EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008110 (Gene tree)
Gene ID: 100049173
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 9893 bases
Position: chr6:17782258-17792150
Accession: 100049173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010178	HRDC	PF00570.23	5.6e-15	1	1
ENSORLP00000027048	HRDC	PF00570.23	5.7e-15	1	1
ENSORLP00000010178	BDHCT	PF08072.11	2.1e-19	1	1
ENSORLP00000027048	BDHCT	PF08072.11	2.1e-19	1	1
ENSORLP00000010178	DEAD	PF00270.29	3.1e-17	1	1
ENSORLP00000027048	DEAD	PF00270.29	3.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000031161	-	4544	-	ENSORLP00000027048	1393 (aa)	-	-
ENSORLT00000010179	-	4360	XM_023955368	ENSORLP00000010178	1363 (aa)	XP_023811136	H2LVP4

Gene Model

Click here to download ENSORLG00000008110's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03440	Homologous recombination	KEGG
ola03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008110's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008110	blm	61	66.371	ENSG00000197299	BLM	82	69.505	Homo_sapiens
ENSORLG00000008110	blm	100	72.823	ENSAPOG00000017966	blm	100	73.666	Acanthochromis_polyacanthus
ENSORLG00000008110	blm	57	65.179	ENSAMEG00000013843	BLM	55	65.179	Ailuropoda_melanoleuca
ENSORLG00000008110	blm	100	73.126	ENSACIG00000023762	blm	100	72.984	Amphilophus_citrinellus
ENSORLG00000008110	blm	100	72.590	ENSAOCG00000003318	blm	100	73.582	Amphiprion_ocellaris
ENSORLG00000008110	blm	100	72.324	ENSAPEG00000018105	blm	100	73.296	Amphiprion_percula
ENSORLG00000008110	blm	99	73.296	ENSATEG00000006421	blm	100	73.347	Anabas_testudineus
ENSORLG00000008110	blm	81	53.035	ENSAPLG00000006878	BLM	97	52.876	Anas_platyrhynchos
ENSORLG00000008110	blm	60	67.050	ENSACAG00000014275	BLM	65	66.752	Anolis_carolinensis
ENSORLG00000008110	blm	57	66.624	ENSANAG00000038415	BLM	69	73.770	Aotus_nancymaae
ENSORLG00000008110	blm	100	73.126	ENSACLG00000020354	blm	100	73.197	Astatotilapia_calliptera
ENSORLG00000008110	blm	99	57.509	ENSAMXG00000016970	blm	99	58.828	Astyanax_mexicanus
ENSORLG00000008110	blm	80	72.897	ENSBTAG00000020301	BLM	86	72.897	Bos_taurus
ENSORLG00000008110	blm	57	67.263	ENSCJAG00000009803	BLM	60	73.975	Callithrix_jacchus
ENSORLG00000008110	blm	85	65.311	ENSCAFG00000012385	BLM	85	65.522	Canis_familiaris
ENSORLG00000008110	blm	85	65.311	ENSCAFG00020016111	BLM	87	68.006	Canis_lupus_dingo
ENSORLG00000008110	blm	80	72.897	ENSCHIG00000010329	BLM	86	72.897	Capra_hircus
ENSORLG00000008110	blm	57	65.779	ENSTSYG00000012368	BLM	51	72.541	Carlito_syrichta
ENSORLG00000008110	blm	77	69.913	ENSCAPG00000017976	BLM	70	69.913	Cavia_aperea
ENSORLG00000008110	blm	99	46.426	ENSCPOG00000001761	BLM	99	46.217	Cavia_porcellus
ENSORLG00000008110	blm	60	66.496	ENSCCAG00000023069	BLM	65	73.770	Cebus_capucinus
ENSORLG00000008110	blm	60	66.285	ENSCATG00000040609	BLM	83	73.770	Cercocebus_atys
ENSORLG00000008110	blm	57	66.794	ENSCLAG00000012111	BLM	55	66.667	Chinchilla_lanigera
ENSORLG00000008110	blm	64	66.284	ENSCSAG00000017040	BLM	64	66.497	Chlorocebus_sabaeus
