EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000008077 (Gene tree)
Gene ID: 101172823
Gene Symbol: rbm19
Alias: -
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 16756 bases
Position: chr9:13384653-13401408
Accession: 101172823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000028233	RRM_1	PF00076.22	3e-86	1	6
ENSORLP00000028233	RRM_1	PF00076.22	3e-86	2	6
ENSORLP00000028233	RRM_1	PF00076.22	3e-86	3	6
ENSORLP00000028233	RRM_1	PF00076.22	3e-86	4	6
ENSORLP00000028233	RRM_1	PF00076.22	3e-86	5	6
ENSORLP00000028233	RRM_1	PF00076.22	3e-86	6	6
ENSORLP00000033197	RRM_1	PF00076.22	3e-86	1	6
ENSORLP00000033197	RRM_1	PF00076.22	3e-86	2	6
ENSORLP00000033197	RRM_1	PF00076.22	3e-86	3	6
ENSORLP00000033197	RRM_1	PF00076.22	3e-86	4	6
ENSORLP00000033197	RRM_1	PF00076.22	3e-86	5	6
ENSORLP00000033197	RRM_1	PF00076.22	3e-86	6	6
ENSORLP00000010136	RRM_1	PF00076.22	3.6e-86	1	6
ENSORLP00000010136	RRM_1	PF00076.22	3.6e-86	2	6
ENSORLP00000010136	RRM_1	PF00076.22	3.6e-86	3	6
ENSORLP00000010136	RRM_1	PF00076.22	3.6e-86	4	6
ENSORLP00000010136	RRM_1	PF00076.22	3.6e-86	5	6
ENSORLP00000010136	RRM_1	PF00076.22	3.6e-86	6	6
ENSORLP00000044267	RRM_1	PF00076.22	1.3e-85	1	6
ENSORLP00000044267	RRM_1	PF00076.22	1.3e-85	2	6
ENSORLP00000044267	RRM_1	PF00076.22	1.3e-85	3	6
ENSORLP00000044267	RRM_1	PF00076.22	1.3e-85	4	6
ENSORLP00000044267	RRM_1	PF00076.22	1.3e-85	5	6
ENSORLP00000044267	RRM_1	PF00076.22	1.3e-85	6	6
ENSORLP00000037011	RRM_1	PF00076.22	1.3e-85	1	6
ENSORLP00000037011	RRM_1	PF00076.22	1.3e-85	2	6
ENSORLP00000037011	RRM_1	PF00076.22	1.3e-85	3	6
ENSORLP00000037011	RRM_1	PF00076.22	1.3e-85	4	6
ENSORLP00000037011	RRM_1	PF00076.22	1.3e-85	5	6
ENSORLP00000037011	RRM_1	PF00076.22	1.3e-85	6	6
ENSORLP00000037624	RRM_1	PF00076.22	1.3e-85	1	6
ENSORLP00000037624	RRM_1	PF00076.22	1.3e-85	2	6
ENSORLP00000037624	RRM_1	PF00076.22	1.3e-85	3	6
ENSORLP00000037624	RRM_1	PF00076.22	1.3e-85	4	6
ENSORLP00000037624	RRM_1	PF00076.22	1.3e-85	5	6
ENSORLP00000037624	RRM_1	PF00076.22	1.3e-85	6	6
ENSORLP00000040629	RRM_1	PF00076.22	1.7e-81	1	6
ENSORLP00000040629	RRM_1	PF00076.22	1.7e-81	2	6
ENSORLP00000040629	RRM_1	PF00076.22	1.7e-81	3	6
ENSORLP00000040629	RRM_1	PF00076.22	1.7e-81	4	6
ENSORLP00000040629	RRM_1	PF00076.22	1.7e-81	5	6
ENSORLP00000040629	RRM_1	PF00076.22	1.7e-81	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000027478	-	3362	-	ENSORLP00000028233	900 (aa)	-	-
ENSORLT00000036357	-	3362	XM_023958498	ENSORLP00000044267	900 (aa)	XP_023814266	-
ENSORLT00000034501	-	3362	-	ENSORLP00000037624	900 (aa)	-	-
