EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000007740 (Gene tree)
Gene ID: 101157425
Gene Symbol: gatb
Alias: -
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 17052 bases
Position: chr1:19212824-19229875
Accession: 101157425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000009692	GatB_Yqey	PF02637.18	1.8e-40	1	1
ENSORLP00000009693	GatB_Yqey	PF02637.18	5.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000009694	-	1353	-	ENSORLP00000009693	450 (aa)	-	H2LUB6
ENSORLT00000038430	-	576	-	ENSORLP00000032035	126 (aa)	-	-
ENSORLT00000009693	-	1461	XM_020703871	ENSORLP00000009692	487 (aa)	XP_020559530	H2LUB5

Gene Model

Click here to download ENSORLG00000007740's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00970	Aminoacyl-tRNA biosynthesis	KEGG
ola01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000007740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000007740	gatb	99	65.517	ENSG00000059691	GATB	88	66.053	Homo_sapiens
ENSORLG00000007740	gatb	100	85.051	ENSAPOG00000022676	gatb	90	85.051	Acanthochromis_polyacanthus
ENSORLG00000007740	gatb	99	64.315	ENSAMEG00000018434	GATB	88	64.315	Ailuropoda_melanoleuca
ENSORLG00000007740	gatb	87	82.217	ENSACIG00000015827	gatb	99	82.217	Amphilophus_citrinellus
ENSORLG00000007740	gatb	99	84.584	ENSAOCG00000009635	gatb	94	84.584	Amphiprion_ocellaris
ENSORLG00000007740	gatb	99	80.204	ENSAPEG00000023666	gatb	93	80.204	Amphiprion_percula
ENSORLG00000007740	gatb	100	84.242	ENSATEG00000011821	gatb	90	84.242	Anabas_testudineus
ENSORLG00000007740	gatb	99	68.367	ENSAPLG00000003933	GATB	99	68.367	Anas_platyrhynchos
ENSORLG00000007740	gatb	99	66.667	ENSACAG00000002772	GATB	89	66.667	Anolis_carolinensis
ENSORLG00000007740	gatb	99	65.314	ENSANAG00000020953	GATB	88	65.314	Aotus_nancymaae
ENSORLG00000007740	gatb	91	82.119	ENSACLG00000026091	gatb	91	82.119	Astatotilapia_calliptera
ENSORLG00000007740	gatb	99	67.137	ENSAMXG00000021662	gatb	89	67.137	Astyanax_mexicanus
ENSORLG00000007740	gatb	99	64.837	ENSBTAG00000013914	GATB	88	64.837	Bos_taurus
ENSORLG00000007740	gatb	99	65.517	ENSCJAG00000002147	GATB	88	65.517	Callithrix_jacchus
ENSORLG00000007740	gatb	99	65.440	ENSCAFG00000008088	GATB	88	65.440	Canis_familiaris
ENSORLG00000007740	gatb	99	65.440	ENSCAFG00020026686	GATB	88	65.440	Canis_lupus_dingo
ENSORLG00000007740	gatb	99	64.300	ENSCHIG00000020111	GATB	88	64.300	Capra_hircus
ENSORLG00000007740	gatb	99	66.531	ENSTSYG00000009976	GATB	88	67.076	Carlito_syrichta
ENSORLG00000007740	gatb	93	63.678	ENSCAPG00000010977	GATB	89	63.678	Cavia_aperea
ENSORLG00000007740	gatb	99	65.720	ENSCPOG00000005023	GATB	88	65.720	Cavia_porcellus
