EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSORLG00000007654 (Gene tree)
Gene ID
101156237
Gene Symbol
rpl13
Alias
-
Full Name
ribosomal protein L13
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Plus strand
Length
6847 bases
Position
chr3:20443681-20450527
Accession
101156237
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000039322Ribosomal_L13ePF01294.183.8e-8411
ENSORLP00000009590Ribosomal_L13ePF01294.186.8e-8411
ENSORLP00000026909Ribosomal_L13ePF01294.184.5e-7912
ENSORLP00000026909Ribosomal_L13ePF01294.184.5e-7922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000033707-2434XM_004066989ENSORLP00000039322211 (aa)XP_004067037UPI0000E9D599
ENSORLT00000040339-2608-ENSORLP00000026909269 (aa)--
ENSORLT00000009591-813-ENSORLP00000009590270 (aa)-H2LU17
Gene Model
Click here to download ENSORLG00000007654's gene model file
Pathways
Pathway IDPathway NameSource
ola03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007654's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000007654rpl1310088.152ENSG00000167526RPL1310088.889Homo_sapiens
ENSORLG00000007654rpl1310096.209ENSAPOG00000010933rpl1310096.209Acanthochromis_polyacanthus
ENSORLG00000007654rpl1310077.725ENSAMEG00000001111RPL139195.918Ailuropoda_melanoleuca
ENSORLG00000007654rpl1310095.735ENSACIG00000000422rpl1310095.735Amphilophus_citrinellus
ENSORLG00000007654rpl1310096.209ENSAOCG00000014635rpl1310096.209Amphiprion_ocellaris
ENSORLG00000007654rpl1310095.735ENSAPEG00000011271rpl1310095.735Amphiprion_percula
ENSORLG00000007654rpl1310096.682ENSATEG00000004902rpl1310096.682Anabas_testudineus
ENSORLG00000007654rpl1310089.100ENSACAG00000017072RPL1310089.100Anolis_carolinensis
ENSORLG00000007654rpl1310088.626ENSANAG00000030539RPL1310088.626Aotus_nancymaae
ENSORLG00000007654rpl1310096.209ENSACLG00000001642rpl1310097.561Astatotilapia_calliptera
ENSORLG00000007654rpl1310089.573ENSAMXG00000006495rpl1310089.573Astyanax_mexicanus
ENSORLG00000007654rpl1310080.569ENSBTAG00000033143-10080.569Bos_taurus
ENSORLG00000007654rpl1310089.100ENSBTAG00000012044RPL137784.889Bos_taurus
ENSORLG00000007654rpl139858.738WBGene00004425rpl-139964.634Caenorhabditis_elegans
ENSORLG00000007654rpl1310088.626ENSCJAG00000009672-10088.626Callithrix_jacchus
ENSORLG00000007654rpl139988.095ENSCJAG00000016268-10088.152Callithrix_jacchus
ENSORLG00000007654rpl138756.284ENSCAFG00000002388-10058.537Canis_familiaris
ENSORLG00000007654rpl1310089.100ENSCAFG00000019840RPL1310089.100Canis_familiaris
ENSORLG00000007654rpl139565.174ENSCAFG00020024795-9265.174Canis_lupus_dingo
ENSORLG00000007654rpl1310089.100ENSCAFG00020005125RPL1310089.100Canis_lupus_dingo
ENSORLG00000007654rpl1310089.100ENSCHIG00000001441-10089.100Capra_hircus
ENSORLG00000007654rpl1310072.986ENSCHIG00000026795-9969.643Capra_hircus
ENSORLG00000007654rpl139583.085ENSCHIG00000017227-9377.477Capra_hircus
