EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008175 (Gene tree)
Gene ID: 101175578
Gene Symbol: sf3a3
Alias: -
Full Name: splicing factor 3a subunit 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 11003 bases
Position: chr11:17926862-17937864
Accession: 101175578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000035944	SF3a60_bindingd	PF12108.8	1.5e-14	1	1
ENSORLP00000010268	SF3a60_bindingd	PF12108.8	1.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000040053	-	1854	-	ENSORLP00000035944	475 (aa)	-	-
ENSORLT00000010269	-	2031	XM_004074097	ENSORLP00000010268	501 (aa)	XP_004074145	H2LVY2

Gene Model

Click here to download ENSORLG00000008175's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008175	sf3a3	100	89.820	ENSG00000183431	SF3A3	100	89.820	Homo_sapiens
ENSORLG00000008175	sf3a3	100	95.808	ENSAPOG00000015608	sf3a3	100	95.808	Acanthochromis_polyacanthus
ENSORLG00000008175	sf3a3	100	89.820	ENSAMEG00000001262	SF3A3	100	89.820	Ailuropoda_melanoleuca
ENSORLG00000008175	sf3a3	95	88.955	ENSACIG00000009061	sf3a3	99	88.955	Amphilophus_citrinellus
ENSORLG00000008175	sf3a3	100	96.008	ENSAOCG00000013954	sf3a3	100	96.008	Amphiprion_ocellaris
ENSORLG00000008175	sf3a3	100	96.008	ENSAPEG00000007297	sf3a3	100	96.008	Amphiprion_percula
ENSORLG00000008175	sf3a3	100	96.008	ENSATEG00000008754	sf3a3	100	96.008	Anabas_testudineus
ENSORLG00000008175	sf3a3	99	89.979	ENSAPLG00000014900	SF3A3	100	89.979	Anas_platyrhynchos
ENSORLG00000008175	sf3a3	100	88.822	ENSACAG00000017058	SF3A3	100	88.822	Anolis_carolinensis
ENSORLG00000008175	sf3a3	99	89.765	ENSANAG00000014878	SF3A3	100	86.546	Aotus_nancymaae
ENSORLG00000008175	sf3a3	100	69.661	ENSANAG00000036903	-	100	69.661	Aotus_nancymaae
ENSORLG00000008175	sf3a3	100	95.609	ENSACLG00000017977	sf3a3	100	95.609	Astatotilapia_calliptera
ENSORLG00000008175	sf3a3	100	92.415	ENSAMXG00000016855	sf3a3	87	92.415	Astyanax_mexicanus
ENSORLG00000008175	sf3a3	100	89.820	ENSBTAG00000007299	SF3A3	100	89.820	Bos_taurus
ENSORLG00000008175	sf3a3	100	51.889	WBGene00011758	T13H5.4	100	51.889	Caenorhabditis_elegans
ENSORLG00000008175	sf3a3	100	89.820	ENSCJAG00000002176	SF3A3	100	89.820	Callithrix_jacchus
ENSORLG00000008175	sf3a3	100	89.820	ENSCAFG00000003222	-	100	89.820	Canis_familiaris
ENSORLG00000008175	sf3a3	100	89.820	ENSCAFG00000000683	-	100	89.820	Canis_familiaris
ENSORLG00000008175	sf3a3	100	89.820	ENSCAFG00020006186	SF3A3	100	89.820	Canis_lupus_dingo
ENSORLG00000008175	sf3a3	100	89.820	ENSCHIG00000020638	SF3A3	100	89.820	Capra_hircus
ENSORLG00000008175	sf3a3	100	83.832	ENSTSYG00000008417	SF3A3	100	83.832	Carlito_syrichta
