EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008106 (Gene tree)
Gene ID: 101161950
Gene Symbol: frg1
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 11187 bases
Position: chr1:19970331-19981517
Accession: 101161950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010174	FRG1	PF06229.12	4.9e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000010175	-	2964	XM_023957990	ENSORLP00000010174	274 (aa)	XP_023813758	H2LVP1

Gene Model

Click here to download ENSORLG00000008106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008106's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008106	frg1	89	69.636	ENSG00000109536	FRG1	100	79.310	Homo_sapiens
ENSORLG00000008106	frg1	89	83.607	ENSAPOG00000001060	frg1	96	83.607	Acanthochromis_polyacanthus
ENSORLG00000008106	frg1	89	69.231	ENSAMEG00000013503	FRG1	96	69.231	Ailuropoda_melanoleuca
ENSORLG00000008106	frg1	77	84.360	ENSACIG00000022283	frg1	95	84.360	Amphilophus_citrinellus
ENSORLG00000008106	frg1	77	84.434	ENSAOCG00000024240	frg1	83	84.434	Amphiprion_ocellaris
ENSORLG00000008106	frg1	89	83.607	ENSAPEG00000002486	frg1	96	83.607	Amphiprion_percula
ENSORLG00000008106	frg1	89	82.787	ENSATEG00000010414	frg1	96	82.787	Anabas_testudineus
ENSORLG00000008106	frg1	89	69.796	ENSAPLG00000007785	-	96	68.980	Anas_platyrhynchos
ENSORLG00000008106	frg1	89	72.245	ENSACAG00000006877	-	96	72.245	Anolis_carolinensis
ENSORLG00000008106	frg1	89	70.732	ENSANAG00000020876	FRG1	96	70.325	Aotus_nancymaae
ENSORLG00000008106	frg1	89	76.639	ENSACLG00000027065	frg1	95	75.820	Astatotilapia_calliptera
ENSORLG00000008106	frg1	89	81.224	ENSAMXG00000032700	frg1	96	81.224	Astyanax_mexicanus
ENSORLG00000008106	frg1	89	69.231	ENSBTAG00000007089	FRG1	96	69.231	Bos_taurus
ENSORLG00000008106	frg1	75	39.462	WBGene00014177	frg-1	81	39.462	Caenorhabditis_elegans
ENSORLG00000008106	frg1	89	70.732	ENSCJAG00000011272	FRG1	100	70.325	Callithrix_jacchus
ENSORLG00000008106	frg1	89	69.231	ENSCAFG00000007135	FRG1	96	69.231	Canis_familiaris
ENSORLG00000008106	frg1	73	73.632	ENSCAFG00020000082	-	80	73.632	Canis_lupus_dingo
ENSORLG00000008106	frg1	89	69.231	ENSCHIG00000011585	-	96	69.231	Capra_hircus
ENSORLG00000008106	frg1	88	49.793	ENSTSYG00000031599	-	95	50.207	Carlito_syrichta
ENSORLG00000008106	frg1	77	71.226	ENSCAPG00000016056	-	87	71.226	Cavia_aperea
ENSORLG00000008106	frg1	89	69.512	ENSCPOG00000022277	-	96	69.106	Cavia_porcellus
ENSORLG00000008106	frg1	89	70.732	ENSCCAG00000024627	FRG1	96	70.325	Cebus_capucinus
ENSORLG00000008106	frg1	89	69.231	ENSCATG00000029230	FRG1	96	69.231	Cercocebus_atys
ENSORLG00000008106	frg1	89	48.571	ENSCLAG00000009263	-	96	48.571	Chinchilla_lanigera
