EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008036 (Gene tree)
Gene ID: 101172750
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 18852 bases
Position: chr13:16910771-16929622
Accession: 101172750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010082	RRM_4	PF10598.9	1e-47	1	1
ENSORLP00000031430	RRM_4	PF10598.9	1e-47	1	1
ENSORLP00000029385	RRM_4	PF10598.9	1e-47	1	1
ENSORLP00000010082	U5_2-snRNA_bdg	PF10597.9	8.2e-74	1	1
ENSORLP00000031430	U5_2-snRNA_bdg	PF10597.9	8.3e-74	1	1
ENSORLP00000029385	U5_2-snRNA_bdg	PF10597.9	8.4e-74	1	1
ENSORLP00000010082	PRO8NT	PF08082.11	3.5e-87	1	1
ENSORLP00000031430	PRO8NT	PF08082.11	3.5e-87	1	1
ENSORLP00000029385	PRO8NT	PF08082.11	3.6e-87	1	1
ENSORLP00000031430	U6-snRNA_bdg	PF10596.9	2.1e-89	1	1
ENSORLP00000029385	U6-snRNA_bdg	PF10596.9	2.1e-89	1	1
ENSORLP00000010082	U6-snRNA_bdg	PF10596.9	2.1e-89	1	1
ENSORLP00000010082	PROCN	PF08083.11	2.6e-235	1	1
ENSORLP00000031430	PROCN	PF08083.11	2.6e-235	1	1
ENSORLP00000029385	PROCN	PF08083.11	2.7e-235	1	1
ENSORLP00000010082	PRP8_domainIV	PF12134.8	4.9e-130	1	1
ENSORLP00000031430	PRP8_domainIV	PF12134.8	4.9e-130	1	1
ENSORLP00000029385	PRP8_domainIV	PF12134.8	4.9e-130	1	1
ENSORLP00000010082	PROCT	PF08084.11	3.2e-53	1	1
ENSORLP00000031430	PROCT	PF08084.11	3.2e-53	1	1
ENSORLP00000029385	PROCT	PF08084.11	7.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000036529	-	7800	-	ENSORLP00000029385	2366 (aa)	-	-
ENSORLT00000041627	-	7885	XM_023961976	ENSORLP00000031430	2354 (aa)	XP_023817744	UPI000CE25274
ENSORLT00000010083	-	7023	-	ENSORLP00000010082	2340 (aa)	-	H2LVF1

Gene Model

Click here to download ENSORLG00000008036's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008036's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008036	prpf8	99	97.687	ENSG00000174231	PRPF8	99	97.687	Homo_sapiens
ENSORLG00000008036	prpf8	100	98.556	ENSAPOG00000010079	prpf8	100	98.556	Acanthochromis_polyacanthus
ENSORLG00000008036	prpf8	99	97.687	ENSAMEG00000007940	PRPF8	99	97.687	Ailuropoda_melanoleuca
ENSORLG00000008036	prpf8	100	97.527	ENSACIG00000018280	prpf8	100	97.287	Amphilophus_citrinellus
ENSORLG00000008036	prpf8	100	98.513	ENSAOCG00000010725	prpf8	100	98.513	Amphiprion_ocellaris
ENSORLG00000008036	prpf8	100	98.513	ENSAPEG00000014397	prpf8	100	98.513	Amphiprion_percula
ENSORLG00000008036	prpf8	100	97.749	ENSATEG00000010062	prpf8	100	97.749	Anabas_testudineus
ENSORLG00000008036	prpf8	96	98.088	ENSAPLG00000010357	PRPF8	100	98.132	Anas_platyrhynchos
ENSORLG00000008036	prpf8	82	96.235	ENSACAG00000014784	PRPF8	99	96.235	Anolis_carolinensis
ENSORLG00000008036	prpf8	99	97.687	ENSANAG00000032629	PRPF8	99	97.687	Aotus_nancymaae
ENSORLG00000008036	prpf8	100	98.889	ENSACLG00000020858	prpf8	100	98.641	Astatotilapia_calliptera
ENSORLG00000008036	prpf8	100	97.961	ENSAMXG00000020291	prpf8	100	97.961	Astyanax_mexicanus
