EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000008221 (Gene tree)
Gene ID: 101163606
Gene Symbol: riok1
Alias: -
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 7240 bases
Position: chr17:13395089-13402328
Accession: 101163606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000026810	RIO1	PF01163.22	2.4e-73	1	1
ENSORLP00000010324	RIO1	PF01163.22	2.6e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000010325	-	1626	XM_004078884	ENSORLP00000010324	541 (aa)	XP_004078932	H2LW37
ENSORLT00000035237	-	1557	-	ENSORLP00000026810	518 (aa)	-	-

Gene Model

Click here to download ENSORLG00000008221's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000008221	riok1	56	44.068	ENSORLG00000003395	riok3	58	44.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008221	riok1	86	73.444	ENSG00000124784	RIOK1	98	66.071	Homo_sapiens
ENSORLG00000008221	riok1	57	77.994	ENSAPOG00000015632	riok1	99	77.994	Acanthochromis_polyacanthus
ENSORLG00000008221	riok1	86	74.322	ENSAMEG00000017367	RIOK1	98	67.025	Ailuropoda_melanoleuca
ENSORLG00000008221	riok1	89	82.365	ENSACIG00000003735	riok1	89	82.365	Amphilophus_citrinellus
ENSORLG00000008221	riok1	99	78.293	ENSAOCG00000011818	riok1	99	78.293	Amphiprion_ocellaris
ENSORLG00000008221	riok1	99	78.108	ENSAPEG00000001345	riok1	99	78.108	Amphiprion_percula
ENSORLG00000008221	riok1	84	80.973	ENSATEG00000006594	riok1	100	80.973	Anabas_testudineus
ENSORLG00000008221	riok1	85	73.941	ENSAPLG00000004196	RIOK1	100	73.729	Anas_platyrhynchos
ENSORLG00000008221	riok1	99	66.310	ENSACAG00000000695	RIOK1	98	65.714	Anolis_carolinensis
ENSORLG00000008221	riok1	86	63.071	ENSANAG00000023777	RIOK1	98	57.554	Aotus_nancymaae
ENSORLG00000008221	riok1	100	78.571	ENSACLG00000015799	riok1	100	78.571	Astatotilapia_calliptera
ENSORLG00000008221	riok1	99	71.404	ENSAMXG00000015286	riok1	98	71.404	Astyanax_mexicanus
ENSORLG00000008221	riok1	99	67.143	ENSBTAG00000013821	RIOK1	98	67.500	Bos_taurus
ENSORLG00000008221	riok1	79	48.546	WBGene00019698	riok-1	86	48.451	Caenorhabditis_elegans
ENSORLG00000008221	riok1	88	72.008	ENSCJAG00000042960	RIOK1	98	66.187	Callithrix_jacchus
ENSORLG00000008221	riok1	86	74.113	ENSCAFG00000009563	RIOK1	98	66.250	Canis_familiaris
ENSORLG00000008221	riok1	82	71.397	ENSCAFG00020013233	RIOK1	72	78.750	Canis_lupus_dingo
ENSORLG00000008221	riok1	86	73.444	ENSCHIG00000001534	RIOK1	98	67.143	Capra_hircus
ENSORLG00000008221	riok1	67	71.353	ENSTSYG00000011368	RIOK1	100	70.336	Carlito_syrichta
ENSORLG00000008221	riok1	80	73.051	ENSCAPG00000008489	RIOK1	99	72.786	Cavia_aperea
ENSORLG00000008221	riok1	84	73.077	ENSCPOG00000009882	RIOK1	98	66.667	Cavia_porcellus
ENSORLG00000008221	riok1	86	73.695	ENSCCAG00000024061	RIOK1	98	66.248	Cebus_capucinus
ENSORLG00000008221	riok1	86	73.859	ENSCATG00000001548	RIOK1	98	66.487	Cercocebus_atys
ENSORLG00000008221	riok1	86	73.444	ENSCLAG00000003522	RIOK1	98	66.547	Chinchilla_lanigera
ENSORLG00000008221	riok1	74	76.675	ENSCSAG00000007396	RIOK1	88	68.553	Chlorocebus_sabaeus