ENSORLG00000007654rpl1310088.152ENSTSYG00000027423RPL1310088.152Carlito_syrichta
ENSORLG00000007654rpl1310089.100ENSCPOG00000027348RPL1310089.100Cavia_porcellus
ENSORLG00000007654rpl1310088.626ENSCCAG00000024248RPL1310088.626Cebus_capucinus
ENSORLG00000007654rpl1310089.100ENSCATG00000042426RPL1310089.100Cercocebus_atys
ENSORLG00000007654rpl139966.190ENSCATG00000038806-9965.581Cercocebus_atys
ENSORLG00000007654rpl1310089.100ENSCLAG00000003801RPL1310089.100Chinchilla_lanigera
ENSORLG00000007654rpl1310088.626ENSCSAG00000000476-10088.626Chlorocebus_sabaeus
ENSORLG00000007654rpl1310089.573ENSCPBG00000013618RPL1310089.573Chrysemys_picta_bellii
ENSORLG00000007654rpl139768.137ENSCING00000002582-9268.137Ciona_intestinalis
ENSORLG00000007654rpl139763.725ENSCSAVG00000007075-9867.143Ciona_savignyi
ENSORLG00000007654rpl136788.732ENSCANG00000028258RPL137788.732Colobus_angolensis_palliatus
ENSORLG00000007654rpl1310072.038ENSCGRG00001023328-10072.038Cricetulus_griseus_chok1gshd
ENSORLG00000007654rpl139367.005ENSCGRG00001008381-10067.005Cricetulus_griseus_chok1gshd
ENSORLG00000007654rpl1310088.626ENSCGRG00001022563Rpl1310088.626Cricetulus_griseus_chok1gshd
ENSORLG00000007654rpl138568.889ENSCGRG00000016503-10068.889Cricetulus_griseus_crigri
ENSORLG00000007654rpl1310088.152ENSCGRG00000014556Rpl1310088.152Cricetulus_griseus_crigri
ENSORLG00000007654rpl1310096.682ENSCSEG00000008346rpl1310096.682Cynoglossus_semilaevis
ENSORLG00000007654rpl1310096.682ENSCVAG00000019742rpl1310096.682Cyprinodon_variegatus
ENSORLG00000007654rpl1310091.469ENSDARG00000099380rpl1310091.469Danio_rerio
ENSORLG00000007654rpl1310088.626ENSDNOG00000034247RPL1310088.626Dasypus_novemcinctus
ENSORLG00000007654rpl138187.059ENSDORG00000028330Rpl1310087.059Dipodomys_ordii
ENSORLG00000007654rpl139564.851FBgn0011272RpL139364.851Drosophila_melanogaster
ENSORLG00000007654rpl139874.762ENSETEG00000015057-9874.762Echinops_telfairi
ENSORLG00000007654rpl138959.574ENSETEG00000004518-9959.574Echinops_telfairi
ENSORLG00000007654rpl1310069.194ENSEBUG00000000730rpl139969.194Eptatretus_burgeri
ENSORLG00000007654rpl136685.714ENSEEUG00000011190-10087.952Erinaceus_europaeus
ENSORLG00000007654rpl139956.667ENSEEUG00000006113-9956.190Erinaceus_europaeus
ENSORLG00000007654rpl1310090.047ENSELUG00000014509rpl1310090.047Esox_lucius
ENSORLG00000007654rpl1310087.204ENSFCAG00000003338RPL1310087.204Felis_catus
ENSORLG00000007654rpl138759.677ENSFCAG00000029961-9356.150Felis_catus
ENSORLG00000007654rpl1310088.626ENSFALG00000003173RPL1310089.157Ficedula_albicollis
ENSORLG00000007654rpl1310089.100ENSFDAG00000011310RPL1310089.100Fukomys_damarensis
ENSORLG00000007654rpl1310097.156ENSFHEG00000006122rpl1310097.156Fundulus_heteroclitus
ENSORLG00000007654rpl1310087.678ENSGMOG00000002752rpl1310086.256Gadus_morhua
ENSORLG00000007654rpl1310089.100ENSGALG00000006179RPL1310089.157Gallus_gallus