ENSORLG00000008175	sf3a3	90	58.810	ENSCAPG00000003466	SF3A3	100	56.064	Cavia_aperea
ENSORLG00000008175	sf3a3	100	90.020	ENSCPOG00000008660	SF3A3	100	90.020	Cavia_porcellus
ENSORLG00000008175	sf3a3	100	64.271	ENSCCAG00000034048	-	100	61.277	Cebus_capucinus
ENSORLG00000008175	sf3a3	100	89.820	ENSCCAG00000033732	SF3A3	100	89.820	Cebus_capucinus
ENSORLG00000008175	sf3a3	100	67.131	ENSCATG00000043537	-	100	67.729	Cercocebus_atys
ENSORLG00000008175	sf3a3	100	89.820	ENSCATG00000043496	SF3A3	100	89.820	Cercocebus_atys
ENSORLG00000008175	sf3a3	94	72.708	ENSCATG00000041660	-	100	74.200	Cercocebus_atys
ENSORLG00000008175	sf3a3	100	90.419	ENSCLAG00000010838	SF3A3	100	90.419	Chinchilla_lanigera
ENSORLG00000008175	sf3a3	95	89.286	ENSCSAG00000001120	SF3A3	100	89.286	Chlorocebus_sabaeus
ENSORLG00000008175	sf3a3	78	86.243	ENSCHOG00000006849	SF3A3	79	86.243	Choloepus_hoffmanni
ENSORLG00000008175	sf3a3	100	82.036	ENSCPBG00000018291	-	100	82.036	Chrysemys_picta_bellii
ENSORLG00000008175	sf3a3	70	60.111	ENSCPBG00000007472	-	91	64.444	Chrysemys_picta_bellii
ENSORLG00000008175	sf3a3	100	67.131	ENSCING00000002730	-	100	67.131	Ciona_intestinalis
ENSORLG00000008175	sf3a3	100	65.868	ENSCSAVG00000005063	-	100	65.868	Ciona_savignyi
ENSORLG00000008175	sf3a3	100	89.820	ENSCANG00000042083	SF3A3	100	89.820	Colobus_angolensis_palliatus
ENSORLG00000008175	sf3a3	100	64.671	ENSCANG00000035535	-	100	64.671	Colobus_angolensis_palliatus
ENSORLG00000008175	sf3a3	100	90.619	ENSCGRG00001011320	Sf3a3	100	90.619	Cricetulus_griseus_chok1gshd
ENSORLG00000008175	sf3a3	100	90.619	ENSCGRG00000012156	Sf3a3	100	90.619	Cricetulus_griseus_crigri
ENSORLG00000008175	sf3a3	100	94.012	ENSCSEG00000010401	sf3a3	100	94.012	Cynoglossus_semilaevis
ENSORLG00000008175	sf3a3	100	93.684	ENSCVAG00000010239	sf3a3	96	94.080	Cyprinodon_variegatus
ENSORLG00000008175	sf3a3	100	92.216	ENSDARG00000100114	sf3a3	100	92.601	Danio_rerio
ENSORLG00000008175	sf3a3	91	89.278	ENSDNOG00000046628	SF3A3	99	89.278	Dasypus_novemcinctus
ENSORLG00000008175	sf3a3	100	90.020	ENSDORG00000008798	Sf3a3	100	90.020	Dipodomys_ordii
ENSORLG00000008175	sf3a3	100	64.229	FBgn0014366	noi	100	64.032	Drosophila_melanogaster
ENSORLG00000008175	sf3a3	100	77.336	ENSEBUG00000015411	sf3a3	92	77.734	Eptatretus_burgeri
ENSORLG00000008175	sf3a3	100	89.820	ENSEASG00005012906	SF3A3	100	89.820	Equus_asinus_asinus
ENSORLG00000008175	sf3a3	100	89.820	ENSECAG00000017333	SF3A3	100	89.820	Equus_caballus
ENSORLG00000008175	sf3a3	100	91.417	ENSELUG00000010024	sf3a3	100	91.417	Esox_lucius