ENSORLT00000010137	-	3490	XM_011479201	ENSORLP00000010136	923 (aa)	XP_011477503	H2LVK3
ENSORLT00000041625	-	3704	-	ENSORLP00000040629	896 (aa)	-	-
ENSORLT00000030809	-	3621	-	ENSORLP00000033197	900 (aa)	-	-
ENSORLT00000040049	-	3362	-	ENSORLP00000037011	900 (aa)	-	-

Gene Model

Click here to download ENSORLG00000008077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000008077	rbm19	63	34.667	ENSORLG00000003008	-	57	34.667
ENSORLG00000008077	rbm19	63	36.000	ENSORLG00000002691	pabpc1a	68	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008077	rbm19	99	58.632	ENSG00000122965	RBM19	85	74.737	Homo_sapiens
ENSORLG00000008077	rbm19	100	80.150	ENSAPOG00000010507	rbm19	100	81.760	Acanthochromis_polyacanthus
ENSORLG00000008077	rbm19	99	57.534	ENSAMEG00000008544	RBM19	99	57.276	Ailuropoda_melanoleuca
ENSORLG00000008077	rbm19	99	80.994	ENSACIG00000017780	rbm19	99	81.347	Amphilophus_citrinellus
ENSORLG00000008077	rbm19	100	81.886	ENSAOCG00000008554	rbm19	100	82.101	Amphiprion_ocellaris
ENSORLG00000008077	rbm19	99	79.167	ENSAPEG00000022381	rbm19	97	79.780	Amphiprion_percula
ENSORLG00000008077	rbm19	99	79.621	ENSATEG00000007000	rbm19	99	78.850	Anabas_testudineus
ENSORLG00000008077	rbm19	99	56.264	ENSAPLG00000015319	RBM19	99	55.956	Anas_platyrhynchos
ENSORLG00000008077	rbm19	100	57.114	ENSACAG00000005065	RBM19	99	56.867	Anolis_carolinensis
ENSORLG00000008077	rbm19	99	59.451	ENSANAG00000024136	RBM19	99	59.025	Aotus_nancymaae
ENSORLG00000008077	rbm19	100	73.707	ENSACLG00000001399	rbm19	100	73.684	Astatotilapia_calliptera
ENSORLG00000008077	rbm19	65	70.973	ENSAMXG00000017073	rbm19	99	61.889	Astyanax_mexicanus
ENSORLG00000008077	rbm19	99	58.742	ENSBTAG00000031824	RBM19	99	58.559	Bos_taurus
ENSORLG00000008077	rbm19	78	47.368	WBGene00004315	rbd-1	91	47.368	Caenorhabditis_elegans
ENSORLG00000008077	rbm19	99	59.431	ENSCJAG00000009798	RBM19	99	58.738	Callithrix_jacchus
ENSORLG00000008077	rbm19	99	58.377	ENSCAFG00000009146	RBM19	98	58.171	Canis_familiaris
ENSORLG00000008077	rbm19	99	58.483	ENSCAFG00020017862	RBM19	98	58.273	Canis_lupus_dingo
ENSORLG00000008077	rbm19	99	58.006	ENSCHIG00000014917	RBM19	99	58.152	Capra_hircus
ENSORLG00000008077	rbm19	91	56.981	ENSTSYG00000007207	RBM19	96	56.963	Carlito_syrichta
ENSORLG00000008077	rbm19	99	58.037	ENSCAPG00000006869	RBM19	98	58.448	Cavia_aperea
ENSORLG00000008077	rbm19	99	58.754	ENSCPOG00000026629	RBM19	99	59.365	Cavia_porcellus
ENSORLG00000008077	rbm19	99	59.158	ENSCCAG00000021665	-	99	59.006	Cebus_capucinus
ENSORLG00000008077	rbm19	86	52.347	ENSCCAG00000026637	-	99	51.267	Cebus_capucinus