ENSORLG00000008036	prpf8	99	97.687	ENSBTAG00000011488	PRPF8	99	97.687	Bos_taurus
ENSORLG00000008036	prpf8	99	86.237	WBGene00004187	prp-8	99	86.721	Caenorhabditis_elegans
ENSORLG00000008036	prpf8	99	97.687	ENSCJAG00000001911	PRPF8	99	97.687	Callithrix_jacchus
ENSORLG00000008036	prpf8	99	97.687	ENSCAFG00000019221	PRPF8	99	97.687	Canis_familiaris
ENSORLG00000008036	prpf8	96	98.082	ENSCAFG00020009943	PRPF8	100	98.126	Canis_lupus_dingo
ENSORLG00000008036	prpf8	99	97.687	ENSCHIG00000017499	PRPF8	99	97.687	Capra_hircus
ENSORLG00000008036	prpf8	99	97.687	ENSTSYG00000014120	PRPF8	99	97.687	Carlito_syrichta
ENSORLG00000008036	prpf8	96	95.859	ENSCAPG00000009459	PRPF8	99	95.902	Cavia_aperea
ENSORLG00000008036	prpf8	99	97.687	ENSCPOG00000010379	PRPF8	99	97.687	Cavia_porcellus
ENSORLG00000008036	prpf8	99	97.687	ENSCCAG00000031983	-	99	97.687	Cebus_capucinus
ENSORLG00000008036	prpf8	99	97.687	ENSCATG00000038595	PRPF8	99	97.687	Cercocebus_atys
ENSORLG00000008036	prpf8	99	97.687	ENSCLAG00000004388	PRPF8	99	97.687	Chinchilla_lanigera
ENSORLG00000008036	prpf8	99	97.687	ENSCSAG00000013929	PRPF8	99	97.687	Chlorocebus_sabaeus
ENSORLG00000008036	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	87	97.333	Choloepus_hoffmanni
ENSORLG00000008036	prpf8	100	96.984	ENSCPBG00000020409	PRPF8	100	96.984	Chrysemys_picta_bellii
ENSORLG00000008036	prpf8	98	92.755	ENSCSAVG00000007825	-	100	91.194	Ciona_savignyi
ENSORLG00000008036	prpf8	99	97.687	ENSCANG00000043088	PRPF8	99	97.687	Colobus_angolensis_palliatus
ENSORLG00000008036	prpf8	73	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSORLG00000008036	prpf8	100	98.216	ENSCSEG00000007905	prpf8	100	98.173	Cynoglossus_semilaevis
ENSORLG00000008036	prpf8	100	98.003	ENSDARG00000026180	prpf8	100	98.003	Danio_rerio
ENSORLG00000008036	prpf8	93	97.791	ENSDNOG00000018471	PRPF8	99	97.791	Dasypus_novemcinctus
ENSORLG00000008036	prpf8	83	96.380	ENSDORG00000006185	Prpf8	96	96.380	Dipodomys_ordii
ENSORLG00000008036	prpf8	99	91.345	FBgn0033688	Prp8	97	91.749	Drosophila_melanogaster
ENSORLG00000008036	prpf8	99	92.291	ENSETEG00000017592	PRPF8	99	92.291	Echinops_telfairi
ENSORLG00000008036	prpf8	99	93.433	ENSEBUG00000006548	prpf8	99	93.433	Eptatretus_burgeri
ENSORLG00000008036	prpf8	99	97.687	ENSEASG00005009514	PRPF8	99	98.486	Equus_asinus_asinus
ENSORLG00000008036	prpf8	97	98.154	ENSECAG00000021318	PRPF8	100	98.154	Equus_caballus
ENSORLG00000008036	prpf8	67	98.519	ENSEEUG00000012120	-	66	98.519	Erinaceus_europaeus
ENSORLG00000008036	prpf8	98	96.918	ENSELUG00000007120	prpf8	99	97.632	Esox_lucius
ENSORLG00000008036	prpf8	99	97.687	ENSFCAG00000006297	PRPF8	99	97.687	Felis_catus
ENSORLG00000008036	prpf8	100	97.026	ENSFALG00000006628	PRPF8	100	97.026	Ficedula_albicollis
ENSORLG00000008036	prpf8	99	97.687	ENSFDAG00000004711	PRPF8	99	97.687	Fukomys_damarensis
ENSORLG00000008036	prpf8	100	98.301	ENSFHEG00000021084	prpf8	100	98.301	Fundulus_heteroclitus