ENSORLG00000007740	gatb	82	69.118	ENSCCAG00000021445	GATB	82	69.118	Cebus_capucinus
ENSORLG00000007740	gatb	99	64.909	ENSCATG00000034281	GATB	88	64.909	Cercocebus_atys
ENSORLG00000007740	gatb	99	64.909	ENSCLAG00000005772	GATB	87	68.856	Chinchilla_lanigera
ENSORLG00000007740	gatb	99	64.909	ENSCSAG00000003318	GATB	88	64.909	Chlorocebus_sabaeus
ENSORLG00000007740	gatb	99	64.155	ENSCHOG00000008476	GATB	88	64.155	Choloepus_hoffmanni
ENSORLG00000007740	gatb	99	67.959	ENSCPBG00000025824	GATB	89	67.959	Chrysemys_picta_bellii
ENSORLG00000007740	gatb	99	65.314	ENSCANG00000029227	GATB	88	65.314	Colobus_angolensis_palliatus
ENSORLG00000007740	gatb	99	65.923	ENSCGRG00001024051	GATB	87	68.613	Cricetulus_griseus_chok1gshd
ENSORLG00000007740	gatb	99	65.923	ENSCGRG00000012974	GATB	87	68.613	Cricetulus_griseus_crigri
ENSORLG00000007740	gatb	100	78.788	ENSCSEG00000004009	gatb	99	76.905	Cynoglossus_semilaevis
ENSORLG00000007740	gatb	99	82.556	ENSCVAG00000017180	gatb	98	82.556	Cyprinodon_variegatus
ENSORLG00000007740	gatb	99	70.732	ENSDARG00000037309	gatb	89	70.732	Danio_rerio
ENSORLG00000007740	gatb	99	65.385	ENSDNOG00000012683	GATB	88	65.385	Dasypus_novemcinctus
ENSORLG00000007740	gatb	99	63.895	ENSDORG00000010241	Gatb	89	63.895	Dipodomys_ordii
ENSORLG00000007740	gatb	99	43.469	FBgn0039153	GatB	94	43.469	Drosophila_melanogaster
ENSORLG00000007740	gatb	99	47.336	ENSETEG00000002356	GATB	88	47.336	Echinops_telfairi
ENSORLG00000007740	gatb	99	65.923	ENSEASG00005015868	GATB	88	65.923	Equus_asinus_asinus
ENSORLG00000007740	gatb	99	64.300	ENSECAG00000003539	GATB	88	64.300	Equus_caballus
ENSORLG00000007740	gatb	83	61.631	ENSEEUG00000002311	GATB	74	61.631	Erinaceus_europaeus
ENSORLG00000007740	gatb	100	73.131	ENSELUG00000013584	gatb	96	73.131	Esox_lucius
ENSORLG00000007740	gatb	99	65.517	ENSFCAG00000003207	GATB	88	65.517	Felis_catus
ENSORLG00000007740	gatb	90	64.865	ENSFALG00000002209	GATB	99	64.865	Ficedula_albicollis
ENSORLG00000007740	gatb	99	64.503	ENSFDAG00000006426	GATB	87	67.883	Fukomys_damarensis
ENSORLG00000007740	gatb	100	81.414	ENSFHEG00000008643	GATB	90	81.414	Fundulus_heteroclitus
ENSORLG00000007740	gatb	99	73.566	ENSGMOG00000001575	gatb	99	73.566	Gadus_morhua
ENSORLG00000007740	gatb	99	68.571	ENSGALG00000010097	GATB	90	68.571	Gallus_gallus
ENSORLG00000007740	gatb	100	80.404	ENSGAFG00000014422	gatb	91	80.404	Gambusia_affinis
ENSORLG00000007740	gatb	99	80.738	ENSGACG00000017143	gatb	99	80.738	Gasterosteus_aculeatus
ENSORLG00000007740	gatb	99	68.163	ENSGAGG00000007826	GATB	89	68.163	Gopherus_agassizii
