EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000007695 (Gene tree)
Gene ID: 101163071
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4609 bases
Position: chr4:12901122-12905730
Accession: 101163071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000009640	MMR_HSR1	PF01926.23	1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000009641	-	1827	XM_004067899	ENSORLP00000009640	608 (aa)	XP_004067947	H2LU66

Gene Model

Click here to download ENSORLG00000007695's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007695's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007695	lsg1	99	63.623	ENSG00000041802	LSG1	90	76.398	Homo_sapiens
ENSORLG00000007695	lsg1	100	78.527	ENSAPOG00000009694	lsg1	99	78.720	Acanthochromis_polyacanthus
ENSORLG00000007695	lsg1	100	62.330	ENSAMEG00000009343	LSG1	98	62.346	Ailuropoda_melanoleuca
ENSORLG00000007695	lsg1	98	79.512	ENSACIG00000012406	lsg1	98	79.187	Amphilophus_citrinellus
ENSORLG00000007695	lsg1	100	78.130	ENSAOCG00000016066	lsg1	99	78.560	Amphiprion_ocellaris
ENSORLG00000007695	lsg1	100	79.741	ENSAPEG00000003252	lsg1	99	79.773	Amphiprion_percula
ENSORLG00000007695	lsg1	98	79.968	ENSATEG00000011794	lsg1	98	79.968	Anabas_testudineus
ENSORLG00000007695	lsg1	95	60.897	ENSACAG00000004222	LSG1	100	60.863	Anolis_carolinensis
ENSORLG00000007695	lsg1	99	63.775	ENSANAG00000021153	LSG1	98	63.975	Aotus_nancymaae
ENSORLG00000007695	lsg1	100	78.428	ENSACLG00000000520	lsg1	98	77.987	Astatotilapia_calliptera
ENSORLG00000007695	lsg1	100	69.124	ENSAMXG00000008271	lsg1	98	69.906	Astyanax_mexicanus
ENSORLG00000007695	lsg1	99	65.031	ENSBTAG00000008461	LSG1	98	65.102	Bos_taurus
ENSORLG00000007695	lsg1	83	41.586	WBGene00016907	C53H9.2	82	44.162	Caenorhabditis_elegans
ENSORLG00000007695	lsg1	99	63.927	ENSCJAG00000013962	LSG1	98	63.975	Callithrix_jacchus
ENSORLG00000007695	lsg1	95	63.968	ENSCAFG00000013445	LSG1	100	63.738	Canis_familiaris
ENSORLG00000007695	lsg1	100	62.763	ENSCAFG00020002216	LSG1	99	63.666	Canis_lupus_dingo
ENSORLG00000007695	lsg1	100	65.170	ENSCHIG00000015769	LSG1	98	65.245	Capra_hircus
ENSORLG00000007695	lsg1	99	62.766	ENSTSYG00000001447	LSG1	98	62.636	Carlito_syrichta
ENSORLG00000007695	lsg1	94	63.394	ENSCAPG00000009856	LSG1	99	62.914	Cavia_aperea
ENSORLG00000007695	lsg1	99	64.516	ENSCCAG00000035744	LSG1	98	64.577	Cebus_capucinus
ENSORLG00000007695	lsg1	99	64.079	ENSCATG00000042060	LSG1	98	62.733	Cercocebus_atys
ENSORLG00000007695	lsg1	99	63.775	ENSCSAG00000008796	LSG1	90	63.509	Chlorocebus_sabaeus
ENSORLG00000007695	lsg1	100	64.857	ENSCPBG00000015941	LSG1	82	65.385	Chrysemys_picta_bellii
ENSORLG00000007695	lsg1	84	50.097	ENSCING00000007079	-	97	49.802	Ciona_intestinalis
ENSORLG00000007695	lsg1	93	47.199	ENSCSAVG00000002514	-	98	49.900	Ciona_savignyi
ENSORLG00000007695	lsg1	99	63.166	ENSCANG00000030709	LSG1	98	63.509	Colobus_angolensis_palliatus
ENSORLG00000007695	lsg1	99	64.873	ENSCGRG00001019846	Lsg1	98	65.858	Cricetulus_griseus_chok1gshd
ENSORLG00000007695	lsg1	99	63.538	ENSCGRG00000014617	Lsg1	98	64.511	Cricetulus_griseus_crigri