ENSORLG00000008036	prpf8	100	95.966	ENSGMOG00000002028	prpf8	99	96.689	Gadus_morhua
ENSORLG00000008036	prpf8	100	97.026	ENSGALG00000002943	PRPF8	100	97.026	Gallus_gallus
ENSORLG00000008036	prpf8	99	98.977	ENSGAFG00000010337	prpf8	99	98.977	Gambusia_affinis
ENSORLG00000008036	prpf8	100	98.598	ENSGACG00000008504	prpf8	100	98.677	Gasterosteus_aculeatus
ENSORLG00000008036	prpf8	100	97.026	ENSGAGG00000008350	PRPF8	100	97.026	Gopherus_agassizii
ENSORLG00000008036	prpf8	99	97.687	ENSGGOG00000005516	PRPF8	99	97.687	Gorilla_gorilla
ENSORLG00000008036	prpf8	100	98.088	ENSHBUG00000016192	prpf8	100	98.046	Haplochromis_burtoni
ENSORLG00000008036	prpf8	99	97.687	ENSHGLG00000012029	PRPF8	99	97.687	Heterocephalus_glaber_female
ENSORLG00000008036	prpf8	99	97.687	ENSHGLG00100016494	PRPF8	99	97.687	Heterocephalus_glaber_male
ENSORLG00000008036	prpf8	100	98.428	ENSHCOG00000016414	prpf8	100	98.428	Hippocampus_comes
ENSORLG00000008036	prpf8	100	97.876	ENSIPUG00000023230	prpf8	100	97.876	Ictalurus_punctatus
ENSORLG00000008036	prpf8	99	97.687	ENSSTOG00000005128	PRPF8	99	97.687	Ictidomys_tridecemlineatus
ENSORLG00000008036	prpf8	99	95.546	ENSJJAG00000021159	Prpf8	99	95.546	Jaculus_jaculus
ENSORLG00000008036	prpf8	99	98.678	ENSKMAG00000016118	prpf8	100	98.678	Kryptolebias_marmoratus
ENSORLG00000008036	prpf8	100	98.343	ENSLBEG00000026903	prpf8	100	98.343	Labrus_bergylta
ENSORLG00000008036	prpf8	95	94.763	ENSLACG00000010479	PRPF8	99	98.261	Latimeria_chalumnae
ENSORLG00000008036	prpf8	99	98.540	ENSLOCG00000005409	prpf8	99	98.540	Lepisosteus_oculatus
ENSORLG00000008036	prpf8	99	97.687	ENSLAFG00000015445	PRPF8	99	97.687	Loxodonta_africana
ENSORLG00000008036	prpf8	99	97.687	ENSMFAG00000039995	PRPF8	99	97.687	Macaca_fascicularis
ENSORLG00000008036	prpf8	99	97.687	ENSMMUG00000004820	PRPF8	99	97.687	Macaca_mulatta
ENSORLG00000008036	prpf8	99	97.687	ENSMNEG00000035713	PRPF8	99	97.687	Macaca_nemestrina
ENSORLG00000008036	prpf8	99	97.687	ENSMLEG00000037937	PRPF8	99	97.687	Mandrillus_leucophaeus
ENSORLG00000008036	prpf8	100	98.386	ENSMAMG00000008919	prpf8	100	98.386	Mastacembelus_armatus
ENSORLG00000008036	prpf8	100	98.889	ENSMZEG00005015073	prpf8	100	98.641	Maylandia_zebra
ENSORLG00000008036	prpf8	100	97.026	ENSMGAG00000004769	PRPF8	100	97.026	Meleagris_gallopavo
ENSORLG00000008036	prpf8	99	97.687	ENSMICG00000010320	PRPF8	99	97.687	Microcebus_murinus
ENSORLG00000008036	prpf8	99	97.687	ENSMOCG00000016838	Prpf8	99	97.687	Microtus_ochrogaster
ENSORLG00000008036	prpf8	100	98.046	ENSMMOG00000011887	prpf8	100	98.046	Mola_mola
ENSORLG00000008036	prpf8	99	97.602	ENSMODG00000010480	PRPF8	99	97.602	Monodelphis_domestica
ENSORLG00000008036	prpf8	97	98.536	ENSMALG00000003558	prpf8	100	98.536	Monopterus_albus
ENSORLG00000008036	prpf8	99	97.645	MGP_CAROLIEiJ_G0016740	Prpf8	99	97.645	Mus_caroli
ENSORLG00000008036	prpf8	99	97.645	ENSMUSG00000020850	Prpf8	99	97.645	Mus_musculus