ENSORLG00000008110	blm	76	59.722	ENSCHOG00000006255	BLM	50	59.722	Choloepus_hoffmanni
ENSORLG00000008110	blm	76	56.144	ENSCPBG00000025000	BLM	94	55.313	Chrysemys_picta_bellii
ENSORLG00000008110	blm	53	52.070	ENSCANG00000034808	BLM	81	52.070	Colobus_angolensis_palliatus
ENSORLG00000008110	blm	63	63.952	ENSCGRG00001024897	Blm	88	64.482	Cricetulus_griseus_chok1gshd
ENSORLG00000008110	blm	95	65.889	ENSCSEG00000013483	blm	99	65.038	Cynoglossus_semilaevis
ENSORLG00000008110	blm	76	77.155	ENSCVAG00000017583	blm	99	70.817	Cyprinodon_variegatus
ENSORLG00000008110	blm	99	58.214	ENSDARG00000077089	blm	100	58.203	Danio_rerio
ENSORLG00000008110	blm	57	65.051	ENSDNOG00000010159	BLM	54	65.057	Dasypus_novemcinctus
ENSORLG00000008110	blm	57	39.825	FBgn0002906	Blm	54	39.758	Drosophila_melanogaster
ENSORLG00000008110	blm	58	54.348	ENSETEG00000015019	BLM	56	54.348	Echinops_telfairi
ENSORLG00000008110	blm	71	59.929	ENSEASG00005006727	BLM	72	59.929	Equus_asinus_asinus
ENSORLG00000008110	blm	68	63.409	ENSECAG00000011405	BLM	67	63.409	Equus_caballus
ENSORLG00000008110	blm	57	64.340	ENSEEUG00000001434	BLM	56	64.295	Erinaceus_europaeus
ENSORLG00000008110	blm	99	58.990	ENSELUG00000019098	blm	99	58.744	Esox_lucius
ENSORLG00000008110	blm	64	65.857	ENSFCAG00000006087	BLM	60	73.361	Felis_catus
ENSORLG00000008110	blm	76	54.588	ENSFALG00000010981	BLM	67	63.170	Ficedula_albicollis
ENSORLG00000008110	blm	54	65.753	ENSFDAG00000012658	BLM	77	59.853	Fukomys_damarensis
ENSORLG00000008110	blm	100	73.042	ENSFHEG00000002553	blm	100	73.042	Fundulus_heteroclitus
ENSORLG00000008110	blm	99	60.537	ENSGMOG00000016431	blm	99	69.827	Gadus_morhua
ENSORLG00000008110	blm	96	79.730	ENSGAFG00000001117	blm	99	79.730	Gambusia_affinis
ENSORLG00000008110	blm	99	68.233	ENSGACG00000010863	blm	100	89.773	Gasterosteus_aculeatus
ENSORLG00000008110	blm	55	66.864	ENSGAGG00000005383	BLM	95	55.059	Gopherus_agassizii
ENSORLG00000008110	blm	61	66.497	ENSGGOG00000007710	BLM	83	74.180	Gorilla_gorilla
ENSORLG00000008110	blm	100	73.449	ENSHBUG00000015943	blm	100	73.449	Haplochromis_burtoni
ENSORLG00000008110	blm	63	63.842	ENSHGLG00000013231	BLM	67	63.560	Heterocephalus_glaber_female
ENSORLG00000008110	blm	75	70.154	ENSHCOG00000011455	blm	100	70.374	Hippocampus_comes
ENSORLG00000008110	blm	76	65.616	ENSIPUG00000000529	blm	86	65.138	Ictalurus_punctatus
ENSORLG00000008110	blm	63	65.732	ENSSTOG00000005000	BLM	65	65.689	Ictidomys_tridecemlineatus
ENSORLG00000008110	blm	100	75.036	ENSKMAG00000016608	blm	100	75.108	Kryptolebias_marmoratus
ENSORLG00000008110	blm	61	79.736	ENSLBEG00000018729	blm	97	79.736	Labrus_bergylta
ENSORLG00000008110	blm	60	67.024	ENSLACG00000006490	BLM	74	58.234	Latimeria_chalumnae
ENSORLG00000008110	blm	99	53.540	ENSLOCG00000014302	blm	100	53.567	Lepisosteus_oculatus
ENSORLG00000008110	blm	57	66.539	ENSMFAG00000042982	BLM	83	73.975	Macaca_fascicularis
ENSORLG00000008110	blm	57	66.539	ENSMMUG00000019526	BLM	83	73.975	Macaca_mulatta