ENSORLG00000007695	lsg1	98	76.603	ENSCSEG00000008522	lsg1	98	76.282	Cynoglossus_semilaevis
ENSORLG00000007695	lsg1	97	80.392	ENSCVAG00000002484	lsg1	98	80.813	Cyprinodon_variegatus
ENSORLG00000007695	lsg1	100	71.163	ENSDARG00000015352	lsg1	98	71.885	Danio_rerio
ENSORLG00000007695	lsg1	99	63.182	ENSDNOG00000006224	LSG1	98	63.932	Dasypus_novemcinctus
ENSORLG00000007695	lsg1	99	50.718	FBgn0266284	Ns3	98	50.651	Drosophila_melanogaster
ENSORLG00000007695	lsg1	87	76.000	ENSETEG00000003888	LSG1	87	80.645	Echinops_telfairi
ENSORLG00000007695	lsg1	88	57.592	ENSEBUG00000003119	lsg1	85	57.592	Eptatretus_burgeri
ENSORLG00000007695	lsg1	99	64.134	ENSEASG00005000678	LSG1	98	64.496	Equus_asinus_asinus
ENSORLG00000007695	lsg1	99	63.830	ENSECAG00000017659	LSG1	98	64.341	Equus_caballus
ENSORLG00000007695	lsg1	87	55.556	ENSEEUG00000015217	LSG1	85	55.556	Erinaceus_europaeus
ENSORLG00000007695	lsg1	100	73.194	ENSELUG00000023973	lsg1	98	73.115	Esox_lucius
ENSORLG00000007695	lsg1	100	63.086	ENSFCAG00000024957	LSG1	98	62.809	Felis_catus
ENSORLG00000007695	lsg1	92	61.712	ENSFALG00000007210	LSG1	94	61.712	Ficedula_albicollis
ENSORLG00000007695	lsg1	99	63.339	ENSFDAG00000017373	LSG1	98	63.593	Fukomys_damarensis
ENSORLG00000007695	lsg1	97	80.682	ENSFHEG00000003680	lsg1	98	80.775	Fundulus_heteroclitus
ENSORLG00000007695	lsg1	98	67.994	ENSGMOG00000015834	lsg1	98	68.058	Gadus_morhua
ENSORLG00000007695	lsg1	99	59.758	ENSGALG00000007058	LSG1	86	60.187	Gallus_gallus
ENSORLG00000007695	lsg1	97	82.616	ENSGAFG00000015831	lsg1	98	82.867	Gambusia_affinis
ENSORLG00000007695	lsg1	98	75.791	ENSGACG00000009323	lsg1	98	76.603	Gasterosteus_aculeatus
ENSORLG00000007695	lsg1	99	63.775	ENSGGOG00000000520	LSG1	98	63.975	Gorilla_gorilla
ENSORLG00000007695	lsg1	100	79.407	ENSHBUG00000005659	lsg1	98	78.981	Haplochromis_burtoni
ENSORLG00000007695	lsg1	99	63.708	ENSHGLG00000017390	LSG1	98	63.916	Heterocephalus_glaber_female
ENSORLG00000007695	lsg1	99	63.708	ENSHGLG00100018587	LSG1	98	63.916	Heterocephalus_glaber_male
ENSORLG00000007695	lsg1	97	76.737	ENSHCOG00000016848	lsg1	98	76.688	Hippocampus_comes
ENSORLG00000007695	lsg1	100	70.892	ENSIPUG00000008631	lsg1	98	71.475	Ictalurus_punctatus
ENSORLG00000007695	lsg1	71	60.460	ENSSTOG00000010234	LSG1	90	60.460	Ictidomys_tridecemlineatus
ENSORLG00000007695	lsg1	99	64.050	ENSJJAG00000015513	Lsg1	98	64.103	Jaculus_jaculus
ENSORLG00000007695	lsg1	98	78.418	ENSKMAG00000009681	lsg1	98	78.418	Kryptolebias_marmoratus
ENSORLG00000007695	lsg1	98	78.441	ENSLBEG00000024261	lsg1	98	79.104	Labrus_bergylta
ENSORLG00000007695	lsg1	100	64.759	ENSLACG00000013399	LSG1	98	64.823	Latimeria_chalumnae
ENSORLG00000007695	lsg1	98	70.755	ENSLOCG00000004918	lsg1	98	70.126	Lepisosteus_oculatus
ENSORLG00000007695	lsg1	99	64.496	ENSLAFG00000012919	-	98	64.873	Loxodonta_africana
ENSORLG00000007695	lsg1	99	63.775	ENSMFAG00000039903	LSG1	98	62.422	Macaca_fascicularis
ENSORLG00000007695	lsg1	99	63.775	ENSMMUG00000010708	LSG1	98	63.509	Macaca_mulatta
ENSORLG00000007695	lsg1	99	63.775	ENSMNEG00000031538	LSG1	98	62.578	Macaca_nemestrina
