EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008120 (Gene tree)
Gene ID: 101166978
Gene Symbol: srrt
Alias: -
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 9909 bases
Position: chr14:15810632-15820540
Accession: 101166978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010190	ARS2	PF04959.13	5.1e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000010191	-	2987	XM_011483595	ENSORLP00000010190	870 (aa)	XP_011481897	H2LVQ5

Gene Model

Click here to download ENSORLG00000008120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008120	srrt	52	75.109	ENSG00000087087	SRRT	98	88.710	Homo_sapiens
ENSORLG00000008120	srrt	95	80.427	ENSAPOG00000002304	srrt	98	87.355	Acanthochromis_polyacanthus
ENSORLG00000008120	srrt	52	75.385	ENSAMEG00000014506	SRRT	96	64.335	Ailuropoda_melanoleuca
ENSORLG00000008120	srrt	85	91.387	ENSACIG00000015795	srrt	95	91.966	Amphilophus_citrinellus
ENSORLG00000008120	srrt	93	54.460	ENSAOCG00000009189	-	96	57.343	Amphiprion_ocellaris
ENSORLG00000008120	srrt	84	92.560	ENSAOCG00000009693	srrt	93	92.812	Amphiprion_ocellaris
ENSORLG00000008120	srrt	93	54.460	ENSAPEG00000020016	-	96	57.343	Amphiprion_percula
ENSORLG00000008120	srrt	83	92.341	ENSAPEG00000003646	srrt	97	92.389	Amphiprion_percula
ENSORLG00000008120	srrt	53	62.449	ENSATEG00000003652	-	89	63.934	Anabas_testudineus
ENSORLG00000008120	srrt	95	84.588	ENSATEG00000014425	srrt	98	85.431	Anabas_testudineus
ENSORLG00000008120	srrt	52	75.000	ENSACAG00000001014	SRRT	98	65.057	Anolis_carolinensis
ENSORLG00000008120	srrt	52	73.978	ENSANAG00000031718	SRRT	96	64.821	Aotus_nancymaae
ENSORLG00000008120	srrt	53	65.190	ENSACLG00000009423	-	96	55.465	Astatotilapia_calliptera
ENSORLG00000008120	srrt	95	84.468	ENSACLG00000013156	srrt	94	87.179	Astatotilapia_calliptera
ENSORLG00000008120	srrt	51	80.134	ENSAMXG00000016671	srrt	95	71.709	Astyanax_mexicanus
ENSORLG00000008120	srrt	52	73.548	ENSBTAG00000001134	SRRT	96	64.516	Bos_taurus
ENSORLG00000008120	srrt	59	44.552	WBGene00017085	E01A2.2	85	43.552	Caenorhabditis_elegans
ENSORLG00000008120	srrt	52	73.978	ENSCJAG00000014917	SRRT	96	65.469	Callithrix_jacchus
ENSORLG00000008120	srrt	96	63.437	ENSCAFG00000023538	SRRT	96	64.261	Canis_familiaris
ENSORLG00000008120	srrt	96	64.014	ENSCAFG00020013358	SRRT	99	62.441	Canis_lupus_dingo
ENSORLG00000008120	srrt	52	74.026	ENSCHIG00000010495	SRRT	96	64.862	Capra_hircus
ENSORLG00000008120	srrt	52	74.242	ENSTSYG00000036426	SRRT	99	63.446	Carlito_syrichta
ENSORLG00000008120	srrt	52	74.945	ENSCAPG00000013586	SRRT	100	65.845	Cavia_aperea
ENSORLG00000008120	srrt	52	73.605	ENSCPOG00000001739	SRRT	96	65.242	Cavia_porcellus
ENSORLG00000008120	srrt	52	73.978	ENSCCAG00000015877	SRRT	96	65.394	Cebus_capucinus
ENSORLG00000008120	srrt	52	74.242	ENSCATG00000036306	SRRT	97	64.598	Cercocebus_atys
