EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008161 (Gene tree)
Gene ID: 101161618
Gene Symbol: sltm
Alias: -
Full Name: SAFB like transcription modulator
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 15009 bases
Position: chr3:21234790-21249798
Accession: 101161618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010249	RRM_5	PF13893.6	6.5e-09	1	1
ENSORLP00000010249	RRM_1	PF00076.22	2.1e-11	1	1
ENSORLP00000010249	SAP	PF02037.27	4.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000010250	-	2956	XM_004067175	ENSORLP00000010249	960 (aa)	XP_004067223	H2LVW4

Gene Model

Click here to download ENSORLG00000008161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008161	sltm	99	44.785	ENSG00000137776	SLTM	98	48.780	Homo_sapiens
ENSORLG00000008161	sltm	100	72.646	ENSAPOG00000012346	sltm	100	73.380	Acanthochromis_polyacanthus
ENSORLG00000008161	sltm	90	46.732	ENSAMEG00000004537	SLTM	86	46.464	Ailuropoda_melanoleuca
ENSORLG00000008161	sltm	100	69.509	ENSACIG00000001971	sltm	100	68.474	Amphilophus_citrinellus
ENSORLG00000008161	sltm	100	72.772	ENSAOCG00000002747	sltm	100	73.459	Amphiprion_ocellaris
ENSORLG00000008161	sltm	100	72.475	ENSAPEG00000012366	sltm	100	73.161	Amphiprion_percula
ENSORLG00000008161	sltm	100	70.949	ENSATEG00000003763	sltm	100	71.259	Anabas_testudineus
ENSORLG00000008161	sltm	95	44.236	ENSAPLG00000013025	SLTM	86	44.627	Anas_platyrhynchos
ENSORLG00000008161	sltm	91	46.858	ENSACAG00000015120	SLTM	83	45.981	Anolis_carolinensis
ENSORLG00000008161	sltm	99	45.130	ENSANAG00000037031	SLTM	98	45.533	Aotus_nancymaae
ENSORLG00000008161	sltm	100	71.386	ENSACLG00000002523	sltm	100	69.292	Astatotilapia_calliptera
ENSORLG00000008161	sltm	99	56.589	ENSAMXG00000012409	sltm	96	57.859	Astyanax_mexicanus
ENSORLG00000008161	sltm	99	47.796	ENSBTAG00000011319	SLTM	98	47.595	Bos_taurus
ENSORLG00000008161	sltm	99	45.034	ENSCJAG00000020395	SLTM	98	45.385	Callithrix_jacchus
ENSORLG00000008161	sltm	99	45.761	ENSCAFG00000016586	SLTM	98	46.124	Canis_familiaris
ENSORLG00000008161	sltm	99	45.489	ENSCAFG00020011253	SLTM	99	46.116	Canis_lupus_dingo
ENSORLG00000008161	sltm	99	46.467	ENSCHIG00000008780	SLTM	99	46.603	Capra_hircus
ENSORLG00000008161	sltm	91	45.612	ENSTSYG00000013581	SLTM	82	45.996	Carlito_syrichta
ENSORLG00000008161	sltm	80	46.200	ENSCAPG00000013326	SLTM	71	46.345	Cavia_aperea
ENSORLG00000008161	sltm	80	48.301	ENSCPOG00000026109	SLTM	80	48.597	Cavia_porcellus
ENSORLG00000008161	sltm	99	44.937	ENSCCAG00000022982	SLTM	98	45.437	Cebus_capucinus
ENSORLG00000008161	sltm	99	45.367	ENSCATG00000030254	SLTM	99	45.489	Cercocebus_atys
ENSORLG00000008161	sltm	88	46.861	ENSCLAG00000007160	SLTM	87	46.413	Chinchilla_lanigera
ENSORLG00000008161	sltm	99	47.157	ENSCPBG00000006045	SLTM	91	58.427	Chrysemys_picta_bellii
ENSORLG00000008161	sltm	99	45.956	ENSCGRG00001022009	Sltm	83	46.328	Cricetulus_griseus_chok1gshd