ENSORLG00000007654rpl1310088.152ENSGAFG00000017260rpl1310088.152Gambusia_affinis
ENSORLG00000007654rpl1310091.943ENSGACG00000015752rpl1310091.943Gasterosteus_aculeatus
ENSORLG00000007654rpl1310090.047ENSGAGG00000003371RPL1310090.047Gopherus_agassizii
ENSORLG00000007654rpl1310072.038ENSGGOG00000026762-10072.038Gorilla_gorilla
ENSORLG00000007654rpl138388.068ENSGGOG00000025427RPL139887.791Gorilla_gorilla
ENSORLG00000007654rpl1310095.735ENSHBUG00000013579rpl1310096.341Haplochromis_burtoni
ENSORLG00000007654rpl1310089.573ENSHGLG00000010880RPL1310089.573Heterocephalus_glaber_female
ENSORLG00000007654rpl1310089.573ENSHGLG00100018449RPL1310089.573Heterocephalus_glaber_male
ENSORLG00000007654rpl1310094.313ENSHCOG00000002997rpl1310094.313Hippocampus_comes
ENSORLG00000007654rpl1310088.152ENSIPUG00000009775rpl1310088.152Ictalurus_punctatus
ENSORLG00000007654rpl1310086.730ENSSTOG00000011963RPL1310085.308Ictidomys_tridecemlineatus
ENSORLG00000007654rpl1310074.882ENSJJAG00000000236-10074.882Jaculus_jaculus
ENSORLG00000007654rpl1310089.100ENSJJAG00000014012Rpl1310089.100Jaculus_jaculus
ENSORLG00000007654rpl1310095.261ENSKMAG00000006540rpl1310095.261Kryptolebias_marmoratus
ENSORLG00000007654rpl1310094.313ENSLBEG00000026455rpl1310094.313Labrus_bergylta
ENSORLG00000007654rpl139167.005ENSLACG00000002299-9466.497Latimeria_chalumnae
ENSORLG00000007654rpl138467.416ENSLACG00000004644-9767.630Latimeria_chalumnae
ENSORLG00000007654rpl139165.285ENSLACG00000000752-9068.966Latimeria_chalumnae
ENSORLG00000007654rpl135682.353ENSLACG00000005311-10082.353Latimeria_chalumnae
ENSORLG00000007654rpl1310090.047ENSLACG00000013768rpl1310090.047Latimeria_chalumnae
ENSORLG00000007654rpl136069.048ENSLACG00000001306-9168.595Latimeria_chalumnae
ENSORLG00000007654rpl136183.594ENSLACG00000014843-9683.077Latimeria_chalumnae
ENSORLG00000007654rpl1310092.417ENSLOCG00000004063rpl1310092.417Lepisosteus_oculatus
ENSORLG00000007654rpl1310088.152ENSLAFG00000004054RPL1310088.152Loxodonta_africana
ENSORLG00000007654rpl1310065.403ENSMFAG00000046109-9964.186Macaca_fascicularis
ENSORLG00000007654rpl1310088.626ENSMFAG00000027717-10088.626Macaca_fascicularis
ENSORLG00000007654rpl1310088.626ENSMMUG00000017928RPL1310088.626Macaca_mulatta
ENSORLG00000007654rpl139964.286ENSMMUG00000038060-9963.721Macaca_mulatta
ENSORLG00000007654rpl139361.692ENSMNEG00000033097-8666.667Macaca_nemestrina
ENSORLG00000007654rpl139965.714ENSMNEG00000030483-9965.116Macaca_nemestrina
ENSORLG00000007654rpl1310068.720ENSMLEG00000036728-10086.747Mandrillus_leucophaeus
ENSORLG00000007654rpl139967.619ENSMLEG00000033776-9966.977Mandrillus_leucophaeus
ENSORLG00000007654rpl1310096.682ENSMAMG00000021552rpl1310096.682Mastacembelus_armatus
ENSORLG00000007654rpl1310096.209ENSMZEG00005014343rpl1310097.561Maylandia_zebra