ENSORLG00000008120	srrt	52	73.763	ENSCLAG00000007568	SRRT	95	67.807	Chinchilla_lanigera
ENSORLG00000008120	srrt	52	73.978	ENSCSAG00000017996	SRRT	96	65.318	Chlorocebus_sabaeus
ENSORLG00000008120	srrt	51	74.815	ENSCHOG00000007815	SRRT	64	74.265	Choloepus_hoffmanni
ENSORLG00000008120	srrt	69	74.123	ENSCPBG00000011553	SRRT	81	72.000	Chrysemys_picta_bellii
ENSORLG00000008120	srrt	100	42.546	ENSCING00000003506	-	86	44.819	Ciona_intestinalis
ENSORLG00000008120	srrt	100	42.556	ENSCSAVG00000008394	-	81	56.000	Ciona_savignyi
ENSORLG00000008120	srrt	52	74.242	ENSCANG00000034556	SRRT	96	65.429	Colobus_angolensis_palliatus
ENSORLG00000008120	srrt	52	73.763	ENSCGRG00001001594	Srrt	96	65.127	Cricetulus_griseus_chok1gshd
ENSORLG00000008120	srrt	69	82.353	ENSCGRG00000007292	Srrt	95	67.535	Cricetulus_griseus_crigri
ENSORLG00000008120	srrt	52	64.119	ENSCSEG00000005233	-	57	64.050	Cynoglossus_semilaevis
ENSORLG00000008120	srrt	98	72.811	ENSCSEG00000017878	srrt	98	75.230	Cynoglossus_semilaevis
ENSORLG00000008120	srrt	95	84.726	ENSCVAG00000019848	srrt	98	85.448	Cyprinodon_variegatus
ENSORLG00000008120	srrt	96	74.883	ENSDARG00000017762	srrt	98	74.087	Danio_rerio
ENSORLG00000008120	srrt	52	73.978	ENSDNOG00000003851	SRRT	96	64.740	Dasypus_novemcinctus
ENSORLG00000008120	srrt	52	74.403	ENSDORG00000005584	Srrt	95	68.763	Dipodomys_ordii
ENSORLG00000008120	srrt	89	53.348	FBgn0033062	Ars2	68	53.863	Drosophila_melanogaster
ENSORLG00000008120	srrt	74	71.429	ENSETEG00000016175	SRRT	74	73.548	Echinops_telfairi
ENSORLG00000008120	srrt	61	62.907	ENSEBUG00000008517	-	76	62.907	Eptatretus_burgeri
ENSORLG00000008120	srrt	52	73.978	ENSEASG00005016956	SRRT	96	64.203	Equus_asinus_asinus
ENSORLG00000008120	srrt	52	73.978	ENSECAG00000012292	SRRT	96	64.203	Equus_caballus
ENSORLG00000008120	srrt	80	77.083	ENSEEUG00000009117	SRRT	81	71.875	Erinaceus_europaeus
ENSORLG00000008120	srrt	93	59.456	ENSELUG00000021216	-	96	59.931	Esox_lucius
ENSORLG00000008120	srrt	96	73.648	ENSELUG00000006651	srrt	96	71.950	Esox_lucius
ENSORLG00000008120	srrt	52	73.763	ENSFCAG00000006855	SRRT	96	64.862	Felis_catus
ENSORLG00000008120	srrt	52	70.575	ENSFDAG00000021347	SRRT	95	65.560	Fukomys_damarensis
ENSORLG00000008120	srrt	76	88.492	ENSFHEG00000002756	srrt	93	89.011	Fundulus_heteroclitus
ENSORLG00000008120	srrt	53	58.351	ENSFHEG00000004105	-	97	57.841	Fundulus_heteroclitus
ENSORLG00000008120	srrt	73	66.290	ENSGMOG00000018694	-	94	52.111	Gadus_morhua
ENSORLG00000008120	srrt	96	74.432	ENSGMOG00000018619	srrt	98	74.040	Gadus_morhua
ENSORLG00000008120	srrt	95	84.229	ENSGAFG00000005423	srrt	98	84.965	Gambusia_affinis
ENSORLG00000008120	srrt	93	52.700	ENSGACG00000001100	-	96	54.936	Gasterosteus_aculeatus
ENSORLG00000008120	srrt	96	82.388	ENSGACG00000020387	srrt	98	81.871	Gasterosteus_aculeatus
ENSORLG00000008120	srrt	52	74.242	ENSGGOG00000001508	SRRT	96	65.385	Gorilla_gorilla