ENSORLG00000007695	lsg1	99	63.775	ENSMLEG00000041184	LSG1	98	63.509	Mandrillus_leucophaeus
ENSORLG00000007695	lsg1	100	79.133	ENSMAMG00000000470	lsg1	98	79.508	Mastacembelus_armatus
ENSORLG00000007695	lsg1	100	79.563	ENSMZEG00005017865	lsg1	98	79.140	Maylandia_zebra
ENSORLG00000007695	lsg1	88	60.988	ENSMGAG00000007050	LSG1	99	61.329	Meleagris_gallopavo
ENSORLG00000007695	lsg1	90	63.918	ENSMAUG00000016976	Lsg1	90	64.937	Mesocricetus_auratus
ENSORLG00000007695	lsg1	99	63.262	ENSMICG00000049087	LSG1	98	63.863	Microcebus_murinus
ENSORLG00000007695	lsg1	99	64.075	ENSMOCG00000022136	Lsg1	98	65.079	Microtus_ochrogaster
ENSORLG00000007695	lsg1	98	77.076	ENSMMOG00000008884	lsg1	98	76.910	Mola_mola
ENSORLG00000007695	lsg1	99	55.120	ENSMODG00000019828	LSG1	98	55.300	Monodelphis_domestica
ENSORLG00000007695	lsg1	100	64.596	MGP_CAROLIEiJ_G0020648	Lsg1	98	64.659	Mus_caroli
ENSORLG00000007695	lsg1	100	63.721	ENSMUSG00000022538	Lsg1	98	64.873	Mus_musculus
ENSORLG00000007695	lsg1	98	64.050	MGP_PahariEiJ_G0016352	Lsg1	98	64.151	Mus_pahari
ENSORLG00000007695	lsg1	100	64.596	MGP_SPRETEiJ_G0021544	Lsg1	98	64.873	Mus_spretus
ENSORLG00000007695	lsg1	100	63.253	ENSMPUG00000003734	LSG1	98	63.328	Mustela_putorius_furo
ENSORLG00000007695	lsg1	100	64.472	ENSMLUG00000012548	LSG1	98	63.750	Myotis_lucifugus
ENSORLG00000007695	lsg1	99	65.723	ENSNGAG00000021872	Lsg1	98	65.916	Nannospalax_galili
ENSORLG00000007695	lsg1	99	64.384	ENSNLEG00000008293	LSG1	98	63.975	Nomascus_leucogenys
ENSORLG00000007695	lsg1	70	69.072	ENSMEUG00000009041	-	83	69.072	Notamacropus_eugenii
ENSORLG00000007695	lsg1	100	77.864	ENSONIG00000002635	lsg1	98	78.199	Oreochromis_niloticus
ENSORLG00000007695	lsg1	95	66.074	ENSOANG00000012742	LSG1	99	66.016	Ornithorhynchus_anatinus
ENSORLG00000007695	lsg1	99	63.485	ENSOCUG00000004817	LSG1	98	63.215	Oryctolagus_cuniculus
ENSORLG00000007695	lsg1	100	97.240	ENSORLG00020016286	lsg1	100	97.240	Oryzias_latipes_hni
ENSORLG00000007695	lsg1	100	97.368	ENSORLG00015012025	lsg1	100	97.368	Oryzias_latipes_hsok
ENSORLG00000007695	lsg1	98	91.240	ENSOMEG00000022379	lsg1	98	91.240	Oryzias_melastigma
ENSORLG00000007695	lsg1	99	62.632	ENSOGAG00000003475	LSG1	98	62.712	Otolemur_garnettii
ENSORLG00000007695	lsg1	100	64.165	ENSOARG00000020403	LSG1	98	64.219	Ovis_aries
ENSORLG00000007695	lsg1	99	63.623	ENSPPAG00000029271	LSG1	98	63.975	Pan_paniscus
ENSORLG00000007695	lsg1	100	62.425	ENSPPRG00000010281	LSG1	98	62.137	Panthera_pardus
ENSORLG00000007695	lsg1	100	63.238	ENSPTIG00000010789	LSG1	98	62.963	Panthera_tigris_altaica
ENSORLG00000007695	lsg1	99	63.623	ENSPTRG00000015760	LSG1	98	63.820	Pan_troglodytes
ENSORLG00000007695	lsg1	99	63.623	ENSPANG00000018249	LSG1	98	62.267	Papio_anubis
ENSORLG00000007695	lsg1	99	70.886	ENSPKIG00000002895	lsg1	98	72.492	Paramormyrops_kingsleyae
ENSORLG00000007695	lsg1	96	61.514	ENSPSIG00000009821	LSG1	99	60.883	Pelodiscus_sinensis
ENSORLG00000007695	lsg1	95	77.685	ENSPMGG00000000931	lsg1	100	77.517	Periophthalmus_magnuspinnatus
ENSORLG00000007695	lsg1	99	63.636	ENSPEMG00000012082	-	98	63.994	Peromyscus_maniculatus_bairdii