ENSORLG00000008110	blm	57	66.412	ENSMNEG00000031251	BLM	75	76.393	Macaca_nemestrina
ENSORLG00000008110	blm	64	62.675	ENSMLEG00000032934	BLM	63	62.883	Mandrillus_leucophaeus
ENSORLG00000008110	blm	99	72.424	ENSMAMG00000008726	blm	99	72.424	Mastacembelus_armatus
ENSORLG00000008110	blm	100	72.238	ENSMZEG00005022323	blm	100	72.521	Maylandia_zebra
ENSORLG00000008110	blm	63	63.528	ENSMAUG00000008953	Blm	68	63.820	Mesocricetus_auratus
ENSORLG00000008110	blm	65	66.158	ENSMICG00000034442	BLM	60	73.361	Microcebus_murinus
ENSORLG00000008110	blm	87	64.320	ENSMOCG00000016367	Blm	87	64.642	Microtus_ochrogaster
ENSORLG00000008110	blm	100	70.521	ENSMMOG00000006959	blm	100	70.521	Mola_mola
ENSORLG00000008110	blm	63	66.164	ENSMODG00000019449	BLM	62	66.624	Monodelphis_domestica
ENSORLG00000008110	blm	100	72.031	ENSMALG00000007323	blm	100	72.175	Monopterus_albus
ENSORLG00000008110	blm	71	62.972	MGP_CAROLIEiJ_G0029907	Blm	88	62.901	Mus_caroli
ENSORLG00000008110	blm	60	63.146	ENSMUSG00000030528	Blm	68	63.077	Mus_musculus
ENSORLG00000008110	blm	63	63.658	MGP_PahariEiJ_G0013129	Blm	62	63.571	Mus_pahari
ENSORLG00000008110	blm	60	63.475	MGP_SPRETEiJ_G0031009	Blm	74	63.290	Mus_spretus
ENSORLG00000008110	blm	80	51.893	ENSMLUG00000014697	BLM	80	51.893	Myotis_lucifugus
ENSORLG00000008110	blm	87	63.234	ENSNGAG00000001275	Blm	70	63.114	Nannospalax_galili
ENSORLG00000008110	blm	100	72.881	ENSNBRG00000019702	blm	100	73.234	Neolamprologus_brichardi
ENSORLG00000008110	blm	60	63.985	ENSNLEG00000012087	BLM	82	70.082	Nomascus_leucogenys
ENSORLG00000008110	blm	67	58.255	ENSMEUG00000007253	BLM	66	58.294	Notamacropus_eugenii
ENSORLG00000008110	blm	53	65.702	ENSOPRG00000011667	BLM	62	65.655	Ochotona_princeps
ENSORLG00000008110	blm	57	61.421	ENSODEG00000015373	BLM	99	51.848	Octodon_degus
ENSORLG00000008110	blm	100	69.220	ENSONIG00000015193	blm	100	69.820	Oreochromis_niloticus
ENSORLG00000008110	blm	56	65.810	ENSOANG00000009316	-	100	65.637	Ornithorhynchus_anatinus
ENSORLG00000008110	blm	85	65.513	ENSOCUG00000013969	BLM	70	65.212	Oryctolagus_cuniculus
ENSORLG00000008110	blm	100	98.492	ENSORLG00020004812	blm	100	98.492	Oryzias_latipes_hni
ENSORLG00000008110	blm	100	98.564	ENSORLG00015018640	blm	100	98.564	Oryzias_latipes_hsok
ENSORLG00000008110	blm	100	90.240	ENSOMEG00000023545	blm	100	90.240	Oryzias_melastigma
ENSORLG00000008110	blm	74	65.128	ENSOGAG00000005708	BLM	71	65.128	Otolemur_garnettii
ENSORLG00000008110	blm	87	63.744	ENSOARG00000012875	BLM	87	63.863	Ovis_aries
ENSORLG00000008110	blm	61	66.117	ENSPPAG00000032173	BLM	83	73.975	Pan_paniscus
ENSORLG00000008110	blm	64	65.729	ENSPPRG00000002471	BLM	60	73.361	Panthera_pardus
ENSORLG00000008110	blm	64	65.090	ENSPTIG00000016168	BLM	59	72.912	Panthera_tigris_altaica
ENSORLG00000008110	blm	61	66.158	ENSPTRG00000007460	BLM	83	73.717	Pan_troglodytes
ENSORLG00000008110	blm	64	66.411	ENSPANG00000018572	BLM	75	76.721	Papio_anubis
ENSORLG00000008110	blm	89	73.964	ENSPKIG00000008954	blm	99	56.042	Paramormyrops_kingsleyae
