EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008126 (Gene tree)
Gene ID: 101162706
Gene Symbol: ccdc12
Alias: -
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 7312 bases
Position: chr16:16698901-16706212
Accession: 101162706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010197	cwf18	PF08315.12	2.1e-38	1	1
ENSORLP00000036469	cwf18	PF08315.12	3.7e-27	1	1
ENSORLP00000027540	cwf18	PF08315.12	2.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000030479	-	489	-	ENSORLP00000036469	162 (aa)	-	-
ENSORLT00000010198	-	498	XM_020710149	ENSORLP00000010197	165 (aa)	XP_020565808	H2LVR2
ENSORLT00000032600	-	396	-	ENSORLP00000027540	131 (aa)	-	-

Gene Model

Click here to download ENSORLG00000008126's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008126's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008126	ccdc12	93	69.481	ENSG00000160799	CCDC12	91	69.481	Homo_sapiens
ENSORLG00000008126	ccdc12	100	89.697	ENSAPOG00000014426	ccdc12	60	89.697	Acanthochromis_polyacanthus
ENSORLG00000008126	ccdc12	96	68.553	ENSAMEG00000012658	CCDC12	94	68.553	Ailuropoda_melanoleuca
ENSORLG00000008126	ccdc12	98	74.809	ENSACIG00000015192	ccdc12	80	91.964	Amphilophus_citrinellus
ENSORLG00000008126	ccdc12	86	81.579	ENSACIG00000022676	-	86	90.083	Amphilophus_citrinellus
ENSORLG00000008126	ccdc12	98	89.441	ENSAOCG00000024127	ccdc12	95	89.441	Amphiprion_ocellaris
ENSORLG00000008126	ccdc12	100	89.091	ENSAPEG00000009155	ccdc12	86	89.091	Amphiprion_percula
ENSORLG00000008126	ccdc12	100	76.692	ENSATEG00000004807	ccdc12	100	89.552	Anabas_testudineus
ENSORLG00000008126	ccdc12	99	60.000	ENSAPLG00000005482	CCDC12	100	68.613	Anas_platyrhynchos
ENSORLG00000008126	ccdc12	100	70.659	ENSACAG00000004727	CCDC12	86	70.659	Anolis_carolinensis
ENSORLG00000008126	ccdc12	75	73.984	ENSANAG00000024483	CCDC12	93	73.387	Aotus_nancymaae
ENSORLG00000008126	ccdc12	95	72.611	ENSACLG00000012742	-	96	72.611	Astatotilapia_calliptera
ENSORLG00000008126	ccdc12	100	84.848	ENSACLG00000005356	ccdc12	100	84.848	Astatotilapia_calliptera
ENSORLG00000008126	ccdc12	100	78.788	ENSAMXG00000016319	ccdc12	100	78.788	Astyanax_mexicanus
ENSORLG00000008126	ccdc12	89	70.748	ENSBTAG00000011311	CCDC12	92	68.354	Bos_taurus
ENSORLG00000008126	ccdc12	83	41.727	WBGene00022092	Y69A2AR.21	85	40.260	Caenorhabditis_elegans
ENSORLG00000008126	ccdc12	93	69.935	ENSCJAG00000002280	CCDC12	91	69.481	Callithrix_jacchus
ENSORLG00000008126	ccdc12	96	68.553	ENSCAFG00000013588	CCDC12	94	68.553	Canis_familiaris
ENSORLG00000008126	ccdc12	93	70.130	ENSCAFG00020014024	CCDC12	84	70.130	Canis_lupus_dingo
ENSORLG00000008126	ccdc12	89	70.748	ENSCHIG00000014512	CCDC12	92	68.354	Capra_hircus
ENSORLG00000008126	ccdc12	93	69.281	ENSTSYG00000032837	CCDC12	90	69.281	Carlito_syrichta
ENSORLG00000008126	ccdc12	56	66.216	ENSCAPG00000007935	CCDC12	75	80.000	Cavia_aperea