ENSORLG00000008161	sltm	91	46.760	ENSCGRG00000014806	Sltm	87	46.436	Cricetulus_griseus_crigri
ENSORLG00000008161	sltm	96	62.944	ENSCSEG00000001618	sltm	95	62.487	Cynoglossus_semilaevis
ENSORLG00000008161	sltm	99	59.519	ENSDARG00000052728	sltm	95	65.234	Danio_rerio
ENSORLG00000008161	sltm	99	45.167	ENSDNOG00000002975	SLTM	82	46.537	Dasypus_novemcinctus
ENSORLG00000008161	sltm	66	50.313	ENSDORG00000007463	Sltm	75	50.313	Dipodomys_ordii
ENSORLG00000008161	sltm	80	42.323	ENSETEG00000008003	SLTM	87	41.028	Echinops_telfairi
ENSORLG00000008161	sltm	91	46.145	ENSEASG00005006792	SLTM	99	45.480	Equus_asinus_asinus
ENSORLG00000008161	sltm	99	44.081	ENSECAG00000011267	SLTM	99	45.480	Equus_caballus
ENSORLG00000008161	sltm	86	47.276	ENSEEUG00000000580	SLTM	73	50.897	Erinaceus_europaeus
ENSORLG00000008161	sltm	86	64.583	ENSELUG00000013388	sltm	74	64.583	Esox_lucius
ENSORLG00000008161	sltm	99	46.903	ENSFCAG00000004826	SLTM	99	46.176	Felis_catus
ENSORLG00000008161	sltm	95	46.184	ENSFALG00000012285	SLTM	86	44.978	Ficedula_albicollis
ENSORLG00000008161	sltm	91	46.645	ENSFDAG00000018075	SLTM	87	46.818	Fukomys_damarensis
ENSORLG00000008161	sltm	65	56.535	ENSFHEG00000014764	sltm	100	53.878	Fundulus_heteroclitus
ENSORLG00000008161	sltm	63	58.654	ENSGMOG00000015455	sltm	64	59.259	Gadus_morhua
ENSORLG00000008161	sltm	100	64.073	ENSGACG00000015814	sltm	99	62.620	Gasterosteus_aculeatus
ENSORLG00000008161	sltm	99	47.071	ENSGAGG00000021279	SLTM	98	47.200	Gopherus_agassizii
ENSORLG00000008161	sltm	99	45.130	ENSGGOG00000015866	SLTM	98	45.665	Gorilla_gorilla
ENSORLG00000008161	sltm	100	71.386	ENSHBUG00000012461	sltm	100	69.292	Haplochromis_burtoni
ENSORLG00000008161	sltm	91	45.748	ENSHGLG00000018512	-	83	45.730	Heterocephalus_glaber_female
ENSORLG00000008161	sltm	99	39.461	ENSHGLG00000015426	-	61	41.531	Heterocephalus_glaber_female
ENSORLG00000008161	sltm	99	41.098	ENSHGLG00100002674	-	99	41.595	Heterocephalus_glaber_male
ENSORLG00000008161	sltm	99	39.826	ENSHGLG00100001757	-	99	40.312	Heterocephalus_glaber_male
ENSORLG00000008161	sltm	99	37.198	ENSHGLG00100002576	-	80	35.111	Heterocephalus_glaber_male
ENSORLG00000008161	sltm	99	53.637	ENSHCOG00000003395	sltm	88	60.526	Hippocampus_comes
ENSORLG00000008161	sltm	99	60.402	ENSIPUG00000023201	sltm	92	60.381	Ictalurus_punctatus
ENSORLG00000008161	sltm	91	46.429	ENSSTOG00000000584	SLTM	87	46.104	Ictidomys_tridecemlineatus
ENSORLG00000008161	sltm	99	45.736	ENSJJAG00000006970	Sltm	85	46.063	Jaculus_jaculus
ENSORLG00000008161	sltm	100	67.333	ENSKMAG00000007570	sltm	100	64.776	Kryptolebias_marmoratus
ENSORLG00000008161	sltm	100	65.257	ENSLBEG00000025472	sltm	100	65.230	Labrus_bergylta
ENSORLG00000008161	sltm	99	46.442	ENSLACG00000005234	SLTM	99	46.298	Latimeria_chalumnae
ENSORLG00000008161	sltm	100	55.313	ENSLOCG00000013629	sltm	100	54.681	Lepisosteus_oculatus