ENSORLG00000008110	blm	71	69.848	ENSPMGG00000006629	blm	100	70.397	Periophthalmus_magnuspinnatus
ENSORLG00000008110	blm	64	66.624	ENSPEMG00000017348	Blm	64	66.367	Peromyscus_maniculatus_bairdii
ENSORLG00000008110	blm	87	63.986	ENSPCIG00000006609	BLM	68	62.631	Phascolarctos_cinereus
ENSORLG00000008110	blm	100	72.170	ENSPFOG00000005059	blm	100	73.074	Poecilia_formosa
ENSORLG00000008110	blm	100	72.294	ENSPLAG00000017344	blm	100	73.127	Poecilia_latipinna
ENSORLG00000008110	blm	100	72.098	ENSPMEG00000000321	blm	100	73.002	Poecilia_mexicana
ENSORLG00000008110	blm	100	71.449	ENSPREG00000007715	blm	100	72.354	Poecilia_reticulata
ENSORLG00000008110	blm	61	65.102	ENSPPYG00000006784	BLM	70	65.478	Pongo_abelii
ENSORLG00000008110	blm	60	61.374	ENSPCAG00000008960	BLM	59	61.584	Procavia_capensis
ENSORLG00000008110	blm	85	58.089	ENSPCOG00000000439	BLM	68	58.217	Propithecus_coquereli
ENSORLG00000008110	blm	60	76.066	ENSPVAG00000011642	BLM	59	76.066	Pteropus_vampyrus
ENSORLG00000008110	blm	100	65.236	ENSPNYG00000010956	blm	100	65.236	Pundamilia_nyererei
ENSORLG00000008110	blm	100	59.100	ENSPNAG00000011714	blm	100	59.776	Pygocentrus_nattereri
ENSORLG00000008110	blm	88	63.139	ENSRNOG00000011213	Blm	68	63.095	Rattus_norvegicus
ENSORLG00000008110	blm	61	65.987	ENSRBIG00000029656	BLM	76	76.221	Rhinopithecus_bieti
ENSORLG00000008110	blm	65	65.987	ENSRROG00000037871	BLM	83	73.265	Rhinopithecus_roxellana
ENSORLG00000008110	blm	88	63.102	ENSSHAG00000007988	BLM	87	63.201	Sarcophilus_harrisii
ENSORLG00000008110	blm	66	73.703	ENSSFOG00015015462	blm	75	73.703	Scleropages_formosus
ENSORLG00000008110	blm	100	72.115	ENSSMAG00000001120	blm	100	72.330	Scophthalmus_maximus
ENSORLG00000008110	blm	100	72.546	ENSSDUG00000010955	blm	100	72.831	Seriola_dumerili
ENSORLG00000008110	blm	100	72.116	ENSSLDG00000000634	blm	100	72.258	Seriola_lalandi_dorsalis
ENSORLG00000008110	blm	57	60.997	ENSSARG00000006398	BLM	59	60.963	Sorex_araneus
ENSORLG00000008110	blm	76	54.032	ENSSPUG00000000013	BLM	97	52.060	Sphenodon_punctatus
ENSORLG00000008110	blm	99	74.366	ENSSPAG00000013999	blm	99	74.718	Stegastes_partitus
ENSORLG00000008110	blm	66	66.078	ENSSSCG00000001816	BLM	61	69.114	Sus_scrofa
ENSORLG00000008110	blm	70	54.817	ENSTGUG00000009959	-	84	55.180	Taeniopygia_guttata
ENSORLG00000008110	blm	99	68.303	ENSTRUG00000019860	blm	99	68.520	Takifugu_rubripes
ENSORLG00000008110	blm	99	65.106	ENSTNIG00000019246	blm	99	65.652	Tetraodon_nigroviridis
ENSORLG00000008110	blm	65	66.709	ENSTTRG00000016386	BLM	64	66.033	Tursiops_truncatus
ENSORLG00000008110	blm	84	65.434	ENSUMAG00000009105	BLM	95	68.100	Ursus_maritimus
ENSORLG00000008110	blm	86	62.595	ENSVPAG00000000085	BLM	85	62.690	Vicugna_pacos
ENSORLG00000008110	blm	59	77.778	ENSVVUG00000006402	BLM	62	77.778	Vulpes_vulpes
ENSORLG00000008110	blm	99	46.930	ENSXETG00000007847	blm	55	66.794	Xenopus_tropicalis
ENSORLG00000008110	blm	100	70.410	ENSXCOG00000020227	blm	100	71.045	Xiphophorus_couchianus
ENSORLG00000008110	blm	100	72.798	ENSXMAG00000002951	blm	100	72.868	Xiphophorus_maculatus