ENSORLG00000008126	ccdc12	96	68.553	ENSCPOG00000032515	CCDC12	94	68.553	Cavia_porcellus
ENSORLG00000008126	ccdc12	93	69.481	ENSCCAG00000020126	CCDC12	84	69.481	Cebus_capucinus
ENSORLG00000008126	ccdc12	93	59.091	ENSCATG00000033681	CCDC12	83	59.091	Cercocebus_atys
ENSORLG00000008126	ccdc12	93	70.588	ENSCLAG00000016013	CCDC12	90	70.588	Chinchilla_lanigera
ENSORLG00000008126	ccdc12	93	68.831	ENSCSAG00000016154	CCDC12	84	68.831	Chlorocebus_sabaeus
ENSORLG00000008126	ccdc12	98	71.341	ENSCPBG00000015804	CCDC12	77	71.341	Chrysemys_picta_bellii
ENSORLG00000008126	ccdc12	95	49.682	ENSCING00000005261	-	90	49.682	Ciona_intestinalis
ENSORLG00000008126	ccdc12	93	68.831	ENSCANG00000020857	CCDC12	84	68.831	Colobus_angolensis_palliatus
ENSORLG00000008126	ccdc12	98	68.098	ENSCGRG00001000459	Ccdc12	96	68.098	Cricetulus_griseus_chok1gshd
ENSORLG00000008126	ccdc12	98	68.098	ENSCGRG00000012816	Ccdc12	96	68.098	Cricetulus_griseus_crigri
ENSORLG00000008126	ccdc12	100	86.667	ENSCSEG00000004543	ccdc12	100	86.667	Cynoglossus_semilaevis
ENSORLG00000008126	ccdc12	100	75.940	ENSCVAG00000011342	ccdc12	100	90.299	Cyprinodon_variegatus
ENSORLG00000008126	ccdc12	100	80.000	ENSDARG00000023003	ccdc12	100	80.000	Danio_rerio
ENSORLG00000008126	ccdc12	98	61.963	ENSDORG00000024399	-	96	61.963	Dipodomys_ordii
ENSORLG00000008126	ccdc12	88	68.707	ENSDORG00000016567	-	96	68.098	Dipodomys_ordii
ENSORLG00000008126	ccdc12	98	40.123	FBgn0039732	CG15525	92	40.123	Drosophila_melanogaster
ENSORLG00000008126	ccdc12	67	63.636	ENSETEG00000000030	CCDC12	95	63.636	Echinops_telfairi
ENSORLG00000008126	ccdc12	100	57.576	ENSEBUG00000005674	ccdc12	100	57.576	Eptatretus_burgeri
ENSORLG00000008126	ccdc12	93	69.935	ENSEASG00005008148	-	62	69.935	Equus_asinus_asinus
ENSORLG00000008126	ccdc12	93	64.052	ENSECAG00000008649	CCDC12	90	64.052	Equus_caballus
ENSORLG00000008126	ccdc12	100	80.838	ENSELUG00000024105	ccdc12	100	80.838	Esox_lucius
ENSORLG00000008126	ccdc12	96	67.925	ENSFCAG00000015474	CCDC12	94	67.925	Felis_catus
ENSORLG00000008126	ccdc12	95	58.228	ENSFALG00000001895	CCDC12	97	58.228	Ficedula_albicollis
ENSORLG00000008126	ccdc12	96	68.553	ENSFDAG00000002549	CCDC12	95	68.553	Fukomys_damarensis
ENSORLG00000008126	ccdc12	100	90.303	ENSFHEG00000016247	ccdc12	93	90.303	Fundulus_heteroclitus
ENSORLG00000008126	ccdc12	100	72.727	ENSGMOG00000016901	ccdc12	100	72.727	Gadus_morhua
ENSORLG00000008126	ccdc12	91	89.333	ENSGAFG00000006762	ccdc12	100	88.485	Gambusia_affinis
ENSORLG00000008126	ccdc12	100	84.848	ENSGACG00000008629	ccdc12	100	84.848	Gasterosteus_aculeatus
ENSORLG00000008126	ccdc12	98	71.951	ENSGAGG00000019688	CCDC12	95	71.951	Gopherus_agassizii
ENSORLG00000008126	ccdc12	93	69.481	ENSGGOG00000009012	CCDC12	84	69.481	Gorilla_gorilla
ENSORLG00000008126	ccdc12	100	84.848	ENSHBUG00000016447	ccdc12	100	84.848	Haplochromis_burtoni