ENSORLG00000008161	sltm	99	45.411	ENSLAFG00000017922	SLTM	81	49.383	Loxodonta_africana
ENSORLG00000008161	sltm	99	45.367	ENSMFAG00000033354	SLTM	99	45.489	Macaca_fascicularis
ENSORLG00000008161	sltm	99	45.367	ENSMMUG00000022200	SLTM	99	45.489	Macaca_mulatta
ENSORLG00000008161	sltm	99	45.270	ENSMNEG00000025105	SLTM	99	45.394	Macaca_nemestrina
ENSORLG00000008161	sltm	99	45.463	ENSMLEG00000043355	SLTM	99	45.394	Mandrillus_leucophaeus
ENSORLG00000008161	sltm	100	69.578	ENSMAMG00000021391	sltm	100	69.277	Mastacembelus_armatus
ENSORLG00000008161	sltm	100	71.386	ENSMZEG00005013839	sltm	100	69.292	Maylandia_zebra
ENSORLG00000008161	sltm	90	46.623	ENSMGAG00000005313	SLTM	92	50.000	Meleagris_gallopavo
ENSORLG00000008161	sltm	99	46.346	ENSMAUG00000014391	Sltm	99	45.895	Mesocricetus_auratus
ENSORLG00000008161	sltm	99	44.861	ENSMICG00000013069	SLTM	99	44.991	Microcebus_murinus
ENSORLG00000008161	sltm	99	45.949	ENSMOCG00000012419	Sltm	83	46.195	Microtus_ochrogaster
ENSORLG00000008161	sltm	100	64.191	ENSMMOG00000016470	sltm	100	65.988	Mola_mola
ENSORLG00000008161	sltm	99	45.874	ENSMODG00000008794	-	77	48.679	Monodelphis_domestica
ENSORLG00000008161	sltm	100	71.029	ENSMALG00000021474	sltm	100	70.842	Monopterus_albus
ENSORLG00000008161	sltm	99	42.571	MGP_CAROLIEiJ_G0032404	Sltm	83	44.805	Mus_caroli
ENSORLG00000008161	sltm	99	42.802	ENSMUSG00000032212	Sltm	98	45.349	Mus_musculus
ENSORLG00000008161	sltm	99	42.286	MGP_PahariEiJ_G0015268	Sltm	83	45.022	Mus_pahari
ENSORLG00000008161	sltm	99	41.985	MGP_SPRETEiJ_G0033542	Sltm	83	44.913	Mus_spretus
ENSORLG00000008161	sltm	91	46.479	ENSMPUG00000004229	SLTM	82	46.162	Mustela_putorius_furo
ENSORLG00000008161	sltm	91	45.963	ENSMLUG00000000742	SLTM	87	46.022	Myotis_lucifugus
ENSORLG00000008161	sltm	99	45.394	ENSNGAG00000012328	Sltm	83	46.220	Nannospalax_galili
ENSORLG00000008161	sltm	100	66.567	ENSNBRG00000010183	sltm	100	61.876	Neolamprologus_brichardi
ENSORLG00000008161	sltm	99	45.227	ENSNLEG00000011440	SLTM	99	45.446	Nomascus_leucogenys
ENSORLG00000008161	sltm	91	46.529	ENSODEG00000017077	SLTM	86	46.529	Octodon_degus
ENSORLG00000008161	sltm	100	70.987	ENSONIG00000005838	sltm	100	69.392	Oreochromis_niloticus
ENSORLG00000008161	sltm	95	42.611	ENSOCUG00000003327	SLTM	84	48.506	Oryctolagus_cuniculus
ENSORLG00000008161	sltm	100	99.273	ENSORLG00020008903	sltm	100	99.273	Oryzias_latipes_hni
ENSORLG00000008161	sltm	100	99.272	ENSORLG00015007103	sltm	100	99.272	Oryzias_latipes_hsok
ENSORLG00000008161	sltm	92	90.412	ENSOMEG00000002041	sltm	99	90.412	Oryzias_melastigma
ENSORLG00000008161	sltm	99	45.367	ENSPPAG00000029308	SLTM	99	44.772	Pan_paniscus
ENSORLG00000008161	sltm	91	46.429	ENSPPRG00000012400	SLTM	82	46.104	Panthera_pardus
ENSORLG00000008161	sltm	91	46.262	ENSPTIG00000021933	SLTM	82	45.937	Panthera_tigris_altaica
ENSORLG00000008161	sltm	99	45.130	ENSPTRG00000007121	SLTM	99	45.256	Pan_troglodytes