ENSORLG00000008175	sf3a3	100	89.820	ENSFCAG00000027772	SF3A3	100	89.820	Felis_catus
ENSORLG00000008175	sf3a3	100	89.421	ENSFALG00000001003	SF3A3	100	89.421	Ficedula_albicollis
ENSORLG00000008175	sf3a3	100	90.020	ENSFDAG00000020908	SF3A3	100	90.020	Fukomys_damarensis
ENSORLG00000008175	sf3a3	100	96.208	ENSFHEG00000019107	sf3a3	100	96.208	Fundulus_heteroclitus
ENSORLG00000008175	sf3a3	100	91.018	ENSGMOG00000015540	sf3a3	100	91.018	Gadus_morhua
ENSORLG00000008175	sf3a3	100	89.222	ENSGALG00000001540	SF3A3	100	89.222	Gallus_gallus
ENSORLG00000008175	sf3a3	100	96.008	ENSGAFG00000002320	sf3a3	100	96.008	Gambusia_affinis
ENSORLG00000008175	sf3a3	100	94.611	ENSGACG00000007842	sf3a3	100	94.611	Gasterosteus_aculeatus
ENSORLG00000008175	sf3a3	100	89.820	ENSGAGG00000014980	SF3A3	100	89.820	Gopherus_agassizii
ENSORLG00000008175	sf3a3	100	69.461	ENSGGOG00000022611	-	100	69.062	Gorilla_gorilla
ENSORLG00000008175	sf3a3	100	89.820	ENSGGOG00000013928	SF3A3	100	89.820	Gorilla_gorilla
ENSORLG00000008175	sf3a3	100	95.609	ENSHBUG00000018158	sf3a3	100	95.833	Haplochromis_burtoni
ENSORLG00000008175	sf3a3	100	90.220	ENSHGLG00000012502	SF3A3	100	90.220	Heterocephalus_glaber_female
ENSORLG00000008175	sf3a3	100	90.220	ENSHGLG00100010546	SF3A3	100	90.220	Heterocephalus_glaber_male
ENSORLG00000008175	sf3a3	100	93.014	ENSHCOG00000015109	sf3a3	100	93.014	Hippocampus_comes
ENSORLG00000008175	sf3a3	100	92.415	ENSIPUG00000011603	sf3a3	100	92.415	Ictalurus_punctatus
ENSORLG00000008175	sf3a3	100	90.419	ENSSTOG00000001691	SF3A3	100	90.419	Ictidomys_tridecemlineatus
ENSORLG00000008175	sf3a3	100	90.220	ENSJJAG00000012404	Sf3a3	100	90.220	Jaculus_jaculus
ENSORLG00000008175	sf3a3	100	96.407	ENSKMAG00000007632	sf3a3	100	96.407	Kryptolebias_marmoratus
ENSORLG00000008175	sf3a3	100	86.853	ENSLBEG00000000816	sf3a3	100	87.302	Labrus_bergylta
ENSORLG00000008175	sf3a3	100	92.216	ENSLOCG00000003273	sf3a3	100	92.216	Lepisosteus_oculatus
ENSORLG00000008175	sf3a3	100	78.643	ENSLAFG00000008094	SF3A3	100	78.643	Loxodonta_africana
ENSORLG00000008175	sf3a3	94	71.642	ENSMFAG00000036706	-	100	73.348	Macaca_fascicularis
ENSORLG00000008175	sf3a3	100	89.820	ENSMFAG00000043047	SF3A3	100	89.820	Macaca_fascicularis
ENSORLG00000008175	sf3a3	100	70.659	ENSMMUG00000038820	-	100	72.255	Macaca_mulatta
ENSORLG00000008175	sf3a3	100	89.820	ENSMMUG00000023199	SF3A3	100	89.820	Macaca_mulatta
ENSORLG00000008175	sf3a3	94	69.723	ENSMNEG00000028686	-	100	71.429	Macaca_nemestrina
ENSORLG00000008175	sf3a3	100	89.820	ENSMNEG00000044291	SF3A3	100	89.820	Macaca_nemestrina
ENSORLG00000008175	sf3a3	100	66.534	ENSMLEG00000028631	-	100	67.131	Mandrillus_leucophaeus