ENSORLG00000008126	ccdc12	96	68.553	ENSHGLG00000014058	CCDC12	94	68.553	Heterocephalus_glaber_female
ENSORLG00000008126	ccdc12	96	68.553	ENSHGLG00100005918	CCDC12	94	68.553	Heterocephalus_glaber_male
ENSORLG00000008126	ccdc12	100	82.530	ENSHCOG00000015164	ccdc12	100	82.530	Hippocampus_comes
ENSORLG00000008126	ccdc12	99	71.951	ENSIPUG00000001310	Ccdc12	99	71.951	Ictalurus_punctatus
ENSORLG00000008126	ccdc12	96	69.182	ENSSTOG00000003085	CCDC12	94	69.182	Ictidomys_tridecemlineatus
ENSORLG00000008126	ccdc12	98	66.871	ENSJJAG00000014918	Ccdc12	96	66.871	Jaculus_jaculus
ENSORLG00000008126	ccdc12	100	87.425	ENSKMAG00000013891	ccdc12	100	87.425	Kryptolebias_marmoratus
ENSORLG00000008126	ccdc12	99	85.366	ENSLBEG00000024714	ccdc12	86	85.366	Labrus_bergylta
ENSORLG00000008126	ccdc12	100	78.182	ENSLOCG00000005683	ccdc12	92	78.182	Lepisosteus_oculatus
ENSORLG00000008126	ccdc12	94	67.742	ENSLAFG00000027745	-	93	67.742	Loxodonta_africana
ENSORLG00000008126	ccdc12	79	70.192	ENSLAFG00000022573	-	91	79.808	Loxodonta_africana
ENSORLG00000008126	ccdc12	93	68.831	ENSMFAG00000002976	CCDC12	84	68.831	Macaca_fascicularis
ENSORLG00000008126	ccdc12	93	68.831	ENSMMUG00000019810	CCDC12	84	68.831	Macaca_mulatta
ENSORLG00000008126	ccdc12	93	68.831	ENSMNEG00000035785	CCDC12	84	68.831	Macaca_nemestrina
ENSORLG00000008126	ccdc12	93	68.831	ENSMLEG00000038060	CCDC12	84	68.831	Mandrillus_leucophaeus
ENSORLG00000008126	ccdc12	91	88.000	ENSMAMG00000012165	ccdc12	100	86.667	Mastacembelus_armatus
ENSORLG00000008126	ccdc12	100	85.455	ENSMZEG00005014728	ccdc12	100	85.455	Maylandia_zebra
ENSORLG00000008126	ccdc12	95	73.248	ENSMZEG00005019013	-	96	73.248	Maylandia_zebra
ENSORLG00000008126	ccdc12	99	60.741	ENSMGAG00000002815	CCDC12	90	64.815	Meleagris_gallopavo
ENSORLG00000008126	ccdc12	96	67.296	ENSMAUG00000008879	Ccdc12	94	67.296	Mesocricetus_auratus
ENSORLG00000008126	ccdc12	96	66.875	ENSMICG00000032886	CCDC12	94	67.500	Microcebus_murinus
ENSORLG00000008126	ccdc12	98	67.485	ENSMOCG00000004483	Ccdc12	96	67.485	Microtus_ochrogaster
ENSORLG00000008126	ccdc12	92	75.207	ENSMMOG00000001860	ccdc12	75	90.826	Mola_mola
ENSORLG00000008126	ccdc12	98	71.341	ENSMODG00000013967	-	91	74.342	Monodelphis_domestica
ENSORLG00000008126	ccdc12	98	64.198	ENSMODG00000025021	-	96	64.198	Monodelphis_domestica
ENSORLG00000008126	ccdc12	93	62.602	ENSMODG00000022615	-	91	64.667	Monodelphis_domestica
ENSORLG00000008126	ccdc12	100	87.273	ENSMALG00000011850	ccdc12	100	87.273	Monopterus_albus
ENSORLG00000008126	ccdc12	98	68.098	MGP_CAROLIEiJ_G0032737	-	71	93.103	Mus_caroli
ENSORLG00000008126	ccdc12	98	67.485	ENSMUSG00000019659	Ccdc12	96	67.485	Mus_musculus
ENSORLG00000008126	ccdc12	98	68.098	MGP_PahariEiJ_G0015604	Ccdc12	96	68.098	Mus_pahari
ENSORLG00000008126	ccdc12	98	67.485	MGP_SPRETEiJ_G0033885	Ccdc12	96	67.485	Mus_spretus