ENSORLG00000008120	srrt	52	91.209	ENSHBUG00000002942	srrt	94	86.713	Haplochromis_burtoni
ENSORLG00000008120	srrt	96	64.079	ENSHGLG00000008344	Srrt	94	68.303	Heterocephalus_glaber_female
ENSORLG00000008120	srrt	96	65.192	ENSHGLG00100018857	Srrt	94	69.008	Heterocephalus_glaber_male
ENSORLG00000008120	srrt	93	54.244	ENSHCOG00000008904	-	95	54.394	Hippocampus_comes
ENSORLG00000008120	srrt	98	81.330	ENSHCOG00000005403	srrt	98	80.980	Hippocampus_comes
ENSORLG00000008120	srrt	93	71.152	ENSIPUG00000021150	srrt	98	71.527	Ictalurus_punctatus
ENSORLG00000008120	srrt	52	74.242	ENSSTOG00000013776	SRRT	96	65.621	Ictidomys_tridecemlineatus
ENSORLG00000008120	srrt	96	64.637	ENSJJAG00000010446	Srrt	95	68.293	Jaculus_jaculus
ENSORLG00000008120	srrt	52	64.718	ENSKMAG00000008468	-	96	55.581	Kryptolebias_marmoratus
ENSORLG00000008120	srrt	53	89.744	ENSKMAG00000013599	srrt	98	84.009	Kryptolebias_marmoratus
ENSORLG00000008120	srrt	98	78.125	ENSLBEG00000016308	srrt	98	78.176	Labrus_bergylta
ENSORLG00000008120	srrt	95	54.982	ENSLACG00000001089	SRRT	98	56.782	Latimeria_chalumnae
ENSORLG00000008120	srrt	57	82.595	ENSLOCG00000013658	srrt	100	58.465	Lepisosteus_oculatus
ENSORLG00000008120	srrt	52	73.978	ENSLAFG00000007725	SRRT	96	64.624	Loxodonta_africana
ENSORLG00000008120	srrt	52	74.242	ENSMFAG00000033745	SRRT	99	64.557	Macaca_fascicularis
ENSORLG00000008120	srrt	96	62.984	ENSMMUG00000021255	SRRT	96	65.318	Macaca_mulatta
ENSORLG00000008120	srrt	52	73.978	ENSMNEG00000041864	SRRT	97	64.557	Macaca_nemestrina
ENSORLG00000008120	srrt	52	74.242	ENSMLEG00000029479	SRRT	98	64.557	Mandrillus_leucophaeus
ENSORLG00000008120	srrt	52	66.309	ENSMAMG00000010681	-	96	57.093	Mastacembelus_armatus
ENSORLG00000008120	srrt	52	89.254	ENSMAMG00000014311	srrt	98	85.897	Mastacembelus_armatus
ENSORLG00000008120	srrt	53	65.401	ENSMZEG00005028002	-	96	56.050	Maylandia_zebra
ENSORLG00000008120	srrt	52	91.429	ENSMZEG00005016135	srrt	94	87.063	Maylandia_zebra
ENSORLG00000008120	srrt	52	73.763	ENSMAUG00000011386	Srrt	95	68.200	Mesocricetus_auratus
ENSORLG00000008120	srrt	52	73.978	ENSMICG00000009471	SRRT	98	64.269	Microcebus_murinus
ENSORLG00000008120	srrt	52	73.978	ENSMOCG00000001971	Srrt	95	68.687	Microtus_ochrogaster
ENSORLG00000008120	srrt	83	54.775	ENSMMOG00000011137	-	88	55.319	Mola_mola
ENSORLG00000008120	srrt	95	80.120	ENSMMOG00000016399	srrt	98	80.491	Mola_mola
ENSORLG00000008120	srrt	52	70.085	ENSMODG00000004862	SRRT	95	67.729	Monodelphis_domestica
ENSORLG00000008120	srrt	90	79.497	ENSMALG00000018604	srrt	99	77.858	Monopterus_albus
ENSORLG00000008120	srrt	54	52.128	ENSMALG00000005567	-	88	53.404	Monopterus_albus
ENSORLG00000008120	srrt	96	65.457	MGP_CAROLIEiJ_G0027870	Srrt	99	72.015	Mus_caroli
ENSORLG00000008120	srrt	96	65.457	ENSMUSG00000037364	Srrt	99	72.015	Mus_musculus
ENSORLG00000008120	srrt	52	75.385	MGP_PahariEiJ_G0024456	Srrt	99	72.015	Mus_pahari