ENSORLG00000008036	prpf8	99	97.602	MGP_PahariEiJ_G0017877	Prpf8	99	97.602	Mus_pahari
ENSORLG00000008036	prpf8	99	97.645	MGP_SPRETEiJ_G0017583	Prpf8	99	97.645	Mus_spretus
ENSORLG00000008036	prpf8	99	97.687	ENSMPUG00000013227	PRPF8	99	97.687	Mustela_putorius_furo
ENSORLG00000008036	prpf8	99	97.562	ENSMLUG00000002666	PRPF8	99	97.562	Myotis_lucifugus
ENSORLG00000008036	prpf8	99	95.931	ENSNGAG00000005305	Prpf8	99	95.931	Nannospalax_galili
ENSORLG00000008036	prpf8	100	98.932	ENSNBRG00000013127	prpf8	100	98.683	Neolamprologus_brichardi
ENSORLG00000008036	prpf8	97	96.696	ENSNLEG00000000897	PRPF8	98	96.756	Nomascus_leucogenys
ENSORLG00000008036	prpf8	98	96.262	ENSMEUG00000015999	PRPF8	100	96.262	Notamacropus_eugenii
ENSORLG00000008036	prpf8	99	96.188	ENSOPRG00000003102	PRPF8	99	96.188	Ochotona_princeps
ENSORLG00000008036	prpf8	99	97.687	ENSODEG00000008468	PRPF8	99	97.687	Octodon_degus
ENSORLG00000008036	prpf8	100	98.932	ENSONIG00000008153	prpf8	100	98.683	Oreochromis_niloticus
ENSORLG00000008036	prpf8	82	98.973	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSORLG00000008036	prpf8	99	97.687	ENSOCUG00000000081	PRPF8	99	97.687	Oryctolagus_cuniculus
ENSORLG00000008036	prpf8	100	99.958	ENSORLG00020021070	prpf8	100	99.958	Oryzias_latipes_hni
ENSORLG00000008036	prpf8	100	99.958	ENSORLG00015002340	prpf8	100	99.958	Oryzias_latipes_hsok
ENSORLG00000008036	prpf8	100	97.961	ENSOMEG00000016866	prpf8	100	97.961	Oryzias_melastigma
ENSORLG00000008036	prpf8	99	97.562	ENSOARG00000013312	PRPF8	99	97.562	Ovis_aries
ENSORLG00000008036	prpf8	99	97.687	ENSPPAG00000042753	PRPF8	99	97.687	Pan_paniscus
ENSORLG00000008036	prpf8	99	97.687	ENSPPRG00000008746	PRPF8	99	97.687	Panthera_pardus
ENSORLG00000008036	prpf8	99	97.602	ENSPTIG00000019200	PRPF8	99	97.602	Panthera_tigris_altaica
ENSORLG00000008036	prpf8	99	97.687	ENSPTRG00000039576	PRPF8	99	97.687	Pan_troglodytes
ENSORLG00000008036	prpf8	98	98.175	ENSPANG00000024607	PRPF8	98	98.175	Papio_anubis
ENSORLG00000008036	prpf8	100	98.003	ENSPKIG00000011201	prpf8	100	98.003	Paramormyrops_kingsleyae
ENSORLG00000008036	prpf8	100	96.941	ENSPSIG00000013393	PRPF8	100	96.941	Pelodiscus_sinensis
ENSORLG00000008036	prpf8	99	97.687	ENSPEMG00000021699	Prpf8	99	97.687	Peromyscus_maniculatus_bairdii
ENSORLG00000008036	prpf8	96	93.678	ENSPMAG00000005438	prpf8	100	93.764	Petromyzon_marinus
ENSORLG00000008036	prpf8	99	97.602	ENSPCIG00000022603	PRPF8	100	98.037	Phascolarctos_cinereus
ENSORLG00000008036	prpf8	100	98.813	ENSPFOG00000007005	prpf8	100	98.813	Poecilia_formosa
ENSORLG00000008036	prpf8	100	96.729	ENSPLAG00000020777	prpf8	100	96.729	Poecilia_latipinna
ENSORLG00000008036	prpf8	100	98.813	ENSPMEG00000004051	prpf8	100	98.813	Poecilia_mexicana
ENSORLG00000008036	prpf8	100	98.855	ENSPREG00000021902	prpf8	100	98.855	Poecilia_reticulata
ENSORLG00000008036	prpf8	99	97.687	ENSPPYG00000007777	PRPF8	99	97.687	Pongo_abelii