ENSORLG00000008077	rbm19	99	58.271	ENSCATG00000035841	RBM19	99	57.906	Cercocebus_atys
ENSORLG00000008077	rbm19	99	57.456	ENSCLAG00000009965	RBM19	99	57.231	Chinchilla_lanigera
ENSORLG00000008077	rbm19	99	71.921	ENSCSAG00000002352	RBM19	93	71.921	Chlorocebus_sabaeus
ENSORLG00000008077	rbm19	99	61.218	ENSCPBG00000011990	RBM19	99	58.716	Chrysemys_picta_bellii
ENSORLG00000008077	rbm19	77	54.677	ENSCING00000023076	-	94	53.710	Ciona_intestinalis
ENSORLG00000008077	rbm19	99	59.536	ENSCANG00000035927	RBM19	99	58.738	Colobus_angolensis_palliatus
ENSORLG00000008077	rbm19	99	58.130	ENSCGRG00001000323	Rbm19	99	58.229	Cricetulus_griseus_chok1gshd
ENSORLG00000008077	rbm19	99	58.130	ENSCGRG00000010371	Rbm19	99	58.229	Cricetulus_griseus_crigri
ENSORLG00000008077	rbm19	100	74.709	ENSCSEG00000017436	rbm19	94	81.579	Cynoglossus_semilaevis
ENSORLG00000008077	rbm19	100	75.647	ENSCVAG00000000300	rbm19	100	75.081	Cyprinodon_variegatus
ENSORLG00000008077	rbm19	99	65.236	ENSDARG00000042590	rbm19	99	64.990	Danio_rerio
ENSORLG00000008077	rbm19	99	57.234	ENSDNOG00000024534	RBM19	95	57.544	Dasypus_novemcinctus
ENSORLG00000008077	rbm19	99	58.396	ENSDORG00000008549	Rbm19	100	58.396	Dipodomys_ordii
ENSORLG00000008077	rbm19	99	38.965	FBgn0036018	CG3335	71	42.185	Drosophila_melanogaster
ENSORLG00000008077	rbm19	83	76.812	ENSETEG00000016887	-	56	76.471	Echinops_telfairi
ENSORLG00000008077	rbm19	82	43.671	ENSEBUG00000008521	-	94	43.233	Eptatretus_burgeri
ENSORLG00000008077	rbm19	99	57.884	ENSEASG00005009452	RBM19	99	57.541	Equus_asinus_asinus
ENSORLG00000008077	rbm19	99	58.650	ENSECAG00000023716	RBM19	99	57.835	Equus_caballus
ENSORLG00000008077	rbm19	99	70.953	ENSELUG00000012561	rbm19	99	69.838	Esox_lucius
ENSORLG00000008077	rbm19	99	58.501	ENSFCAG00000002962	RBM19	98	58.014	Felis_catus
ENSORLG00000008077	rbm19	99	59.552	ENSFALG00000007768	RBM19	99	59.139	Ficedula_albicollis
ENSORLG00000008077	rbm19	99	58.166	ENSFDAG00000004629	RBM19	99	57.379	Fukomys_damarensis
ENSORLG00000008077	rbm19	100	75.457	ENSFHEG00000012578	rbm19	100	75.565	Fundulus_heteroclitus
ENSORLG00000008077	rbm19	99	68.502	ENSGMOG00000013120	rbm19	100	68.502	Gadus_morhua
ENSORLG00000008077	rbm19	99	59.979	ENSGALG00000008289	RBM19	99	59.482	Gallus_gallus
ENSORLG00000008077	rbm19	100	76.293	ENSGAFG00000012337	rbm19	100	76.559	Gambusia_affinis
ENSORLG00000008077	rbm19	99	77.416	ENSGACG00000009462	rbm19	100	77.742	Gasterosteus_aculeatus
ENSORLG00000008077	rbm19	61	67.851	ENSGAGG00000019457	RBM19	99	66.781	Gopherus_agassizii
ENSORLG00000008077	rbm19	99	58.632	ENSGGOG00000007371	RBM19	99	58.635	Gorilla_gorilla