ENSORLG00000007654rpl138488.701ENSMGAG00000008027RPL139788.372Meleagris_gallopavo
ENSORLG00000007654rpl137587.421ENSMAUG00000020543-10087.421Mesocricetus_auratus
ENSORLG00000007654rpl1310083.886ENSMAUG00000016802-10083.886Mesocricetus_auratus
ENSORLG00000007654rpl137283.660ENSMICG00000027620-8886.747Microcebus_murinus
ENSORLG00000007654rpl1310088.152ENSMICG00000043954-10088.152Microcebus_murinus
ENSORLG00000007654rpl1310077.725ENSMOCG00000016985-10077.251Microtus_ochrogaster
ENSORLG00000007654rpl1310078.673ENSMOCG00000021875-10078.169Microtus_ochrogaster
ENSORLG00000007654rpl1310072.038ENSMOCG00000011602-10072.038Microtus_ochrogaster
ENSORLG00000007654rpl1310087.678ENSMOCG00000002216-10087.678Microtus_ochrogaster
ENSORLG00000007654rpl1310089.100ENSMOCG00000009058-10089.100Microtus_ochrogaster
ENSORLG00000007654rpl1310096.209ENSMMOG00000016577rpl1310096.209Mola_mola
ENSORLG00000007654rpl1310089.573ENSMODG00000003663RPL1310089.573Monodelphis_domestica
ENSORLG00000007654rpl1310094.787ENSMALG00000020934rpl1310094.787Monopterus_albus
ENSORLG00000007654rpl1310088.626MGP_CAROLIEiJ_G0031676Rpl1310088.626Mus_caroli
ENSORLG00000007654rpl1310088.626ENSMUSG00000000740Rpl1310088.626Mus_musculus
ENSORLG00000007654rpl136477.612MGP_PahariEiJ_G0022842-8186.207Mus_pahari
ENSORLG00000007654rpl1310088.626MGP_PahariEiJ_G0023274Rpl1310088.626Mus_pahari
ENSORLG00000007654rpl1310089.100MGP_SPRETEiJ_G0032794Rpl1310089.100Mus_spretus
ENSORLG00000007654rpl139483.920MGP_SPRETEiJ_G0031839-7883.920Mus_spretus
ENSORLG00000007654rpl139950.718ENSMPUG00000001481-9748.571Mustela_putorius_furo
ENSORLG00000007654rpl1310089.100ENSMLUG00000010950RPL139985.268Myotis_lucifugus
ENSORLG00000007654rpl138462.360ENSNGAG00000012072-10060.284Nannospalax_galili
ENSORLG00000007654rpl1310088.152ENSNGAG00000018467Rpl1310088.152Nannospalax_galili
ENSORLG00000007654rpl138768.306ENSNGAG00000014655-9373.043Nannospalax_galili
ENSORLG00000007654rpl1310095.735ENSNBRG00000011031rpl1310097.561Neolamprologus_brichardi
ENSORLG00000007654rpl1310071.226ENSNLEG00000028759-10071.698Nomascus_leucogenys
ENSORLG00000007654rpl1310088.626ENSNLEG00000015774RPL1310088.626Nomascus_leucogenys
ENSORLG00000007654rpl1310083.412ENSODEG00000019351-10083.412Octodon_degus
ENSORLG00000007654rpl1310086.256ENSODEG00000020384-10086.256Octodon_degus
ENSORLG00000007654rpl1310085.308ENSODEG00000019915-10085.308Octodon_degus
ENSORLG00000007654rpl1310088.152ENSODEG00000019458-10088.152Octodon_degus
ENSORLG00000007654rpl1310086.730ENSODEG00000019297-10086.730Octodon_degus
ENSORLG00000007654rpl1310088.152ENSODEG00000004235-10088.152Octodon_degus
ENSORLG00000007654rpl1310095.735ENSONIG00000005934rpl1310097.561Oreochromis_niloticus
ENSORLG00000007654rpl1310088.626ENSOANG00000006729RPL1310088.626Ornithorhynchus_anatinus
ENSORLG00000007654rpl1310083.412ENSOCUG00000022399-10083.886Oryctolagus_cuniculus