ENSORLG00000008036	prpf8	90	96.782	ENSPCAG00000008938	PRPF8	89	96.782	Procavia_capensis
ENSORLG00000008036	prpf8	99	97.687	ENSPCOG00000015182	PRPF8	99	97.687	Propithecus_coquereli
ENSORLG00000008036	prpf8	93	98.449	ENSPVAG00000002134	PRPF8	93	98.503	Pteropus_vampyrus
ENSORLG00000008036	prpf8	100	98.088	ENSPNYG00000016356	prpf8	100	98.046	Pundamilia_nyererei
ENSORLG00000008036	prpf8	100	97.961	ENSPNAG00000009247	prpf8	100	97.961	Pygocentrus_nattereri
ENSORLG00000008036	prpf8	99	97.645	ENSRNOG00000003495	Prpf8	99	97.645	Rattus_norvegicus
ENSORLG00000008036	prpf8	99	97.687	ENSRBIG00000031219	PRPF8	100	97.680	Rhinopithecus_bieti
ENSORLG00000008036	prpf8	99	97.687	ENSRROG00000038014	PRPF8	100	97.680	Rhinopithecus_roxellana
ENSORLG00000008036	prpf8	99	62.307	YHR165C	PRP8	96	62.377	Saccharomyces_cerevisiae
ENSORLG00000008036	prpf8	99	97.687	ENSSBOG00000029717	PRPF8	99	97.687	Saimiri_boliviensis_boliviensis
ENSORLG00000008036	prpf8	99	97.559	ENSSHAG00000006167	PRPF8	99	97.559	Sarcophilus_harrisii
ENSORLG00000008036	prpf8	100	97.918	ENSSFOG00015013905	prpf8	100	97.918	Scleropages_formosus
ENSORLG00000008036	prpf8	100	98.301	ENSSMAG00000017736	prpf8	100	98.301	Scophthalmus_maximus
ENSORLG00000008036	prpf8	100	98.641	ENSSDUG00000003029	prpf8	100	98.641	Seriola_dumerili
ENSORLG00000008036	prpf8	68	99.812	ENSSLDG00000017096	prpf8	100	99.812	Seriola_lalandi_dorsalis
ENSORLG00000008036	prpf8	87	94.408	ENSSARG00000002892	PRPF8	87	94.408	Sorex_araneus
ENSORLG00000008036	prpf8	99	97.730	ENSSPUG00000007463	PRPF8	99	97.730	Sphenodon_punctatus
ENSORLG00000008036	prpf8	100	97.961	ENSSPAG00000015639	prpf8	100	97.961	Stegastes_partitus
ENSORLG00000008036	prpf8	99	97.687	ENSSSCG00000017817	PRPF8	99	97.687	Sus_scrofa
ENSORLG00000008036	prpf8	52	98.429	ENSTGUG00000015597	-	95	98.429	Taeniopygia_guttata
ENSORLG00000008036	prpf8	100	97.026	ENSTGUG00000005648	-	100	97.026	Taeniopygia_guttata
ENSORLG00000008036	prpf8	100	98.131	ENSTRUG00000015906	prpf8	100	98.131	Takifugu_rubripes
ENSORLG00000008036	prpf8	95	99.403	ENSTNIG00000003460	prpf8	99	99.403	Tetraodon_nigroviridis
ENSORLG00000008036	prpf8	89	98.776	ENSTBEG00000006431	PRPF8	89	98.843	Tupaia_belangeri
ENSORLG00000008036	prpf8	99	97.088	ENSTTRG00000006869	PRPF8	99	97.088	Tursiops_truncatus
ENSORLG00000008036	prpf8	54	96.585	ENSUAMG00000015644	-	95	96.585	Ursus_americanus
ENSORLG00000008036	prpf8	99	97.430	ENSUMAG00000009385	PRPF8	99	97.430	Ursus_maritimus
ENSORLG00000008036	prpf8	71	97.931	ENSVPAG00000006063	-	70	97.931	Vicugna_pacos
ENSORLG00000008036	prpf8	99	97.646	ENSVVUG00000021695	PRPF8	99	97.646	Vulpes_vulpes
ENSORLG00000008036	prpf8	99	97.637	ENSXETG00000022259	prpf8	99	97.637	Xenopus_tropicalis
ENSORLG00000008036	prpf8	100	98.513	ENSXCOG00000012775	prpf8	100	98.471	Xiphophorus_couchianus
ENSORLG00000008036	prpf8	100	98.471	ENSXMAG00000008505	prpf8	100	98.428	Xiphophorus_maculatus