ENSORLG00000007740	gatb	99	65.314	ENSGGOG00000011099	GATB	88	65.314	Gorilla_gorilla
ENSORLG00000007740	gatb	99	84.898	ENSHBUG00000009656	gatb	89	84.898	Haplochromis_burtoni
ENSORLG00000007740	gatb	99	65.517	ENSHGLG00000001316	GATB	87	69.492	Heterocephalus_glaber_female
ENSORLG00000007740	gatb	99	65.720	ENSHGLG00100004289	GATB	87	69.830	Heterocephalus_glaber_male
ENSORLG00000007740	gatb	99	74.797	ENSHCOG00000006270	gatb	89	74.797	Hippocampus_comes
ENSORLG00000007740	gatb	99	69.715	ENSIPUG00000013560	gatb	89	69.715	Ictalurus_punctatus
ENSORLG00000007740	gatb	99	66.126	ENSSTOG00000005689	GATB	88	66.667	Ictidomys_tridecemlineatus
ENSORLG00000007740	gatb	99	65.369	ENSJJAG00000016979	Gatb	86	69.212	Jaculus_jaculus
ENSORLG00000007740	gatb	100	85.455	ENSKMAG00000004727	gatb	90	85.455	Kryptolebias_marmoratus
ENSORLG00000007740	gatb	100	83.434	ENSLBEG00000019511	gatb	90	83.434	Labrus_bergylta
ENSORLG00000007740	gatb	99	63.083	ENSLACG00000004352	GATB	96	62.651	Latimeria_chalumnae
ENSORLG00000007740	gatb	99	63.105	ENSLOCG00000008564	gatb	89	63.105	Lepisosteus_oculatus
ENSORLG00000007740	gatb	99	65.923	ENSLAFG00000022607	GATB	88	65.923	Loxodonta_africana
ENSORLG00000007740	gatb	99	64.909	ENSMMUG00000011048	GATB	88	64.909	Macaca_mulatta
ENSORLG00000007740	gatb	99	64.706	ENSMNEG00000040147	GATB	88	64.706	Macaca_nemestrina
ENSORLG00000007740	gatb	99	65.112	ENSMLEG00000042135	GATB	88	65.112	Mandrillus_leucophaeus
ENSORLG00000007740	gatb	100	82.424	ENSMAMG00000013256	gatb	90	82.424	Mastacembelus_armatus
ENSORLG00000007740	gatb	100	84.646	ENSMZEG00005008495	gatb	90	84.646	Maylandia_zebra
ENSORLG00000007740	gatb	99	68.507	ENSMGAG00000004276	GATB	96	68.507	Meleagris_gallopavo
ENSORLG00000007740	gatb	99	66.531	ENSMAUG00000019099	Gatb	87	68.856	Mesocricetus_auratus
ENSORLG00000007740	gatb	99	64.503	ENSMICG00000004311	GATB	87	64.503	Microcebus_murinus
ENSORLG00000007740	gatb	99	65.235	ENSMOCG00000017566	Gatb	87	67.397	Microtus_ochrogaster
ENSORLG00000007740	gatb	98	75.885	ENSMMOG00000005376	gatb	87	75.885	Mola_mola
ENSORLG00000007740	gatb	100	65.253	ENSMODG00000001031	GATB	90	66.869	Monodelphis_domestica
ENSORLG00000007740	gatb	99	83.061	ENSMALG00000003418	gatb	90	83.061	Monopterus_albus
ENSORLG00000007740	gatb	99	64.300	MGP_CAROLIEiJ_G0025120	Gatb	87	66.990	Mus_caroli
ENSORLG00000007740	gatb	99	64.097	ENSMUSG00000028085	Gatb	87	66.667	Mus_musculus
ENSORLG00000007740	gatb	99	64.503	MGP_PahariEiJ_G0026563	Gatb	87	66.910	Mus_pahari
ENSORLG00000007740	gatb	99	64.097	MGP_SPRETEiJ_G0026062	Gatb	88	64.097	Mus_spretus
ENSORLG00000007740	gatb	99	64.706	ENSMPUG00000007394	GATB	88	64.706	Mustela_putorius_furo