ENSORLG00000008106	frg1	89	58.800	ENSCLAG00000004960	-	99	58.800	Chinchilla_lanigera
ENSORLG00000008106	frg1	89	69.512	ENSCLAG00000000370	-	96	69.512	Chinchilla_lanigera
ENSORLG00000008106	frg1	89	50.000	ENSCLAG00000006068	-	95	49.590	Chinchilla_lanigera
ENSORLG00000008106	frg1	89	69.231	ENSCSAG00000002899	FRG1	96	69.231	Chlorocebus_sabaeus
ENSORLG00000008106	frg1	73	70.647	ENSCSAG00000017729	-	93	70.647	Chlorocebus_sabaeus
ENSORLG00000008106	frg1	76	73.206	ENSCPBG00000009211	-	81	73.206	Chrysemys_picta_bellii
ENSORLG00000008106	frg1	89	47.471	ENSCING00000005161	-	96	48.638	Ciona_intestinalis
ENSORLG00000008106	frg1	63	47.541	ENSCSAVG00000008018	-	100	48.087	Ciona_savignyi
ENSORLG00000008106	frg1	89	69.231	ENSCANG00000020991	FRG1	96	69.231	Colobus_angolensis_palliatus
ENSORLG00000008106	frg1	89	69.636	ENSCGRG00001014998	Frg1	99	70.046	Cricetulus_griseus_chok1gshd
ENSORLG00000008106	frg1	89	55.691	ENSCGRG00000003902	-	91	56.504	Cricetulus_griseus_crigri
ENSORLG00000008106	frg1	89	69.636	ENSCGRG00000011860	-	96	69.636	Cricetulus_griseus_crigri
ENSORLG00000008106	frg1	89	79.098	ENSCSEG00000015950	frg1	100	79.098	Cynoglossus_semilaevis
ENSORLG00000008106	frg1	89	82.377	ENSCVAG00000009985	frg1	96	82.377	Cyprinodon_variegatus
ENSORLG00000008106	frg1	89	82.787	ENSDARG00000056504	frg1	93	85.821	Danio_rerio
ENSORLG00000008106	frg1	89	68.421	ENSDNOG00000014886	FRG1	96	68.421	Dasypus_novemcinctus
ENSORLG00000008106	frg1	89	61.134	ENSDORG00000016190	Frg1	95	61.538	Dipodomys_ordii
ENSORLG00000008106	frg1	89	44.841	FBgn0036964	FRG1	96	44.841	Drosophila_melanogaster
ENSORLG00000008106	frg1	89	68.016	ENSETEG00000012349	-	96	68.016	Echinops_telfairi
ENSORLG00000008106	frg1	89	68.699	ENSEASG00005017497	FRG1	96	69.512	Equus_asinus_asinus
ENSORLG00000008106	frg1	89	68.699	ENSECAG00000003122	FRG1	96	69.512	Equus_caballus
ENSORLG00000008106	frg1	57	73.885	ENSEEUG00000000145	-	100	73.885	Erinaceus_europaeus
ENSORLG00000008106	frg1	89	80.738	ENSELUG00000021712	frg1	96	80.738	Esox_lucius
ENSORLG00000008106	frg1	89	69.231	ENSFCAG00000025737	FRG1	96	69.231	Felis_catus
ENSORLG00000008106	frg1	77	70.616	ENSFALG00000011231	-	83	70.616	Ficedula_albicollis
ENSORLG00000008106	frg1	89	58.635	ENSFDAG00000012697	-	98	65.421	Fukomys_damarensis
ENSORLG00000008106	frg1	89	69.919	ENSFDAG00000000962	-	96	69.919	Fukomys_damarensis
ENSORLG00000008106	frg1	89	82.377	ENSFHEG00000010540	frg1	96	82.377	Fundulus_heteroclitus
ENSORLG00000008106	frg1	89	79.508	ENSGMOG00000000867	frg1	96	79.508	Gadus_morhua
ENSORLG00000008106	frg1	89	69.796	ENSGALG00000013590	-	96	70.204	Gallus_gallus