ENSORLG00000008077	rbm19	100	76.649	ENSHBUG00000009047	rbm19	100	76.375	Haplochromis_burtoni
ENSORLG00000008077	rbm19	99	57.983	ENSHGLG00000010899	RBM19	99	57.547	Heterocephalus_glaber_female
ENSORLG00000008077	rbm19	99	57.484	ENSHGLG00100017936	RBM19	99	56.950	Heterocephalus_glaber_male
ENSORLG00000008077	rbm19	99	76.322	ENSHCOG00000016446	rbm19	99	75.996	Hippocampus_comes
ENSORLG00000008077	rbm19	99	64.217	ENSIPUG00000023849	rbm19	99	65.536	Ictalurus_punctatus
ENSORLG00000008077	rbm19	100	78.885	ENSKMAG00000014807	rbm19	94	85.759	Kryptolebias_marmoratus
ENSORLG00000008077	rbm19	100	78.135	ENSLBEG00000012897	rbm19	100	78.028	Labrus_bergylta
ENSORLG00000008077	rbm19	69	62.604	ENSLACG00000012030	RBM19	94	61.741	Latimeria_chalumnae
ENSORLG00000008077	rbm19	99	65.180	ENSLOCG00000008341	rbm19	99	64.643	Lepisosteus_oculatus
ENSORLG00000008077	rbm19	91	56.794	ENSLAFG00000004187	RBM19	100	56.330	Loxodonta_africana
ENSORLG00000008077	rbm19	99	59.326	ENSMFAG00000046091	RBM19	99	56.354	Macaca_fascicularis
ENSORLG00000008077	rbm19	99	59.431	ENSMMUG00000010496	RBM19	99	58.738	Macaca_mulatta
ENSORLG00000008077	rbm19	99	54.989	ENSMNEG00000028452	RBM19	99	56.228	Macaca_nemestrina
ENSORLG00000008077	rbm19	99	57.789	ENSMLEG00000034550	RBM19	98	56.804	Mandrillus_leucophaeus
ENSORLG00000008077	rbm19	100	80.323	ENSMAMG00000014397	rbm19	100	80.430	Mastacembelus_armatus
ENSORLG00000008077	rbm19	100	79.504	ENSMZEG00005016607	rbm19	100	79.288	Maylandia_zebra
ENSORLG00000008077	rbm19	99	53.378	ENSMGAG00000010087	RBM19	99	52.751	Meleagris_gallopavo
ENSORLG00000008077	rbm19	99	58.811	ENSMAUG00000019290	Rbm19	99	58.891	Mesocricetus_auratus
ENSORLG00000008077	rbm19	99	58.624	ENSMICG00000014423	RBM19	99	58.756	Microcebus_murinus
ENSORLG00000008077	rbm19	99	74.426	ENSMMOG00000017839	rbm19	99	74.652	Mola_mola
ENSORLG00000008077	rbm19	99	59.957	ENSMODG00000003597	RBM19	99	58.867	Monodelphis_domestica
ENSORLG00000008077	rbm19	100	77.419	ENSMALG00000012647	rbm19	100	78.172	Monopterus_albus
ENSORLG00000008077	rbm19	99	58.661	MGP_CAROLIEiJ_G0027656	Rbm19	99	58.316	Mus_caroli
ENSORLG00000008077	rbm19	99	58.342	ENSMUSG00000029594	Rbm19	99	57.676	Mus_musculus
ENSORLG00000008077	rbm19	99	58.698	MGP_PahariEiJ_G0024238	Rbm19	99	58.455	Mus_pahari
ENSORLG00000008077	rbm19	99	58.635	MGP_SPRETEiJ_G0028656	Rbm19	99	58.359	Mus_spretus
ENSORLG00000008077	rbm19	99	57.487	ENSMPUG00000002694	RBM19	98	56.704	Mustela_putorius_furo
ENSORLG00000008077	rbm19	99	58.402	ENSMLUG00000015075	RBM19	99	57.900	Myotis_lucifugus