ENSORLG00000008120	srrt	96	65.457	MGP_SPRETEiJ_G0028875	Srrt	99	72.015	Mus_spretus
ENSORLG00000008120	srrt	96	63.699	ENSMPUG00000015839	SRRT	96	65.092	Mustela_putorius_furo
ENSORLG00000008120	srrt	52	73.763	ENSMLUG00000009975	SRRT	96	65.323	Myotis_lucifugus
ENSORLG00000008120	srrt	96	64.774	ENSNGAG00000023715	Srrt	100	64.238	Nannospalax_galili
ENSORLG00000008120	srrt	52	90.308	ENSNBRG00000019100	srrt	98	84.400	Neolamprologus_brichardi
ENSORLG00000008120	srrt	95	58.560	ENSNLEG00000011987	SRRT	99	58.830	Nomascus_leucogenys
ENSORLG00000008120	srrt	96	54.407	ENSMEUG00000011941	SRRT	96	53.918	Notamacropus_eugenii
ENSORLG00000008120	srrt	61	75.000	ENSOPRG00000002502	-	67	79.545	Ochotona_princeps
ENSORLG00000008120	srrt	52	75.165	ENSODEG00000016856	SRRT	95	68.496	Octodon_degus
ENSORLG00000008120	srrt	93	56.958	ENSONIG00000016080	-	94	56.909	Oreochromis_niloticus
ENSORLG00000008120	srrt	52	91.209	ENSONIG00000004242	srrt	98	83.655	Oreochromis_niloticus
ENSORLG00000008120	srrt	100	99.540	ENSORLG00020003058	srrt	100	99.540	Oryzias_latipes_hni
ENSORLG00000008120	srrt	100	99.655	ENSORLG00015008062	srrt	100	99.655	Oryzias_latipes_hsok
ENSORLG00000008120	srrt	100	96.560	ENSOMEG00000003155	srrt	100	96.560	Oryzias_melastigma
ENSORLG00000008120	srrt	93	57.160	ENSOMEG00000006963	-	96	56.876	Oryzias_melastigma
ENSORLG00000008120	srrt	52	73.978	ENSOGAG00000017242	SRRT	96	65.323	Otolemur_garnettii
ENSORLG00000008120	srrt	52	73.810	ENSOARG00000015645	SRRT	96	64.855	Ovis_aries
ENSORLG00000008120	srrt	52	74.242	ENSPPAG00000041090	SRRT	96	65.313	Pan_paniscus
ENSORLG00000008120	srrt	52	73.856	ENSPPRG00000009557	SRRT	96	64.849	Panthera_pardus
ENSORLG00000008120	srrt	52	73.763	ENSPTIG00000014355	SRRT	96	64.977	Panthera_tigris_altaica
ENSORLG00000008120	srrt	52	74.242	ENSPTRG00000019511	SRRT	99	62.660	Pan_troglodytes
ENSORLG00000008120	srrt	94	68.193	ENSPKIG00000022212	-	98	68.134	Paramormyrops_kingsleyae
ENSORLG00000008120	srrt	98	69.792	ENSPKIG00000005434	srrt	98	71.818	Paramormyrops_kingsleyae
ENSORLG00000008120	srrt	52	74.505	ENSPSIG00000016311	SRRT	98	63.532	Pelodiscus_sinensis
ENSORLG00000008120	srrt	85	86.393	ENSPMGG00000002841	srrt	98	76.014	Periophthalmus_magnuspinnatus
ENSORLG00000008120	srrt	52	75.385	ENSPEMG00000010834	Srrt	95	68.496	Peromyscus_maniculatus_bairdii
ENSORLG00000008120	srrt	96	54.913	ENSPMAG00000009614	-	56	62.578	Petromyzon_marinus
ENSORLG00000008120	srrt	96	63.711	ENSPCIG00000000816	SRRT	96	65.465	Phascolarctos_cinereus
ENSORLG00000008120	srrt	95	84.606	ENSPFOG00000005704	srrt	98	85.332	Poecilia_formosa
ENSORLG00000008120	srrt	95	82.999	ENSPLAG00000021992	srrt	98	83.525	Poecilia_latipinna
ENSORLG00000008120	srrt	95	84.368	ENSPMEG00000001182	srrt	98	84.750	Poecilia_mexicana
ENSORLG00000008120	srrt	95	84.487	ENSPREG00000022308	srrt	98	84.983	Poecilia_reticulata