ENSORLG00000008106	frg1	76	78.261	ENSGAFG00000013855	frg1	100	78.261	Gambusia_affinis
ENSORLG00000008106	frg1	89	82.041	ENSGACG00000016888	frg1	96	82.041	Gasterosteus_aculeatus
ENSORLG00000008106	frg1	89	71.020	ENSGAGG00000025012	-	96	71.020	Gopherus_agassizii
ENSORLG00000008106	frg1	62	69.591	ENSGGOG00000012888	-	86	69.591	Gorilla_gorilla
ENSORLG00000008106	frg1	89	42.063	ENSGGOG00000040796	-	95	42.063	Gorilla_gorilla
ENSORLG00000008106	frg1	89	82.787	ENSHBUG00000010667	frg1	96	82.787	Haplochromis_burtoni
ENSORLG00000008106	frg1	89	69.919	ENSHGLG00000005601	FRG1	96	69.512	Heterocephalus_glaber_female
ENSORLG00000008106	frg1	89	67.073	ENSHGLG00000020402	-	90	66.667	Heterocephalus_glaber_female
ENSORLG00000008106	frg1	89	65.447	ENSHGLG00000020943	-	96	65.041	Heterocephalus_glaber_female
ENSORLG00000008106	frg1	89	57.959	ENSHGLG00000001211	-	95	58.300	Heterocephalus_glaber_female
ENSORLG00000008106	frg1	89	70.325	ENSHGLG00100016261	-	96	69.919	Heterocephalus_glaber_male
ENSORLG00000008106	frg1	89	56.735	ENSHGLG00100015285	-	95	55.510	Heterocephalus_glaber_male
ENSORLG00000008106	frg1	89	65.447	ENSHGLG00100021211	-	96	65.041	Heterocephalus_glaber_male
ENSORLG00000008106	frg1	89	58.367	ENSHGLG00100010674	-	95	58.704	Heterocephalus_glaber_male
ENSORLG00000008106	frg1	78	83.178	ENSHCOG00000000224	frg1	91	83.178	Hippocampus_comes
ENSORLG00000008106	frg1	89	78.862	ENSIPUG00000022716	frg1	96	77.236	Ictalurus_punctatus
ENSORLG00000008106	frg1	89	69.636	ENSSTOG00000002857	-	96	69.636	Ictidomys_tridecemlineatus
ENSORLG00000008106	frg1	89	69.231	ENSJJAG00000020625	Frg1	96	69.231	Jaculus_jaculus
ENSORLG00000008106	frg1	89	81.148	ENSKMAG00000005841	frg1	96	81.148	Kryptolebias_marmoratus
ENSORLG00000008106	frg1	89	82.787	ENSLBEG00000001466	frg1	96	82.787	Labrus_bergylta
ENSORLG00000008106	frg1	82	63.158	ENSLACG00000010243	frg1	87	63.158	Latimeria_chalumnae
ENSORLG00000008106	frg1	89	75.820	ENSLOCG00000013868	frg1	96	75.820	Lepisosteus_oculatus
ENSORLG00000008106	frg1	89	68.421	ENSLAFG00000011191	FRG1	100	65.946	Loxodonta_africana
ENSORLG00000008106	frg1	73	64.039	ENSMFAG00000042873	-	84	64.039	Macaca_fascicularis
ENSORLG00000008106	frg1	89	69.231	ENSMFAG00000031178	FRG1	96	69.231	Macaca_fascicularis
ENSORLG00000008106	frg1	89	69.231	ENSMMUG00000001824	FRG1	96	69.231	Macaca_mulatta
ENSORLG00000008106	frg1	73	64.532	ENSMMUG00000047496	-	87	64.532	Macaca_mulatta
ENSORLG00000008106	frg1	89	64.777	ENSMNEG00000018620	FRG1	100	64.777	Macaca_nemestrina
ENSORLG00000008106	frg1	89	69.231	ENSMLEG00000028881	FRG1	96	69.231	Mandrillus_leucophaeus