ENSORLG00000008077	rbm19	99	57.415	ENSNGAG00000009076	Rbm19	99	57.752	Nannospalax_galili
ENSORLG00000008077	rbm19	99	78.579	ENSNBRG00000005913	rbm19	100	77.478	Neolamprologus_brichardi
ENSORLG00000008077	rbm19	99	59.326	ENSNLEG00000000190	RBM19	99	58.738	Nomascus_leucogenys
ENSORLG00000008077	rbm19	95	60.000	ENSMEUG00000004045	RBM19	91	58.696	Notamacropus_eugenii
ENSORLG00000008077	rbm19	99	58.245	ENSOPRG00000012064	RBM19	99	58.428	Ochotona_princeps
ENSORLG00000008077	rbm19	99	58.178	ENSODEG00000012977	RBM19	99	57.618	Octodon_degus
ENSORLG00000008077	rbm19	99	77.030	ENSONIG00000013576	rbm19	100	80.556	Oreochromis_niloticus
ENSORLG00000008077	rbm19	99	58.395	ENSOCUG00000009398	RBM19	99	57.529	Oryctolagus_cuniculus
ENSORLG00000008077	rbm19	100	97.574	ENSORLG00020013187	rbm19	100	97.654	Oryzias_latipes_hni
ENSORLG00000008077	rbm19	100	98.380	ENSORLG00015001774	rbm19	100	98.380	Oryzias_latipes_hsok
ENSORLG00000008077	rbm19	100	90.420	ENSOMEG00000003334	rbm19	100	90.312	Oryzias_melastigma
ENSORLG00000008077	rbm19	91	55.795	ENSOGAG00000000602	RBM19	100	56.200	Otolemur_garnettii
ENSORLG00000008077	rbm19	99	58.591	ENSOARG00000006827	RBM19	99	58.420	Ovis_aries
ENSORLG00000008077	rbm19	99	58.780	ENSPPAG00000043712	RBM19	99	58.161	Pan_paniscus
ENSORLG00000008077	rbm19	99	58.289	ENSPPRG00000023027	RBM19	98	58.118	Panthera_pardus
ENSORLG00000008077	rbm19	99	54.410	ENSPTIG00000011096	RBM19	99	53.838	Panthera_tigris_altaica
ENSORLG00000008077	rbm19	99	58.780	ENSPTRG00000005494	RBM19	99	58.161	Pan_troglodytes
ENSORLG00000008077	rbm19	99	58.755	ENSPANG00000004795	RBM19	95	60.458	Papio_anubis
ENSORLG00000008077	rbm19	99	66.372	ENSPKIG00000017095	rbm19	99	65.011	Paramormyrops_kingsleyae
ENSORLG00000008077	rbm19	91	56.236	ENSPSIG00000008191	RBM19	99	57.405	Pelodiscus_sinensis
ENSORLG00000008077	rbm19	88	77.850	ENSPMGG00000019087	rbm19	99	77.060	Periophthalmus_magnuspinnatus
ENSORLG00000008077	rbm19	99	58.767	ENSPEMG00000018058	Rbm19	99	57.933	Peromyscus_maniculatus_bairdii
ENSORLG00000008077	rbm19	100	58.256	ENSPCIG00000028861	RBM19	99	57.878	Phascolarctos_cinereus
ENSORLG00000008077	rbm19	100	77.478	ENSPFOG00000015300	rbm19	100	77.706	Poecilia_formosa
ENSORLG00000008077	rbm19	100	77.718	ENSPLAG00000000059	rbm19	100	78.242	Poecilia_latipinna
ENSORLG00000008077	rbm19	99	78.865	ENSPMEG00000018585	rbm19	100	78.495	Poecilia_mexicana
ENSORLG00000008077	rbm19	99	79.134	ENSPREG00000000978	rbm19	100	78.364	Poecilia_reticulata
ENSORLG00000008077	rbm19	99	57.518	ENSPPYG00000004993	RBM19	99	57.291	Pongo_abelii
ENSORLG00000008077	rbm19	71	66.502	ENSPCAG00000005063	-	58	64.574	Procavia_capensis