ENSORLG00000008175	sf3a3	100	74.850	ENSMLEG00000036714	-	100	76.248	Mandrillus_leucophaeus
ENSORLG00000008175	sf3a3	100	89.820	ENSMLEG00000030641	SF3A3	100	89.820	Mandrillus_leucophaeus
ENSORLG00000008175	sf3a3	100	95.808	ENSMAMG00000001942	sf3a3	100	95.808	Mastacembelus_armatus
ENSORLG00000008175	sf3a3	100	95.609	ENSMZEG00005016987	sf3a3	100	95.609	Maylandia_zebra
ENSORLG00000008175	sf3a3	100	84.692	ENSMGAG00000002875	SF3A3	100	84.692	Meleagris_gallopavo
ENSORLG00000008175	sf3a3	100	86.228	ENSMICG00000001485	-	100	86.228	Microcebus_murinus
ENSORLG00000008175	sf3a3	100	84.631	ENSMICG00000043548	-	100	84.631	Microcebus_murinus
ENSORLG00000008175	sf3a3	91	87.555	ENSMICG00000026541	-	100	87.555	Microcebus_murinus
ENSORLG00000008175	sf3a3	100	88.423	ENSMOCG00000019939	-	100	88.423	Microtus_ochrogaster
ENSORLG00000008175	sf3a3	99	84.648	ENSMOCG00000014565	-	97	83.368	Microtus_ochrogaster
ENSORLG00000008175	sf3a3	100	95.210	ENSMMOG00000014307	sf3a3	100	95.210	Mola_mola
ENSORLG00000008175	sf3a3	100	83.433	ENSMODG00000024045	-	100	83.433	Monodelphis_domestica
ENSORLG00000008175	sf3a3	100	70.680	ENSMODG00000017729	-	100	69.691	Monodelphis_domestica
ENSORLG00000008175	sf3a3	100	95.010	ENSMALG00000004836	sf3a3	100	95.395	Monopterus_albus
ENSORLG00000008175	sf3a3	100	90.619	MGP_CAROLIEiJ_G0026449	Sf3a3	100	90.619	Mus_caroli
ENSORLG00000008175	sf3a3	100	90.619	ENSMUSG00000028902	Sf3a3	100	90.619	Mus_musculus
ENSORLG00000008175	sf3a3	100	85.230	MGP_PahariEiJ_G0028780	Sf3a3	100	85.230	Mus_pahari
ENSORLG00000008175	sf3a3	100	90.619	MGP_SPRETEiJ_G0027428	Sf3a3	100	90.619	Mus_spretus
ENSORLG00000008175	sf3a3	100	89.820	ENSMLUG00000000991	SF3A3	100	89.820	Myotis_lucifugus
ENSORLG00000008175	sf3a3	100	85.629	ENSNGAG00000018032	Sf3a3	100	85.629	Nannospalax_galili
ENSORLG00000008175	sf3a3	100	82.236	ENSNLEG00000011720	SF3A3	100	82.236	Nomascus_leucogenys
ENSORLG00000008175	sf3a3	100	90.220	ENSOPRG00000012785	SF3A3	100	90.220	Ochotona_princeps
ENSORLG00000008175	sf3a3	100	78.643	ENSODEG00000018393	-	100	78.443	Octodon_degus
ENSORLG00000008175	sf3a3	100	76.295	ENSODEG00000000937	-	100	78.685	Octodon_degus
ENSORLG00000008175	sf3a3	100	86.427	ENSODEG00000007470	-	100	86.427	Octodon_degus
ENSORLG00000008175	sf3a3	100	84.830	ENSODEG00000006854	-	100	87.425	Octodon_degus
ENSORLG00000008175	sf3a3	92	96.092	ENSONIG00000010296	sf3a3	100	96.092	Oreochromis_niloticus
ENSORLG00000008175	sf3a3	99	89.765	ENSOANG00000002473	SF3A3	100	89.765	Ornithorhynchus_anatinus
ENSORLG00000008175	sf3a3	100	90.220	ENSOCUG00000005407	SF3A3	100	90.220	Oryctolagus_cuniculus