ENSORLG00000008106	frg1	91	82.661	ENSMAMG00000012406	frg1	96	83.607	Mastacembelus_armatus
ENSORLG00000008106	frg1	89	82.377	ENSMZEG00005007549	frg1	96	82.377	Maylandia_zebra
ENSORLG00000008106	frg1	89	69.796	ENSMGAG00000011481	-	96	70.204	Meleagris_gallopavo
ENSORLG00000008106	frg1	89	69.231	ENSMAUG00000000847	Frg1	96	69.231	Mesocricetus_auratus
ENSORLG00000008106	frg1	89	69.231	ENSMICG00000046816	FRG1	96	69.231	Microcebus_murinus
ENSORLG00000008106	frg1	89	62.195	ENSMOCG00000023000	Frg1	95	62.195	Microtus_ochrogaster
ENSORLG00000008106	frg1	78	80.751	ENSMMOG00000004008	frg1	91	80.751	Mola_mola
ENSORLG00000008106	frg1	89	68.421	ENSMODG00000019031	-	84	68.826	Monodelphis_domestica
ENSORLG00000008106	frg1	89	83.197	ENSMALG00000018497	frg1	96	83.197	Monopterus_albus
ENSORLG00000008106	frg1	89	68.826	MGP_CAROLIEiJ_G0031006	Frg1	96	68.826	Mus_caroli
ENSORLG00000008106	frg1	89	68.826	ENSMUSG00000031590	Frg1	96	68.826	Mus_musculus
ENSORLG00000008106	frg1	89	69.231	MGP_PahariEiJ_G0021475	Frg1	96	69.231	Mus_pahari
ENSORLG00000008106	frg1	89	68.421	MGP_SPRETEiJ_G0032120	Frg1	96	68.421	Mus_spretus
ENSORLG00000008106	frg1	89	69.231	ENSMPUG00000017962	FRG1	96	69.231	Mustela_putorius_furo
ENSORLG00000008106	frg1	89	69.512	ENSMLUG00000023179	FRG1	96	69.512	Myotis_lucifugus
ENSORLG00000008106	frg1	89	68.826	ENSNGAG00000016411	Frg1	96	68.826	Nannospalax_galili
ENSORLG00000008106	frg1	76	74.879	ENSNBRG00000006806	frg1	95	74.879	Neolamprologus_brichardi
ENSORLG00000008106	frg1	73	65.672	ENSNLEG00000036059	-	86	65.672	Nomascus_leucogenys
ENSORLG00000008106	frg1	86	63.598	ENSNLEG00000035849	-	99	58.678	Nomascus_leucogenys
ENSORLG00000008106	frg1	89	68.293	ENSNLEG00000000930	FRG1	100	66.667	Nomascus_leucogenys
ENSORLG00000008106	frg1	73	64.677	ENSNLEG00000028874	-	91	64.677	Nomascus_leucogenys
ENSORLG00000008106	frg1	89	58.943	ENSNLEG00000032333	-	95	58.943	Nomascus_leucogenys
ENSORLG00000008106	frg1	89	48.571	ENSNLEG00000032846	-	90	60.396	Nomascus_leucogenys
ENSORLG00000008106	frg1	51	70.213	ENSMEUG00000007509	-	54	70.213	Notamacropus_eugenii
ENSORLG00000008106	frg1	76	68.571	ENSOPRG00000004722	-	81	68.571	Ochotona_princeps
ENSORLG00000008106	frg1	89	52.245	ENSODEG00000006953	-	86	58.586	Octodon_degus
ENSORLG00000008106	frg1	89	69.512	ENSODEG00000006458	-	96	69.512	Octodon_degus
ENSORLG00000008106	frg1	91	82.258	ENSONIG00000010162	frg1	97	82.258	Oreochromis_niloticus
ENSORLG00000008106	frg1	67	66.667	ENSOANG00000005659	-	81	66.667	Ornithorhynchus_anatinus
ENSORLG00000008106	frg1	89	68.421	ENSOCUG00000009038	-	96	68.421	Oryctolagus_cuniculus
ENSORLG00000008106	frg1	100	99.270	ENSORLG00020014355	frg1	100	99.270	Oryzias_latipes_hni
