ENSMAMG00000021559	kars	99	89.967	Mastacembelus_armatus
ENSORLG00000007627	kars	99	90.625	ENSMZEG00005014382	kars	99	90.625	Maylandia_zebra
ENSORLG00000007627	kars	97	77.547	ENSMGAG00000009000	KARS	98	80.839	Meleagris_gallopavo
ENSORLG00000007627	kars	99	78.303	ENSMICG00000011997	KARS	96	81.565	Microcebus_murinus
ENSORLG00000007627	kars	93	78.456	ENSMOCG00000019029	-	94	78.456	Microtus_ochrogaster
ENSORLG00000007627	kars	99	77.924	ENSMOCG00000011829	Kars	95	81.770	Microtus_ochrogaster
ENSORLG00000007627	kars	92	90.018	ENSMMOG00000016934	kars	99	90.018	Mola_mola
ENSORLG00000007627	kars	91	75.045	ENSMODG00000002238	-	89	76.697	Monodelphis_domestica
ENSORLG00000007627	kars	91	80.000	ENSMODG00000002215	-	97	79.537	Monodelphis_domestica
ENSORLG00000007627	kars	99	87.993	ENSMALG00000020858	kars	100	88.567	Monopterus_albus
ENSORLG00000007627	kars	82	82.899	MGP_CAROLIEiJ_G0031588	Kars	97	81.793	Mus_caroli
ENSORLG00000007627	kars	99	78.303	ENSMUSG00000031948	Kars	96	81.611	Mus_musculus
ENSORLG00000007627	kars	93	81.149	MGP_PahariEiJ_G0023186	Kars	96	80.911	Mus_pahari
ENSORLG00000007627	kars	99	78.140	MGP_SPRETEiJ_G0032706	Kars	96	81.436	Mus_spretus
ENSORLG00000007627	kars	99	76.873	ENSMPUG00000009871	KARS	98	76.873	Mustela_putorius_furo
ENSORLG00000007627	kars	99	77.451	ENSMLUG00000015119	-	96	80.314	Myotis_lucifugus
ENSORLG00000007627	kars	76	53.067	ENSMLUG00000026871	-	76	53.067	Myotis_lucifugus
ENSORLG00000007627	kars	93	80.935	ENSNGAG00000018820	-	95	81.062	Nannospalax_galili
ENSORLG00000007627	kars	95	78.185	ENSNGAG00000022944	-	98	78.185	Nannospalax_galili
ENSORLG00000007627	kars	95	92.376	ENSNBRG00000011098	kars	96	92.376	Neolamprologus_brichardi
ENSORLG00000007627	kars	98	77.355	ENSNLEG00000013072	KARS	95	80.952	Nomascus_leucogenys
ENSORLG00000007627	kars	98	73.378	ENSMEUG00000008684	KARS	97	73.378	Notamacropus_eugenii
ENSORLG00000007627	kars	95	78.876	ENSOPRG00000012544	KARS	95	78.876	Ochotona_princeps
ENSORLG00000007627	kars	99	77.924	ENSODEG00000013099	-	97	81.495	Octodon_degus
ENSORLG00000007627	kars	92	57.194	ENSODEG00000009464	-	94	56.722	Octodon_degus
ENSORLG00000007627	kars	94	92.819	ENSONIG00000005937	kars	97	92.226	Oreochromis_niloticus
ENSORLG00000007627	kars	91	81.701	ENSOANG00000008179	KARS	91	81.331	Ornithorhynchus_anatinus
ENSORLG00000007627	kars	93	75.090	ENSOCUG00000015553	KARS	97	74.177	Oryctolagus_cuniculus
ENSORLG00000007627	kars	100	99.182	ENSORLG00020010056	kars	100	99.182	Oryzias_latipes_hni
ENSORLG00000007627	kars	100	99.158	ENSORLG00015008179	kars	100	99.158	Oryzias_latipes_hsok
ENSORLG00000007627	kars	100	97.218	ENSOMEG00000001710	kars	100	97.218	Oryzias_melastigma
ENSORLG00000007627	kars	99	72.476	ENSOGAG00000005903	KARS	98	72.476	Otolemur_garnettii
ENSORLG00000007627	kars	90	79.745	ENSOARG00000006928	KARS	96	79.745	Ovis_aries
ENSORLG00000007627	kars	98	77.265	ENSPPAG00000036192	KARS	95	80.952	Pan_paniscus
ENSORLG00000007627	kars	99	76.974	ENSPPRG00000003027	KARS	95	80.177	Panthera_pardus
ENSORLG00000007627	kars	99	76.809	ENSPTIG00000008011	KARS	95	80.000	Panthera_tigris_altaica
ENSORLG00000007627	kars	98	77.521	ENSPTRG00000008364	KARS	95	81.129	Pan_troglodytes
ENSORLG00000007627	kars	98	76.529	ENSPANG00000024106	KARS	96	76.529	Papio_anubis
ENSORLG00000007627	kars	99	84.539	ENSPKIG00000009896	kars	98	87.456	Paramormyrops_kingsleyae
ENSORLG00000007627	kars	85	73.988	ENSPSIG00000003041	-	95	73.988	Pelodiscus_sinensis
ENSORLG00000007627	kars	91	81.919	ENSPSIG00000009294	KARS	96	81.607	Pelodiscus_sinensis
ENSORLG00000007627	kars	92	90.893	ENSPMGG00000006117	kars	99	90.893	Periophthalmus_magnuspinnatus
ENSORLG00000007627	kars	99	76.613	ENSPEMG00000012277	Kars	96	80.769	Peromyscus_maniculatus_bairdii