ENSORLG00000007740	gatb	99	64.358	ENSMLUG00000008194	GATB	88	65.923	Myotis_lucifugus
ENSORLG00000007740	gatb	99	65.923	ENSNGAG00000002152	Gatb	87	68.689	Nannospalax_galili
ENSORLG00000007740	gatb	87	83.218	ENSNBRG00000005947	gatb	99	83.218	Neolamprologus_brichardi
ENSORLG00000007740	gatb	99	65.314	ENSNLEG00000005836	GATB	88	65.314	Nomascus_leucogenys
ENSORLG00000007740	gatb	99	65.992	ENSMEUG00000001479	GATB	99	65.992	Notamacropus_eugenii
ENSORLG00000007740	gatb	100	64.242	ENSOPRG00000011496	GATB	89	64.848	Ochotona_princeps
ENSORLG00000007740	gatb	99	63.692	ENSODEG00000005429	GATB	87	67.640	Octodon_degus
ENSORLG00000007740	gatb	100	85.253	ENSONIG00000010059	gatb	90	85.253	Oreochromis_niloticus
ENSORLG00000007740	gatb	87	63.972	ENSOANG00000005282	GATB	99	63.972	Ornithorhynchus_anatinus
ENSORLG00000007740	gatb	100	64.919	ENSOCUG00000016875	GATB	89	64.919	Oryctolagus_cuniculus
ENSORLG00000007740	gatb	100	96.970	ENSORLG00020016385	gatb	90	96.970	Oryzias_latipes_hni
ENSORLG00000007740	gatb	99	94.332	ENSOMEG00000003089	gatb	90	94.332	Oryzias_melastigma
ENSORLG00000007740	gatb	99	64.431	ENSOGAG00000014181	GATB	88	64.431	Otolemur_garnettii
ENSORLG00000007740	gatb	99	63.911	ENSOARG00000004355	GATB	88	63.911	Ovis_aries
ENSORLG00000007740	gatb	99	65.517	ENSPPAG00000041690	GATB	88	65.517	Pan_paniscus
ENSORLG00000007740	gatb	99	66.053	ENSPPRG00000004993	GATB	88	66.053	Panthera_pardus
ENSORLG00000007740	gatb	99	65.517	ENSPTIG00000021433	GATB	88	65.517	Panthera_tigris_altaica
ENSORLG00000007740	gatb	99	64.330	ENSPTRG00000016513	GATB	87	64.330	Pan_troglodytes
ENSORLG00000007740	gatb	99	62.677	ENSPANG00000024036	GATB	88	63.576	Papio_anubis
ENSORLG00000007740	gatb	99	70.445	ENSPKIG00000017076	gatb	96	70.445	Paramormyrops_kingsleyae
ENSORLG00000007740	gatb	99	65.918	ENSPSIG00000017832	GATB	89	65.918	Pelodiscus_sinensis
ENSORLG00000007740	gatb	97	75.724	ENSPMGG00000016497	gatb	89	75.497	Periophthalmus_magnuspinnatus
ENSORLG00000007740	gatb	99	65.314	ENSPEMG00000011096	Gatb	87	67.883	Peromyscus_maniculatus_bairdii
ENSORLG00000007740	gatb	100	66.869	ENSPCIG00000015213	GATB	90	67.071	Phascolarctos_cinereus
ENSORLG00000007740	gatb	100	80.120	ENSPFOG00000009933	gatb	91	80.120	Poecilia_formosa
ENSORLG00000007740	gatb	100	80.202	ENSPLAG00000015569	gatb	94	77.688	Poecilia_latipinna
ENSORLG00000007740	gatb	100	80.606	ENSPMEG00000006100	gatb	93	79.430	Poecilia_mexicana
ENSORLG00000007740	gatb	99	80.325	ENSPREG00000000128	gatb	93	77.755	Poecilia_reticulata
ENSORLG00000007740	gatb	99	65.720	ENSPPYG00000015121	GATB	88	66.258	Pongo_abelii