ENSORLG00000008126	ccdc12	96	64.780	ENSMLUG00000009547	CCDC12	93	66.154	Myotis_lucifugus
ENSORLG00000008126	ccdc12	98	67.485	ENSNGAG00000004149	Ccdc12	96	67.485	Nannospalax_galili
ENSORLG00000008126	ccdc12	100	80.000	ENSNBRG00000015275	ccdc12	100	80.000	Neolamprologus_brichardi
ENSORLG00000008126	ccdc12	93	69.935	ENSNLEG00000006219	CCDC12	90	69.935	Nomascus_leucogenys
ENSORLG00000008126	ccdc12	93	66.234	ENSOPRG00000005086	CCDC12	91	66.883	Ochotona_princeps
ENSORLG00000008126	ccdc12	96	68.553	ENSODEG00000012202	CCDC12	94	68.553	Octodon_degus
ENSORLG00000008126	ccdc12	100	85.455	ENSONIG00000003061	ccdc12	100	85.455	Oreochromis_niloticus
ENSORLG00000008126	ccdc12	85	72.321	ENSOANG00000004263	-	100	72.932	Ornithorhynchus_anatinus
ENSORLG00000008126	ccdc12	96	67.925	ENSOCUG00000012431	CCDC12	80	67.925	Oryctolagus_cuniculus
ENSORLG00000008126	ccdc12	100	95.152	ENSORLG00020013927	ccdc12	100	95.152	Oryzias_latipes_hni
ENSORLG00000008126	ccdc12	100	95.152	ENSORLG00015020115	ccdc12	100	95.152	Oryzias_latipes_hsok
ENSORLG00000008126	ccdc12	100	90.303	ENSOMEG00000022304	ccdc12	100	90.303	Oryzias_melastigma
ENSORLG00000008126	ccdc12	100	90.303	ENSOMEG00000014082	ccdc12	100	90.303	Oryzias_melastigma
ENSORLG00000008126	ccdc12	81	66.355	ENSOGAG00000016807	CCDC12	96	75.000	Otolemur_garnettii
ENSORLG00000008126	ccdc12	76	71.000	ENSOARG00000006426	CCDC12	96	70.229	Ovis_aries
ENSORLG00000008126	ccdc12	93	69.481	ENSPPAG00000028782	CCDC12	84	69.481	Pan_paniscus
ENSORLG00000008126	ccdc12	96	67.925	ENSPPRG00000013547	CCDC12	94	67.925	Panthera_pardus
ENSORLG00000008126	ccdc12	93	69.481	ENSPTIG00000014875	CCDC12	87	69.481	Panthera_tigris_altaica
ENSORLG00000008126	ccdc12	93	69.481	ENSPTRG00000014862	CCDC12	84	69.481	Pan_troglodytes
ENSORLG00000008126	ccdc12	93	68.831	ENSPANG00000017485	CCDC12	86	68.831	Papio_anubis
ENSORLG00000008126	ccdc12	100	71.687	ENSPKIG00000019130	ccdc12	100	74.096	Paramormyrops_kingsleyae
ENSORLG00000008126	ccdc12	84	74.775	ENSPSIG00000010867	CCDC12	100	83.784	Pelodiscus_sinensis
ENSORLG00000008126	ccdc12	100	86.061	ENSPMGG00000012211	ccdc12	100	86.061	Periophthalmus_magnuspinnatus
ENSORLG00000008126	ccdc12	99	53.333	ENSPEMG00000001376	-	97	53.333	Peromyscus_maniculatus_bairdii
ENSORLG00000008126	ccdc12	98	68.098	ENSPEMG00000022196	-	96	68.098	Peromyscus_maniculatus_bairdii
ENSORLG00000008126	ccdc12	96	72.327	ENSPMAG00000000005	ccdc12	86	76.351	Petromyzon_marinus
ENSORLG00000008126	ccdc12	98	70.988	ENSPCIG00000025941	CCDC12	91	74.000	Phascolarctos_cinereus
ENSORLG00000008126	ccdc12	88	89.726	ENSPFOG00000000343	ccdc12	100	88.485	Poecilia_formosa
ENSORLG00000008126	ccdc12	100	89.697	ENSPLAG00000019010	ccdc12	100	89.697	Poecilia_latipinna
ENSORLG00000008126	ccdc12	88	89.726	ENSPMEG00000022371	ccdc12	81	88.485	Poecilia_mexicana
ENSORLG00000008126	ccdc12	100	89.091	ENSPREG00000020932	ccdc12	81	89.091	Poecilia_reticulata