ENSORLG00000007627	kars	98	72.351	ENSPMAG00000008360	-	96	72.351	Petromyzon_marinus
ENSORLG00000007627	kars	95	79.010	ENSPCIG00000010761	-	98	79.010	Phascolarctos_cinereus
ENSORLG00000007627	kars	98	72.959	ENSPCIG00000025469	-	97	72.727	Phascolarctos_cinereus
ENSORLG00000007627	kars	99	87.954	ENSPFOG00000013253	kars	99	87.954	Poecilia_formosa
ENSORLG00000007627	kars	99	88.284	ENSPLAG00000004189	kars	98	90.071	Poecilia_latipinna
ENSORLG00000007627	kars	99	88.119	ENSPMEG00000015698	kars	98	89.894	Poecilia_mexicana
ENSORLG00000007627	kars	99	87.377	ENSPREG00000023179	kars	100	87.377	Poecilia_reticulata
ENSORLG00000007627	kars	98	77.025	ENSPPYG00000007567	KARS	96	77.025	Pongo_abelii
ENSORLG00000007627	kars	83	76.634	ENSPCAG00000010790	KARS	97	76.634	Procavia_capensis
ENSORLG00000007627	kars	99	70.936	ENSPCOG00000003166	KARS	85	85.808	Propithecus_coquereli
ENSORLG00000007627	kars	98	77.980	ENSPVAG00000006746	KARS	96	77.980	Pteropus_vampyrus
ENSORLG00000007627	kars	99	90.625	ENSPNYG00000013095	kars	99	90.625	Pundamilia_nyererei
ENSORLG00000007627	kars	99	84.868	ENSPNAG00000013828	kars	98	88.339	Pygocentrus_nattereri
ENSORLG00000007627	kars	99	76.823	ENSRNOG00000019456	Kars	98	76.911	Rattus_norvegicus
ENSORLG00000007627	kars	98	76.364	ENSRBIG00000030118	KARS	95	80.536	Rhinopithecus_bieti
ENSORLG00000007627	kars	98	76.364	ENSRROG00000041418	KARS	95	80.536	Rhinopithecus_roxellana
ENSORLG00000007627	kars	91	55.877	YDR037W	KRS1	93	56.206	Saccharomyces_cerevisiae
ENSORLG00000007627	kars	75	33.193	YNL073W	-	82	33.680	Saccharomyces_cerevisiae
ENSORLG00000007627	kars	98	77.521	ENSSBOG00000019255	KARS	95	81.129	Saimiri_boliviensis_boliviensis
ENSORLG00000007627	kars	87	69.942	ENSSHAG00000009005	-	96	70.169	Sarcophilus_harrisii
ENSORLG00000007627	kars	91	75.044	ENSSHAG00000001359	-	90	76.806	Sarcophilus_harrisii
ENSORLG00000007627	kars	98	63.455	ENSSHAG00000002050	-	96	62.255	Sarcophilus_harrisii
ENSORLG00000007627	kars	91	88.489	ENSSFOG00015014837	kars	97	88.683	Scleropages_formosus
ENSORLG00000007627	kars	99	88.980	ENSSMAG00000021441	kars	98	90.459	Scophthalmus_maximus
ENSORLG00000007627	kars	99	90.296	ENSSDUG00000001202	kars	98	91.873	Seriola_dumerili
ENSORLG00000007627	kars	92	91.993	ENSSLDG00000021220	kars	97	91.993	Seriola_lalandi_dorsalis
ENSORLG00000007627	kars	71	91.346	ENSSARG00000011493	KARS	70	91.346	Sorex_araneus
ENSORLG00000007627	kars	92	81.362	ENSSPUG00000004974	KARS	96	80.836	Sphenodon_punctatus
ENSORLG00000007627	kars	64	64.042	ENSSPUG00000000449	-	85	65.676	Sphenodon_punctatus
ENSORLG00000007627	kars	99	88.816	ENSSPAG00000020365	kars	97	90.909	Stegastes_partitus
ENSORLG00000007627	kars	98	77.851	ENSSSCG00000002704	KARS	95	81.305	Sus_scrofa
ENSORLG00000007627	kars	91	80.705	ENSTGUG00000008400	KARS	99	80.287	Taeniopygia_guttata
ENSORLG00000007627	kars	99	83.059	ENSTRUG00000017551	kars	99	82.072	Takifugu_rubripes
ENSORLG00000007627	kars	92	86.121	ENSTNIG00000009351	kars	96	84.875	Tetraodon_nigroviridis
ENSORLG00000007627	kars	92	63.316	ENSTBEG00000004610	KARS	79	72.052	Tupaia_belangeri
ENSORLG00000007627	kars	98	77.355	ENSTTRG00000001221	KARS	96	77.355	Tursiops_truncatus
ENSORLG00000007627	kars	99	76.645	ENSUAMG00000017557	KARS	95	79.825	Ursus_americanus
ENSORLG00000007627	kars	99	76.645	ENSUMAG00000014559	KARS	97	76.645	Ursus_maritimus
ENSORLG00000007627	kars	98	76.198	ENSVPAG00000003716	KARS	96	75.947	Vicugna_pacos
ENSORLG00000007627	kars	99	76.835	ENSVVUG00000024338	KARS	96	81.041	Vulpes_vulpes
ENSORLG00000007627	kars	99	76.721	ENSXETG00000003569	kars	99	76.721	Xenopus_tropicalis
ENSORLG00000007627	kars	92	90.000	ENSXCOG00000011313	kars	96	90.892	Xiphophorus_couchianus
ENSORLG00000007627	kars	99	87.705	ENSXMAG00000003191	kars	100	87.705	Xiphophorus_maculatus