ENSORLG00000008120	srrt	52	56.061	ENSPPYG00000017432	SRRT	95	55.814	Pongo_abelii
ENSORLG00000008120	srrt	52	71.882	ENSPCAG00000001621	SRRT	96	62.942	Procavia_capensis
ENSORLG00000008120	srrt	52	74.242	ENSPCOG00000025751	SRRT	96	65.207	Propithecus_coquereli
ENSORLG00000008120	srrt	66	66.022	ENSPVAG00000000834	SRRT	100	56.818	Pteropus_vampyrus
ENSORLG00000008120	srrt	52	91.429	ENSPNYG00000018710	srrt	98	86.830	Pundamilia_nyererei
ENSORLG00000008120	srrt	72	86.076	ENSPNAG00000010629	srrt	97	58.994	Pygocentrus_nattereri
ENSORLG00000008120	srrt	52	64.847	ENSRNOG00000048277	AABR07035787.1	97	63.333	Rattus_norvegicus
ENSORLG00000008120	srrt	52	73.978	ENSRBIG00000035718	SRRT	97	64.557	Rhinopithecus_bieti
ENSORLG00000008120	srrt	52	73.978	ENSRROG00000030622	SRRT	98	64.557	Rhinopithecus_roxellana
ENSORLG00000008120	srrt	52	74.242	ENSSBOG00000033570	SRRT	96	65.421	Saimiri_boliviensis_boliviensis
ENSORLG00000008120	srrt	72	60.217	ENSSHAG00000007349	-	99	62.866	Sarcophilus_harrisii
ENSORLG00000008120	srrt	94	72.608	ENSSFOG00015017293	srrt	98	74.371	Scleropages_formosus
ENSORLG00000008120	srrt	52	62.500	ENSSMAG00000018195	-	95	54.779	Scophthalmus_maximus
ENSORLG00000008120	srrt	95	83.593	ENSSMAG00000015342	srrt	98	84.732	Scophthalmus_maximus
ENSORLG00000008120	srrt	95	87.694	ENSSDUG00000012049	srrt	98	85.082	Seriola_dumerili
ENSORLG00000008120	srrt	52	55.650	ENSSDUG00000002051	-	98	55.441	Seriola_dumerili
ENSORLG00000008120	srrt	83	90.789	ENSSLDG00000017477	srrt	91	90.446	Seriola_lalandi_dorsalis
ENSORLG00000008120	srrt	95	85.748	ENSSPAG00000005665	srrt	96	86.211	Stegastes_partitus
ENSORLG00000008120	srrt	52	57.609	ENSSPAG00000018943	-	98	56.790	Stegastes_partitus
ENSORLG00000008120	srrt	90	54.193	ENSTRUG00000000023	-	93	54.655	Takifugu_rubripes
ENSORLG00000008120	srrt	98	80.600	ENSTRUG00000016075	srrt	98	80.116	Takifugu_rubripes
ENSORLG00000008120	srrt	93	52.593	ENSTNIG00000003111	-	95	54.123	Tetraodon_nigroviridis
ENSORLG00000008120	srrt	74	74.850	ENSTNIG00000011779	srrt	100	75.898	Tetraodon_nigroviridis
ENSORLG00000008120	srrt	59	76.596	ENSTBEG00000005212	SRRT	60	76.596	Tupaia_belangeri
ENSORLG00000008120	srrt	52	73.978	ENSTTRG00000011104	SRRT	96	65.092	Tursiops_truncatus
ENSORLG00000008120	srrt	52	73.978	ENSUAMG00000027997	SRRT	98	65.197	Ursus_americanus
ENSORLG00000008120	srrt	52	73.978	ENSUMAG00000011295	SRRT	96	65.202	Ursus_maritimus
ENSORLG00000008120	srrt	96	63.437	ENSVVUG00000023572	SRRT	96	64.261	Vulpes_vulpes
ENSORLG00000008120	srrt	72	75.281	ENSXETG00000025124	srrt	75	76.966	Xenopus_tropicalis
ENSORLG00000008120	srrt	53	53.404	ENSXCOG00000013105	-	94	54.043	Xiphophorus_couchianus
ENSORLG00000008120	srrt	52	63.913	ENSXMAG00000002090	-	96	54.824	Xiphophorus_maculatus
ENSORLG00000008120	srrt	98	84.615	ENSXMAG00000007627	srrt	98	85.082	Xiphophorus_maculatus