ENSORLG00000008161	sltm	99	44.455	ENSPANG00000017193	SLTM	99	44.592	Papio_anubis
ENSORLG00000008161	sltm	100	57.016	ENSPKIG00000022760	sltm	100	57.411	Paramormyrops_kingsleyae
ENSORLG00000008161	sltm	58	55.674	ENSPMGG00000006037	sltm	100	57.069	Periophthalmus_magnuspinnatus
ENSORLG00000008161	sltm	99	45.679	ENSPEMG00000013263	Sltm	83	46.063	Peromyscus_maniculatus_bairdii
ENSORLG00000008161	sltm	91	47.883	ENSPCIG00000028356	SLTM	82	47.340	Phascolarctos_cinereus
ENSORLG00000008161	sltm	99	76.404	ENSPFOG00000004372	sltm	100	69.413	Poecilia_formosa
ENSORLG00000008161	sltm	100	67.009	ENSPLAG00000008000	sltm	100	69.373	Poecilia_latipinna
ENSORLG00000008161	sltm	100	66.735	ENSPMEG00000006047	sltm	100	69.199	Poecilia_mexicana
ENSORLG00000008161	sltm	100	68.280	ENSPREG00000023236	sltm	100	69.270	Poecilia_reticulata
ENSORLG00000008161	sltm	91	43.716	ENSPCAG00000013482	SLTM	87	56.863	Procavia_capensis
ENSORLG00000008161	sltm	99	46.161	ENSPCOG00000010624	SLTM	99	45.128	Propithecus_coquereli
ENSORLG00000008161	sltm	100	71.486	ENSPNYG00000013893	sltm	100	69.392	Pundamilia_nyererei
ENSORLG00000008161	sltm	99	59.196	ENSPNAG00000020563	sltm	98	60.101	Pygocentrus_nattereri
ENSORLG00000008161	sltm	99	41.698	ENSRNOG00000054446	Sltm	83	44.697	Rattus_norvegicus
ENSORLG00000008161	sltm	95	45.399	ENSRBIG00000029226	SLTM	99	45.965	Rhinopithecus_bieti
ENSORLG00000008161	sltm	99	46.393	ENSRROG00000045301	SLTM	99	46.161	Rhinopithecus_roxellana
ENSORLG00000008161	sltm	99	46.706	ENSSBOG00000018883	SLTM	98	46.509	Saimiri_boliviensis_boliviensis
ENSORLG00000008161	sltm	95	45.491	ENSSHAG00000015395	SLTM	86	47.340	Sarcophilus_harrisii
ENSORLG00000008161	sltm	100	66.891	ENSSMAG00000000355	sltm	100	66.602	Scophthalmus_maximus
ENSORLG00000008161	sltm	100	69.891	ENSSDUG00000018134	sltm	100	70.553	Seriola_dumerili
ENSORLG00000008161	sltm	100	70.059	ENSSLDG00000013907	sltm	100	70.623	Seriola_lalandi_dorsalis
ENSORLG00000008161	sltm	100	70.378	ENSSPAG00000008130	sltm	100	71.318	Stegastes_partitus
ENSORLG00000008161	sltm	99	46.236	ENSSSCG00000004592	SLTM	99	45.759	Sus_scrofa
ENSORLG00000008161	sltm	90	46.037	ENSTGUG00000006017	SLTM	89	44.956	Taeniopygia_guttata
ENSORLG00000008161	sltm	87	59.441	ENSTRUG00000017767	sltm	85	61.870	Takifugu_rubripes
ENSORLG00000008161	sltm	99	55.162	ENSTNIG00000009334	sltm	99	53.876	Tetraodon_nigroviridis
ENSORLG00000008161	sltm	50	42.626	ENSTBEG00000000945	SLTM	87	43.450	Tupaia_belangeri
ENSORLG00000008161	sltm	82	48.746	ENSUAMG00000025901	SLTM	99	48.565	Ursus_americanus
ENSORLG00000008161	sltm	95	45.129	ENSUMAG00000023678	SLTM	99	48.865	Ursus_maritimus
ENSORLG00000008161	sltm	91	46.320	ENSVVUG00000001450	SLTM	79	60.526	Vulpes_vulpes
ENSORLG00000008161	sltm	99	44.583	ENSXETG00000010840	sltm	99	42.267	Xenopus_tropicalis
ENSORLG00000008161	sltm	100	66.393	ENSXMAG00000014466	sltm	100	68.275	Xiphophorus_maculatus