ENSORLG00000007695	lsg1	99	60.538	ENSPMAG00000007451	lsg1	98	60.518	Petromyzon_marinus
ENSORLG00000007695	lsg1	98	65.027	ENSPCIG00000013890	LSG1	78	65.027	Phascolarctos_cinereus
ENSORLG00000007695	lsg1	97	79.133	ENSPFOG00000021882	lsg1	98	79.775	Poecilia_formosa
ENSORLG00000007695	lsg1	97	80.456	ENSPLAG00000019536	lsg1	98	80.551	Poecilia_latipinna
ENSORLG00000007695	lsg1	97	78.880	ENSPMEG00000017281	lsg1	98	79.040	Poecilia_mexicana
ENSORLG00000007695	lsg1	97	69.280	ENSPREG00000006048	lsg1	98	69.427	Poecilia_reticulata
ENSORLG00000007695	lsg1	92	62.975	ENSPPYG00000014425	LSG1	98	63.514	Pongo_abelii
ENSORLG00000007695	lsg1	89	73.333	ENSPCAG00000005511	LSG1	88	79.032	Procavia_capensis
ENSORLG00000007695	lsg1	99	63.957	ENSPCOG00000012360	LSG1	98	63.537	Propithecus_coquereli
ENSORLG00000007695	lsg1	100	78.428	ENSPNYG00000021994	lsg1	98	77.987	Pundamilia_nyererei
ENSORLG00000007695	lsg1	100	71.139	ENSPNAG00000015533	lsg1	98	71.044	Pygocentrus_nattereri
ENSORLG00000007695	lsg1	100	62.614	ENSRNOG00000001727	Lsg1	98	63.707	Rattus_norvegicus
ENSORLG00000007695	lsg1	99	63.415	ENSRBIG00000029053	LSG1	98	63.142	Rhinopithecus_bieti
ENSORLG00000007695	lsg1	99	63.415	ENSRROG00000037702	LSG1	98	63.142	Rhinopithecus_roxellana
ENSORLG00000007695	lsg1	82	40.684	YGL099W	LSG1	71	42.742	Saccharomyces_cerevisiae
ENSORLG00000007695	lsg1	99	63.775	ENSSBOG00000034938	LSG1	98	64.130	Saimiri_boliviensis_boliviensis
ENSORLG00000007695	lsg1	76	60.115	ENSSHAG00000003487	LSG1	100	60.115	Sarcophilus_harrisii
ENSORLG00000007695	lsg1	98	71.611	ENSSFOG00015008955	lsg1	98	71.611	Scleropages_formosus
ENSORLG00000007695	lsg1	98	79.524	ENSSDUG00000004622	lsg1	98	79.683	Seriola_dumerili
ENSORLG00000007695	lsg1	98	81.596	ENSSLDG00000010869	lsg1	98	81.759	Seriola_lalandi_dorsalis
ENSORLG00000007695	lsg1	86	65.487	ENSSARG00000012981	LSG1	78	66.366	Sorex_araneus
ENSORLG00000007695	lsg1	100	64.448	ENSSPUG00000016347	LSG1	98	63.820	Sphenodon_punctatus
ENSORLG00000007695	lsg1	100	78.871	ENSSPAG00000005508	lsg1	99	79.967	Stegastes_partitus
ENSORLG00000007695	lsg1	100	63.932	ENSSSCG00000011827	LSG1	98	64.455	Sus_scrofa
ENSORLG00000007695	lsg1	88	59.667	ENSTGUG00000009068	LSG1	100	59.899	Taeniopygia_guttata
ENSORLG00000007695	lsg1	97	74.959	ENSTRUG00000017380	lsg1	98	74.152	Takifugu_rubripes
ENSORLG00000007695	lsg1	97	76.404	ENSTNIG00000015570	lsg1	98	76.518	Tetraodon_nigroviridis
ENSORLG00000007695	lsg1	100	60.823	ENSTTRG00000000559	LSG1	98	61.275	Tursiops_truncatus
ENSORLG00000007695	lsg1	100	62.671	ENSUAMG00000012454	LSG1	98	62.751	Ursus_americanus
ENSORLG00000007695	lsg1	100	62.671	ENSUMAG00000000855	LSG1	98	62.751	Ursus_maritimus
ENSORLG00000007695	lsg1	95	61.502	ENSVPAG00000012400	LSG1	100	60.800	Vicugna_pacos
ENSORLG00000007695	lsg1	95	64.103	ENSVVUG00000008956	LSG1	97	64.563	Vulpes_vulpes
ENSORLG00000007695	lsg1	100	66.461	ENSXETG00000003451	lsg1	98	66.935	Xenopus_tropicalis
ENSORLG00000007695	lsg1	97	81.240	ENSXCOG00000003239	lsg1	98	80.452	Xiphophorus_couchianus
ENSORLG00000007695	lsg1	97	80.795	ENSXMAG00000005536	lsg1	98	80.656	Xiphophorus_maculatus