ENSORLG00000007654rpl1310084.360ENSOCUG00000024415-10084.834Oryctolagus_cuniculus
ENSORLG00000007654rpl1310081.517ENSOCUG00000007536-10081.043Oryctolagus_cuniculus
ENSORLG00000007654rpl1310099.052ENSORLG00020009960rpl13100100.000Oryzias_latipes_hni
ENSORLG00000007654rpl1310099.052ENSORLG00015008108rpl13100100.000Oryzias_latipes_hsok
ENSORLG00000007654rpl1310098.578ENSOMEG00000001728rpl1310098.578Oryzias_melastigma
ENSORLG00000007654rpl1310089.100ENSOGAG00000026444RPL1310089.100Otolemur_garnettii
ENSORLG00000007654rpl1310081.991ENSOARG00000003957-7181.991Ovis_aries
ENSORLG00000007654rpl138388.000ENSPPAG00000029415-9887.719Pan_paniscus
ENSORLG00000007654rpl139983.333ENSPPAG00000042590-9882.326Pan_paniscus
ENSORLG00000007654rpl1310071.090ENSPPAG00000041631-10071.090Pan_paniscus
ENSORLG00000007654rpl1310087.204ENSPPRG00000003949RPL1310087.204Panthera_pardus
ENSORLG00000007654rpl138460.335ENSPPRG00000006057-8656.667Panthera_pardus
ENSORLG00000007654rpl136285.385ENSPTIG00000010985RPL138983.704Panthera_tigris_altaica
ENSORLG00000007654rpl138460.335ENSPTIG00000014719-8656.667Panthera_tigris_altaica
ENSORLG00000007654rpl1310088.626ENSPTRG00000008480RPL1310088.626Pan_troglodytes
ENSORLG00000007654rpl1310083.412ENSPTRG00000041770-10083.412Pan_troglodytes
ENSORLG00000007654rpl1310070.616ENSPTRG00000047911-10070.616Pan_troglodytes
ENSORLG00000007654rpl1310089.100ENSPANG00000031667RPL1310089.100Papio_anubis
ENSORLG00000007654rpl1310092.891ENSPKIG00000001789rpl1310092.891Paramormyrops_kingsleyae
ENSORLG00000007654rpl1310090.521ENSPSIG00000015634RPL1310090.521Pelodiscus_sinensis
ENSORLG00000007654rpl1310095.261ENSPMGG00000006067rpl1310095.261Periophthalmus_magnuspinnatus
ENSORLG00000007654rpl1310088.626ENSPEMG00000010342Rpl1310088.626Peromyscus_maniculatus_bairdii
ENSORLG00000007654rpl1310097.156ENSPFOG00000013435rpl1310097.156Poecilia_formosa
ENSORLG00000007654rpl1310097.156ENSPLAG00000004085rpl1310097.156Poecilia_latipinna
ENSORLG00000007654rpl1310097.156ENSPMEG00000015599rpl1310097.156Poecilia_mexicana
ENSORLG00000007654rpl1310096.682ENSPREG00000023190rpl1310096.682Poecilia_reticulata
ENSORLG00000007654rpl1310087.678ENSPCAG00000015461RPL1310087.678Procavia_capensis
ENSORLG00000007654rpl1310089.100ENSPCOG00000024647RPL1310089.100Propithecus_coquereli
ENSORLG00000007654rpl1310086.256ENSPVAG00000015130RPL1310086.256Pteropus_vampyrus
ENSORLG00000007654rpl1310095.735ENSPNYG00000013189rpl1310096.341Pundamilia_nyererei
ENSORLG00000007654rpl1310091.943ENSPNAG00000002916rpl1310091.943Pygocentrus_nattereri
ENSORLG00000007654rpl1310087.678ENSRNOG00000055911LOC10036125910087.678Rattus_norvegicus
ENSORLG00000007654rpl1310088.626ENSRNOG00000015335Rpl1310088.626Rattus_norvegicus
ENSORLG00000007654rpl1310087.204ENSRNOG00000061438LOC10036049110087.204Rattus_norvegicus
ENSORLG00000007654rpl1310083.412ENSRNOG00000029227AABR07054469.110083.412Rattus_norvegicus