ENSORLG00000008077	rbm19	99	58.606	ENSPCOG00000016190	RBM19	99	58.221	Propithecus_coquereli
ENSORLG00000008077	rbm19	99	56.413	ENSPVAG00000011618	RBM19	99	56.486	Pteropus_vampyrus
ENSORLG00000008077	rbm19	100	77.186	ENSPNYG00000017434	rbm19	100	77.152	Pundamilia_nyererei
ENSORLG00000008077	rbm19	99	65.622	ENSPNAG00000012069	rbm19	99	65.011	Pygocentrus_nattereri
ENSORLG00000008077	rbm19	99	58.742	ENSRNOG00000001397	Rbm19	99	58.351	Rattus_norvegicus
ENSORLG00000008077	rbm19	99	58.879	ENSRBIG00000041419	RBM19	99	57.557	Rhinopithecus_bieti
ENSORLG00000008077	rbm19	99	58.668	ENSRROG00000031938	RBM19	99	58.282	Rhinopithecus_roxellana
ENSORLG00000008077	rbm19	96	38.447	YPR112C	-	81	37.477	Saccharomyces_cerevisiae
ENSORLG00000008077	rbm19	90	52.588	ENSSBOG00000022679	-	99	51.602	Saimiri_boliviensis_boliviensis
ENSORLG00000008077	rbm19	99	56.962	ENSSBOG00000021434	-	99	57.128	Saimiri_boliviensis_boliviensis
ENSORLG00000008077	rbm19	99	58.190	ENSSHAG00000012256	RBM19	99	58.473	Sarcophilus_harrisii
ENSORLG00000008077	rbm19	99	62.527	ENSSFOG00015005124	rbm19	99	61.693	Scleropages_formosus
ENSORLG00000008077	rbm19	100	78.442	ENSSMAG00000011828	rbm19	100	78.655	Scophthalmus_maximus
ENSORLG00000008077	rbm19	100	81.230	ENSSDUG00000013544	rbm19	100	81.681	Seriola_dumerili
ENSORLG00000008077	rbm19	89	82.028	ENSSLDG00000025413	rbm19	95	82.181	Seriola_lalandi_dorsalis
ENSORLG00000008077	rbm19	63	68.293	ENSSPUG00000011064	RBM19	100	67.354	Sphenodon_punctatus
ENSORLG00000008077	rbm19	99	76.128	ENSSPAG00000018685	rbm19	99	76.509	Stegastes_partitus
ENSORLG00000008077	rbm19	99	59.871	ENSSSCG00000009868	RBM19	99	59.664	Sus_scrofa
ENSORLG00000008077	rbm19	99	59.168	ENSTGUG00000009017	RBM19	99	58.498	Taeniopygia_guttata
ENSORLG00000008077	rbm19	99	75.381	ENSTRUG00000016032	rbm19	99	74.760	Takifugu_rubripes
ENSORLG00000008077	rbm19	72	80.328	ENSTBEG00000000703	RBM19	69	80.328	Tupaia_belangeri
ENSORLG00000008077	rbm19	82	60.870	ENSTTRG00000003987	RBM19	84	60.135	Tursiops_truncatus
ENSORLG00000008077	rbm19	99	57.463	ENSUAMG00000002076	RBM19	98	57.785	Ursus_americanus
ENSORLG00000008077	rbm19	99	58.000	ENSUMAG00000010816	RBM19	99	58.204	Ursus_maritimus
ENSORLG00000008077	rbm19	99	58.657	ENSVVUG00000007886	RBM19	98	58.256	Vulpes_vulpes
ENSORLG00000008077	rbm19	99	58.082	ENSXETG00000017668	rbm19	100	56.663	Xenopus_tropicalis
ENSORLG00000008077	rbm19	100	75.106	ENSXCOG00000016995	rbm19	100	75.370	Xiphophorus_couchianus
ENSORLG00000008077	rbm19	99	79.070	ENSXMAG00000007641	rbm19	100	78.004	Xiphophorus_maculatus