ENSORLG00000008126	ccdc12	93	69.481	ENSPPYG00000013924	CCDC12	75	69.481	Pongo_abelii
ENSORLG00000008126	ccdc12	96	68.125	ENSPCAG00000005800	CCDC12	94	68.125	Procavia_capensis
ENSORLG00000008126	ccdc12	92	69.737	ENSPCOG00000018682	CCDC12	83	70.395	Propithecus_coquereli
ENSORLG00000008126	ccdc12	93	69.935	ENSPVAG00000004204	CCDC12	90	69.935	Pteropus_vampyrus
ENSORLG00000008126	ccdc12	100	85.455	ENSPNYG00000016295	ccdc12	100	85.455	Pundamilia_nyererei
ENSORLG00000008126	ccdc12	100	63.636	ENSPNAG00000028558	ccdc12	90	86.607	Pygocentrus_nattereri
ENSORLG00000008126	ccdc12	98	68.098	ENSRNOG00000020946	Ccdc12	96	68.098	Rattus_norvegicus
ENSORLG00000008126	ccdc12	93	68.831	ENSRBIG00000039910	CCDC12	84	68.831	Rhinopithecus_bieti
ENSORLG00000008126	ccdc12	93	68.831	ENSRROG00000039721	CCDC12	91	68.831	Rhinopithecus_roxellana
ENSORLG00000008126	ccdc12	93	69.481	ENSSBOG00000035443	CCDC12	84	69.481	Saimiri_boliviensis_boliviensis
ENSORLG00000008126	ccdc12	91	76.000	ENSSHAG00000003265	-	91	76.000	Sarcophilus_harrisii
ENSORLG00000008126	ccdc12	100	75.301	ENSSFOG00015001307	ccdc12	100	75.301	Scleropages_formosus
ENSORLG00000008126	ccdc12	91	86.000	ENSSMAG00000019856	ccdc12	100	84.940	Scophthalmus_maximus
ENSORLG00000008126	ccdc12	100	84.848	ENSSDUG00000006549	ccdc12	100	84.848	Seriola_dumerili
ENSORLG00000008126	ccdc12	100	87.879	ENSSLDG00000015956	ccdc12	100	87.879	Seriola_lalandi_dorsalis
ENSORLG00000008126	ccdc12	90	45.890	ENSSPUG00000013054	CCDC12	91	45.890	Sphenodon_punctatus
ENSORLG00000008126	ccdc12	100	87.879	ENSSPAG00000007010	ccdc12	100	87.879	Stegastes_partitus
ENSORLG00000008126	ccdc12	98	67.284	ENSSSCG00000011329	-	96	67.284	Sus_scrofa
ENSORLG00000008126	ccdc12	76	41.584	ENSSSCG00000007882	-	69	51.485	Sus_scrofa
ENSORLG00000008126	ccdc12	67	66.667	ENSTGUG00000000186	CCDC12	86	66.667	Taeniopygia_guttata
ENSORLG00000008126	ccdc12	100	78.182	ENSTRUG00000014023	ccdc12	85	78.182	Takifugu_rubripes
ENSORLG00000008126	ccdc12	100	80.000	ENSTNIG00000018407	ccdc12	98	80.000	Tetraodon_nigroviridis
ENSORLG00000008126	ccdc12	98	45.679	ENSTBEG00000000048	CCDC12	96	45.679	Tupaia_belangeri
ENSORLG00000008126	ccdc12	98	64.634	ENSTTRG00000015854	CCDC12	96	65.244	Tursiops_truncatus
ENSORLG00000008126	ccdc12	93	63.636	ENSUAMG00000025548	CCDC12	93	72.263	Ursus_americanus
ENSORLG00000008126	ccdc12	96	68.553	ENSUMAG00000004346	CCDC12	94	68.553	Ursus_maritimus
ENSORLG00000008126	ccdc12	67	57.273	ENSVPAG00000000070	-	95	57.273	Vicugna_pacos
ENSORLG00000008126	ccdc12	96	68.553	ENSVVUG00000004582	CCDC12	94	68.553	Vulpes_vulpes
ENSORLG00000008126	ccdc12	99	64.394	ENSXETG00000013123	ccdc12	100	73.333	Xenopus_tropicalis
ENSORLG00000008126	ccdc12	100	87.879	ENSXCOG00000019741	ccdc12	100	87.879	Xiphophorus_couchianus
ENSORLG00000008126	ccdc12	100	87.273	ENSXMAG00000014098	ccdc12	81	87.273	Xiphophorus_maculatus