ENSORLG00000008106	frg1	89	99.180	ENSORLG00015014159	frg1	96	99.180	Oryzias_latipes_hsok
ENSORLG00000008106	frg1	79	91.667	ENSOMEG00000002468	frg1	89	91.667	Oryzias_melastigma
ENSORLG00000008106	frg1	89	68.826	ENSOGAG00000005749	-	96	68.826	Otolemur_garnettii
ENSORLG00000008106	frg1	89	68.293	ENSOARG00000008592	FRG1	94	68.293	Ovis_aries
ENSORLG00000008106	frg1	89	51.163	ENSPPAG00000043174	-	100	51.575	Pan_paniscus
ENSORLG00000008106	frg1	78	69.907	ENSPPAG00000043170	-	100	69.907	Pan_paniscus
ENSORLG00000008106	frg1	89	68.826	ENSPPRG00000025003	-	96	68.826	Panthera_pardus
ENSORLG00000008106	frg1	89	67.886	ENSPPRG00000019777	-	96	67.480	Panthera_pardus
ENSORLG00000008106	frg1	89	68.293	ENSPTIG00000006566	-	96	67.886	Panthera_tigris_altaica
ENSORLG00000008106	frg1	89	68.826	ENSPTIG00000006588	-	96	68.826	Panthera_tigris_altaica
ENSORLG00000008106	frg1	89	57.895	ENSPTRG00000044710	-	100	57.895	Pan_troglodytes
ENSORLG00000008106	frg1	89	69.636	ENSPTRG00000016671	-	96	69.636	Pan_troglodytes
ENSORLG00000008106	frg1	89	69.636	ENSPTRG00000050205	-	96	69.636	Pan_troglodytes
ENSORLG00000008106	frg1	82	60.173	ENSPTRG00000043123	-	94	59.740	Pan_troglodytes
ENSORLG00000008106	frg1	88	58.197	ENSPTRG00000052363	-	95	63.725	Pan_troglodytes
ENSORLG00000008106	frg1	89	56.680	ENSPTRG00000050204	-	100	56.680	Pan_troglodytes
ENSORLG00000008106	frg1	65	65.556	ENSPANG00000031530	-	84	63.687	Papio_anubis
ENSORLG00000008106	frg1	89	73.061	ENSPKIG00000024189	frg1	96	73.061	Paramormyrops_kingsleyae
ENSORLG00000008106	frg1	74	74.020	ENSPSIG00000017971	-	78	74.020	Pelodiscus_sinensis
ENSORLG00000008106	frg1	91	75.697	ENSPMGG00000019273	frg1	99	75.403	Periophthalmus_magnuspinnatus
ENSORLG00000008106	frg1	89	69.231	ENSPEMG00000000650	Frg1	96	69.231	Peromyscus_maniculatus_bairdii
ENSORLG00000008106	frg1	89	68.826	ENSPCIG00000007530	-	66	68.826	Phascolarctos_cinereus
ENSORLG00000008106	frg1	89	81.967	ENSPFOG00000006721	frg1	96	81.967	Poecilia_formosa
ENSORLG00000008106	frg1	89	81.967	ENSPMEG00000013816	frg1	96	81.967	Poecilia_mexicana
ENSORLG00000008106	frg1	91	81.124	ENSPREG00000000097	frg1	96	81.967	Poecilia_reticulata
ENSORLG00000008106	frg1	53	75.172	ENSPPYG00000029810	-	100	75.172	Pongo_abelii
ENSORLG00000008106	frg1	58	68.987	ENSPPYG00000011275	-	87	68.553	Pongo_abelii
ENSORLG00000008106	frg1	89	66.667	ENSPCAG00000014953	-	100	66.667	Procavia_capensis
ENSORLG00000008106	frg1	73	56.863	ENSPCOG00000022726	FRG1	95	56.863	Propithecus_coquereli
ENSORLG00000008106	frg1	89	55.870	ENSPVAG00000010551	FRG1	96	55.870	Pteropus_vampyrus
ENSORLG00000008106	frg1	59	82.716	ENSPNYG00000015209	frg1	72	80.357	Pundamilia_nyererei