ENSORLG00000007740	gatb	99	53.144	ENSPCAG00000005950	GATB	88	53.144	Procavia_capensis
ENSORLG00000007740	gatb	99	64.503	ENSPCOG00000021777	GATB	89	65.031	Propithecus_coquereli
ENSORLG00000007740	gatb	99	64.503	ENSPVAG00000006891	GATB	88	64.503	Pteropus_vampyrus
ENSORLG00000007740	gatb	100	84.646	ENSPNYG00000013884	gatb	90	84.646	Pundamilia_nyererei
ENSORLG00000007740	gatb	99	70.243	ENSPNAG00000020150	gatb	89	70.243	Pygocentrus_nattereri
ENSORLG00000007740	gatb	99	63.286	ENSRNOG00000037655	Gatb	88	63.286	Rattus_norvegicus
ENSORLG00000007740	gatb	99	65.517	ENSRBIG00000006453	GATB	88	65.517	Rhinopithecus_bieti
ENSORLG00000007740	gatb	99	65.517	ENSRROG00000041575	GATB	88	65.517	Rhinopithecus_roxellana
ENSORLG00000007740	gatb	96	31.434	YBL080C	-	91	31.434	Saccharomyces_cerevisiae
ENSORLG00000007740	gatb	99	65.517	ENSSBOG00000022495	GATB	88	65.517	Saimiri_boliviensis_boliviensis
ENSORLG00000007740	gatb	100	65.657	ENSSHAG00000011763	GATB	90	65.657	Sarcophilus_harrisii
ENSORLG00000007740	gatb	100	71.313	ENSSFOG00015015565	gatb	89	71.313	Scleropages_formosus
ENSORLG00000007740	gatb	100	83.838	ENSSMAG00000003609	gatb	69	83.838	Scophthalmus_maximus
ENSORLG00000007740	gatb	100	84.444	ENSSDUG00000019847	gatb	90	84.444	Seriola_dumerili
ENSORLG00000007740	gatb	100	83.636	ENSSLDG00000010253	gatb	95	83.636	Seriola_lalandi_dorsalis
ENSORLG00000007740	gatb	72	62.044	ENSSARG00000003212	GATB	64	62.044	Sorex_araneus
ENSORLG00000007740	gatb	99	66.531	ENSSPUG00000014453	GATB	95	66.531	Sphenodon_punctatus
ENSORLG00000007740	gatb	100	85.657	ENSSPAG00000014465	gatb	98	85.657	Stegastes_partitus
ENSORLG00000007740	gatb	99	64.300	ENSSSCG00000009015	GATB	99	62.125	Sus_scrofa
ENSORLG00000007740	gatb	99	67.959	ENSTGUG00000004986	GATB	99	67.959	Taeniopygia_guttata
ENSORLG00000007740	gatb	99	74.498	ENSTRUG00000015238	gatb	91	74.498	Takifugu_rubripes
ENSORLG00000007740	gatb	82	76.658	ENSTNIG00000003378	gatb	99	76.658	Tetraodon_nigroviridis
ENSORLG00000007740	gatb	87	49.417	ENSTBEG00000009804	GATB	87	49.417	Tupaia_belangeri
ENSORLG00000007740	gatb	99	62.805	ENSTTRG00000010679	GATB	88	64.503	Tursiops_truncatus
ENSORLG00000007740	gatb	99	65.314	ENSUAMG00000021441	GATB	88	65.314	Ursus_americanus
ENSORLG00000007740	gatb	99	65.517	ENSUMAG00000016157	GATB	88	65.517	Ursus_maritimus
ENSORLG00000007740	gatb	77	73.723	ENSVPAG00000010844	GATB	69	73.723	Vicugna_pacos
ENSORLG00000007740	gatb	99	65.440	ENSVVUG00000025083	GATB	88	65.440	Vulpes_vulpes
ENSORLG00000007740	gatb	98	66.804	ENSXETG00000034167	GATB	97	67.143	Xenopus_tropicalis
ENSORLG00000007740	gatb	100	80.606	ENSXMAG00000008071	gatb	89	86.452	Xiphophorus_maculatus