ENSORLG00000008175	sf3a3	100	99.800	ENSORLG00020013708	sf3a3	100	99.800	Oryzias_latipes_hni
ENSORLG00000008175	sf3a3	100	99.601	ENSORLG00015004104	sf3a3	100	99.601	Oryzias_latipes_hsok
ENSORLG00000008175	sf3a3	100	98.603	ENSOMEG00000020177	sf3a3	100	98.603	Oryzias_melastigma
ENSORLG00000008175	sf3a3	100	89.820	ENSOARG00000019950	SF3A3	100	89.820	Ovis_aries
ENSORLG00000008175	sf3a3	100	89.820	ENSPPAG00000034066	SF3A3	100	89.820	Pan_paniscus
ENSORLG00000008175	sf3a3	100	68.862	ENSPPAG00000039955	-	100	68.463	Pan_paniscus
ENSORLG00000008175	sf3a3	100	89.820	ENSPPRG00000001258	SF3A3	100	89.820	Panthera_pardus
ENSORLG00000008175	sf3a3	100	89.820	ENSPTIG00000007515	SF3A3	100	89.820	Panthera_tigris_altaica
ENSORLG00000008175	sf3a3	100	69.860	ENSPTRG00000046013	-	100	69.461	Pan_troglodytes
ENSORLG00000008175	sf3a3	100	89.820	ENSPTRG00000000559	SF3A3	100	89.820	Pan_troglodytes
ENSORLG00000008175	sf3a3	100	89.820	ENSPANG00000021859	SF3A3	100	89.820	Papio_anubis
ENSORLG00000008175	sf3a3	100	77.246	ENSPANG00000029393	-	100	78.643	Papio_anubis
ENSORLG00000008175	sf3a3	87	81.818	ENSPANG00000031214	-	100	65.070	Papio_anubis
ENSORLG00000008175	sf3a3	100	92.216	ENSPKIG00000004719	sf3a3	100	92.216	Paramormyrops_kingsleyae
ENSORLG00000008175	sf3a3	100	87.674	ENSPSIG00000004273	SF3A3	100	87.674	Pelodiscus_sinensis
ENSORLG00000008175	sf3a3	91	94.748	ENSPMGG00000003610	sf3a3	94	94.748	Periophthalmus_magnuspinnatus
ENSORLG00000008175	sf3a3	100	90.619	ENSPEMG00000020805	Sf3a3	100	90.619	Peromyscus_maniculatus_bairdii
ENSORLG00000008175	sf3a3	54	76.296	ENSPMAG00000001044	sf3a3	98	76.296	Petromyzon_marinus
ENSORLG00000008175	sf3a3	100	90.020	ENSPCIG00000025719	SF3A3	100	90.020	Phascolarctos_cinereus
ENSORLG00000008175	sf3a3	100	96.208	ENSPFOG00000005284	sf3a3	100	96.208	Poecilia_formosa
ENSORLG00000008175	sf3a3	99	92.958	ENSPLAG00000003979	sf3a3	92	92.958	Poecilia_latipinna
ENSORLG00000008175	sf3a3	78	91.349	ENSPMEG00000021132	sf3a3	88	91.349	Poecilia_mexicana
ENSORLG00000008175	sf3a3	100	96.208	ENSPREG00000013802	sf3a3	100	96.208	Poecilia_reticulata
ENSORLG00000008175	sf3a3	100	87.425	ENSPPYG00000001519	SF3A3	100	87.425	Pongo_abelii
ENSORLG00000008175	sf3a3	100	83.633	ENSPCAG00000010734	SF3A3	100	83.633	Procavia_capensis
ENSORLG00000008175	sf3a3	100	74.251	ENSPCOG00000017131	-	100	74.251	Propithecus_coquereli
ENSORLG00000008175	sf3a3	100	79.167	ENSPCOG00000020389	-	100	79.167	Propithecus_coquereli
ENSORLG00000008175	sf3a3	100	78.643	ENSPVAG00000010158	SF3A3	100	78.643	Pteropus_vampyrus
ENSORLG00000008175	sf3a3	100	95.609	ENSPNYG00000000786	sf3a3	100	95.609	Pundamilia_nyererei