ENSORLG00000007654rpl139982.857ENSRNOG00000059545AC114446.110080.660Rattus_norvegicus
ENSORLG00000007654rpl1310089.100ENSRBIG00000031937RPL1310089.100Rhinopithecus_bieti
ENSORLG00000007654rpl139967.619ENSRBIG00000010434-8967.619Rhinopithecus_bieti
ENSORLG00000007654rpl139967.619ENSRROG00000025626-8967.619Rhinopithecus_roxellana
ENSORLG00000007654rpl1310089.100ENSRROG00000036999-10089.100Rhinopithecus_roxellana
ENSORLG00000007654rpl139248.454YDL082WRPL13A10049.763Saccharomyces_cerevisiae
ENSORLG00000007654rpl139248.969YMR142CRPL13B10050.237Saccharomyces_cerevisiae
ENSORLG00000007654rpl1310088.626ENSSBOG00000028589-10088.626Saimiri_boliviensis_boliviensis
ENSORLG00000007654rpl1310068.720ENSSBOG00000019618-10068.720Saimiri_boliviensis_boliviensis
ENSORLG00000007654rpl138156.725ENSSHAG00000010433-9967.778Sarcophilus_harrisii
ENSORLG00000007654rpl1310093.365ENSSFOG00015019594rpl1310093.365Scleropages_formosus
ENSORLG00000007654rpl1310093.839ENSSMAG00000021443rpl1310093.839Scophthalmus_maximus
ENSORLG00000007654rpl1310096.209ENSSDUG00000001262rpl1310096.209Seriola_dumerili
ENSORLG00000007654rpl1310096.209ENSSLDG00000021182rpl1310096.209Seriola_lalandi_dorsalis
ENSORLG00000007654rpl139652.153ENSSLDG00000007067-9452.153Seriola_lalandi_dorsalis
ENSORLG00000007654rpl137688.125ENSSPUG00000006904RPL138988.125Sphenodon_punctatus
ENSORLG00000007654rpl1310096.209ENSSPAG00000020434rpl1310096.209Stegastes_partitus
ENSORLG00000007654rpl1310088.152ENSSSCG00000024974RPL1310088.152Sus_scrofa
ENSORLG00000007654rpl139965.238ENSSSCG00000003723-10064.929Sus_scrofa
ENSORLG00000007654rpl139953.023ENSSSCG00000029020-9653.023Sus_scrofa
ENSORLG00000007654rpl1310063.507ENSSSCG00000036198-10063.855Sus_scrofa
ENSORLG00000007654rpl139962.019ENSSSCG00000007813-9962.019Sus_scrofa
ENSORLG00000007654rpl139959.330ENSSSCG00000033294-9959.420Sus_scrofa
ENSORLG00000007654rpl1310086.730ENSTGUG00000007874RPL1310086.730Taeniopygia_guttata
ENSORLG00000007654rpl1310093.839ENSTRUG00000021170rpl1310093.839Takifugu_rubripes
ENSORLG00000007654rpl1310095.261ENSTNIG00000009349rpl1310095.261Tetraodon_nigroviridis
ENSORLG00000007654rpl1310089.100ENSTTRG00000004374RPL1310089.100Tursiops_truncatus
ENSORLG00000007654rpl1310088.626ENSUAMG00000020363RPL1310088.626Ursus_americanus
ENSORLG00000007654rpl136080.952ENSVPAG00000000569-10080.952Vicugna_pacos
ENSORLG00000007654rpl139453.171ENSVVUG00000005779-9250.952Vulpes_vulpes
ENSORLG00000007654rpl1310081.517ENSVVUG00000003839-10081.517Vulpes_vulpes
ENSORLG00000007654rpl1310085.782ENSXETG00000019835rpl1310085.782Xenopus_tropicalis
ENSORLG00000007654rpl1310096.682ENSXCOG00000011315rpl1310096.682Xiphophorus_couchianus
ENSORLG00000007654rpl1310097.156ENSXMAG00000003221rpl1310097.156Xiphophorus_maculatus

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