ENSORLG00000008106	frg1	89	75.304	ENSPNAG00000013259	frg1	95	74.194	Pygocentrus_nattereri
ENSORLG00000008106	frg1	89	68.826	ENSRNOG00000009846	Frg1	96	68.826	Rattus_norvegicus
ENSORLG00000008106	frg1	82	67.686	ENSRBIG00000042219	-	96	67.686	Rhinopithecus_bieti
ENSORLG00000008106	frg1	73	67.000	ENSRROG00000032084	-	90	61.000	Rhinopithecus_roxellana
ENSORLG00000008106	frg1	89	67.206	ENSRROG00000015523	FRG1	96	67.206	Rhinopithecus_roxellana
ENSORLG00000008106	frg1	89	71.138	ENSSBOG00000034175	FRG1	96	70.732	Saimiri_boliviensis_boliviensis
ENSORLG00000008106	frg1	89	68.016	ENSSHAG00000005886	-	96	68.016	Sarcophilus_harrisii
ENSORLG00000008106	frg1	89	77.642	ENSSFOG00015021361	frg1	98	77.642	Scleropages_formosus
ENSORLG00000008106	frg1	89	82.787	ENSSMAG00000001213	frg1	96	82.787	Scophthalmus_maximus
ENSORLG00000008106	frg1	89	82.787	ENSSDUG00000018886	frg1	96	82.787	Seriola_dumerili
ENSORLG00000008106	frg1	89	82.787	ENSSLDG00000024191	frg1	96	82.787	Seriola_lalandi_dorsalis
ENSORLG00000008106	frg1	61	73.214	ENSSARG00000002471	-	93	71.264	Sorex_araneus
ENSORLG00000008106	frg1	89	68.443	ENSSPUG00000017326	-	96	71.635	Sphenodon_punctatus
ENSORLG00000008106	frg1	89	76.230	ENSSPAG00000013294	frg1	96	76.230	Stegastes_partitus
ENSORLG00000008106	frg1	89	69.636	ENSSSCG00000006996	FRG1	96	69.636	Sus_scrofa
ENSORLG00000008106	frg1	89	70.204	ENSTGUG00000007028	-	96	69.796	Taeniopygia_guttata
ENSORLG00000008106	frg1	89	79.508	ENSTRUG00000016208	frg1	96	79.508	Takifugu_rubripes
ENSORLG00000008106	frg1	89	81.557	ENSTNIG00000007128	frg1	96	81.557	Tetraodon_nigroviridis
ENSORLG00000008106	frg1	73	51.000	ENSTBEG00000012789	-	94	51.000	Tupaia_belangeri
ENSORLG00000008106	frg1	72	46.970	ENSTBEG00000017605	-	99	46.970	Tupaia_belangeri
ENSORLG00000008106	frg1	89	68.016	ENSTBEG00000014491	-	96	68.016	Tupaia_belangeri
ENSORLG00000008106	frg1	89	68.826	ENSTTRG00000003429	FRG1	96	68.826	Tursiops_truncatus
ENSORLG00000008106	frg1	89	67.073	ENSUAMG00000012123	-	100	66.122	Ursus_americanus
ENSORLG00000008106	frg1	89	69.231	ENSUMAG00000021119	FRG1	96	69.231	Ursus_maritimus
ENSORLG00000008106	frg1	77	71.226	ENSVPAG00000011977	-	89	71.226	Vicugna_pacos
ENSORLG00000008106	frg1	89	66.802	ENSVPAG00000000616	FRG1	96	66.802	Vicugna_pacos
ENSORLG00000008106	frg1	73	73.632	ENSVVUG00000007181	-	73	73.632	Vulpes_vulpes
ENSORLG00000008106	frg1	89	71.020	ENSXETG00000012470	frg1	96	71.020	Xenopus_tropicalis
ENSORLG00000008106	frg1	89	76.230	ENSXCOG00000005312	frg1	96	76.230	Xiphophorus_couchianus
ENSORLG00000008106	frg1	89	80.738	ENSXMAG00000007751	frg1	96	80.738	Xiphophorus_maculatus