ENSORLG00000008175	sf3a3	100	92.814	ENSPNAG00000010298	sf3a3	100	92.814	Pygocentrus_nattereri
ENSORLG00000008175	sf3a3	100	90.619	ENSRNOG00000007629	Sf3a3	100	90.619	Rattus_norvegicus
ENSORLG00000008175	sf3a3	100	66.267	ENSRBIG00000043833	-	100	66.267	Rhinopithecus_bieti
ENSORLG00000008175	sf3a3	100	89.820	ENSRBIG00000043567	SF3A3	100	89.820	Rhinopithecus_bieti
ENSORLG00000008175	sf3a3	100	66.866	ENSRBIG00000041123	-	100	66.866	Rhinopithecus_bieti
ENSORLG00000008175	sf3a3	100	89.820	ENSRROG00000033888	SF3A3	100	89.820	Rhinopithecus_roxellana
ENSORLG00000008175	sf3a3	94	71.215	ENSRROG00000032346	-	100	71.215	Rhinopithecus_roxellana
ENSORLG00000008175	sf3a3	89	86.246	ENSSBOG00000032688	SF3A3	100	86.246	Saimiri_boliviensis_boliviensis
ENSORLG00000008175	sf3a3	100	65.269	ENSSBOG00000026932	-	100	64.271	Saimiri_boliviensis_boliviensis
ENSORLG00000008175	sf3a3	95	90.287	ENSSHAG00000014530	SF3A3	100	90.287	Sarcophilus_harrisii
ENSORLG00000008175	sf3a3	100	94.212	ENSSFOG00015005975	sf3a3	100	94.212	Scleropages_formosus
ENSORLG00000008175	sf3a3	100	95.210	ENSSMAG00000020213	sf3a3	100	95.210	Scophthalmus_maximus
ENSORLG00000008175	sf3a3	100	91.816	ENSSDUG00000011590	sf3a3	100	91.816	Seriola_dumerili
ENSORLG00000008175	sf3a3	100	96.208	ENSSLDG00000020635	sf3a3	100	96.208	Seriola_lalandi_dorsalis
ENSORLG00000008175	sf3a3	100	89.421	ENSSPUG00000004010	SF3A3	100	89.421	Sphenodon_punctatus
ENSORLG00000008175	sf3a3	100	96.208	ENSSPAG00000018653	sf3a3	100	96.208	Stegastes_partitus
ENSORLG00000008175	sf3a3	100	89.820	ENSSSCG00000003643	SF3A3	100	89.820	Sus_scrofa
ENSORLG00000008175	sf3a3	92	90.345	ENSTGUG00000001466	SF3A3	100	90.138	Taeniopygia_guttata
ENSORLG00000008175	sf3a3	100	94.810	ENSTRUG00000009089	sf3a3	100	94.810	Takifugu_rubripes
ENSORLG00000008175	sf3a3	100	94.433	ENSTNIG00000009800	sf3a3	100	94.433	Tetraodon_nigroviridis
ENSORLG00000008175	sf3a3	100	78.643	ENSTBEG00000007614	SF3A3	100	78.643	Tupaia_belangeri
ENSORLG00000008175	sf3a3	100	89.621	ENSTTRG00000013519	SF3A3	100	89.621	Tursiops_truncatus
ENSORLG00000008175	sf3a3	100	89.820	ENSUAMG00000006134	SF3A3	100	89.820	Ursus_americanus
ENSORLG00000008175	sf3a3	100	89.820	ENSUMAG00000021250	SF3A3	100	89.820	Ursus_maritimus
ENSORLG00000008175	sf3a3	69	95.349	ENSVPAG00000004778	SF3A3	73	95.349	Vicugna_pacos
ENSORLG00000008175	sf3a3	100	86.028	ENSVVUG00000022908	SF3A3	100	86.028	Vulpes_vulpes
ENSORLG00000008175	sf3a3	100	88.024	ENSXETG00000022923	sf3a3	100	88.024	Xenopus_tropicalis
ENSORLG00000008175	sf3a3	100	96.008	ENSXMAG00000017165	sf3a3	100	96.008	Xiphophorus_maculatus