ENSORLG00000008221	riok1	64	84.103	ENSCHOG00000001873	RIOK1	64	84.103	Choloepus_hoffmanni
ENSORLG00000008221	riok1	87	70.551	ENSCPBG00000008685	RIOK1	82	71.308	Chrysemys_picta_bellii
ENSORLG00000008221	riok1	86	73.651	ENSCANG00000032919	RIOK1	98	65.827	Colobus_angolensis_palliatus
ENSORLG00000008221	riok1	99	64.903	ENSCGRG00001018868	Riok1	99	65.079	Cricetulus_griseus_chok1gshd
ENSORLG00000008221	riok1	99	64.903	ENSCGRG00000008015	Riok1	99	65.079	Cricetulus_griseus_crigri
ENSORLG00000008221	riok1	89	57.055	ENSCSEG00000015014	riok1	88	57.055	Cynoglossus_semilaevis
ENSORLG00000008221	riok1	57	71.698	ENSCVAG00000011291	riok1	99	71.111	Cyprinodon_variegatus
ENSORLG00000008221	riok1	99	70.163	ENSDARG00000016399	riok1	99	70.163	Danio_rerio
ENSORLG00000008221	riok1	99	67.082	ENSDNOG00000015813	RIOK1	98	67.673	Dasypus_novemcinctus
ENSORLG00000008221	riok1	99	66.310	ENSDORG00000008530	Riok1	98	67.380	Dipodomys_ordii
ENSORLG00000008221	riok1	79	53.201	FBgn0036187	RIOK1	82	52.147	Drosophila_melanogaster
ENSORLG00000008221	riok1	86	71.577	ENSETEG00000020273	RIOK1	98	66.065	Echinops_telfairi
ENSORLG00000008221	riok1	99	57.477	ENSEBUG00000013672	riok1	87	64.909	Eptatretus_burgeri
ENSORLG00000008221	riok1	81	71.778	ENSEASG00005012032	RIOK1	71	77.667	Equus_asinus_asinus
ENSORLG00000008221	riok1	86	74.274	ENSECAG00000009007	RIOK1	85	73.859	Equus_caballus
ENSORLG00000008221	riok1	79	61.136	ENSEEUG00000007123	RIOK1	90	65.239	Erinaceus_europaeus
ENSORLG00000008221	riok1	100	71.014	ENSELUG00000017029	riok1	100	71.739	Esox_lucius
ENSORLG00000008221	riok1	86	73.045	ENSFCAG00000027290	RIOK1	98	66.372	Felis_catus
ENSORLG00000008221	riok1	99	66.547	ENSFALG00000013244	RIOK1	98	67.086	Ficedula_albicollis
ENSORLG00000008221	riok1	88	71.457	ENSFDAG00000019139	RIOK1	98	66.132	Fukomys_damarensis
ENSORLG00000008221	riok1	82	80.189	ENSFHEG00000021419	riok1	99	85.348	Fundulus_heteroclitus
ENSORLG00000008221	riok1	75	78.811	ENSGMOG00000018668	riok1	96	78.756	Gadus_morhua
ENSORLG00000008221	riok1	58	66.154	ENSGALG00000012795	RIOK1	100	66.797	Gallus_gallus
ENSORLG00000008221	riok1	85	73.576	ENSGAFG00000004091	riok1	79	73.576	Gambusia_affinis
ENSORLG00000008221	riok1	97	80.080	ENSGACG00000002496	riok1	98	80.039	Gasterosteus_aculeatus
ENSORLG00000008221	riok1	82	70.737	ENSGAGG00000002262	RIOK1	97	70.087	Gopherus_agassizii
ENSORLG00000008221	riok1	86	69.214	ENSGGOG00000011037	RIOK1	98	62.243	Gorilla_gorilla
ENSORLG00000008221	riok1	88	71.429	ENSHGLG00000008699	RIOK1	98	66.607	Heterocephalus_glaber_female
ENSORLG00000008221	riok1	86	72.594	ENSHGLG00100008188	RIOK1	98	66.607	Heterocephalus_glaber_male
ENSORLG00000008221	riok1	89	76.735	ENSHCOG00000013275	riok1	92	76.735	Hippocampus_comes
ENSORLG00000008221	riok1	88	75.506	ENSIPUG00000003290	riok1	99	71.099	Ictalurus_punctatus
ENSORLG00000008221	riok1	86	74.066	ENSSTOG00000009289	RIOK1	98	67.563	Ictidomys_tridecemlineatus
ENSORLG00000008221	riok1	86	74.739	ENSJJAG00000015152	Riok1	98	66.966	Jaculus_jaculus
ENSORLG00000008221	riok1	72	84.576	ENSKMAG00000019378	riok1	100	84.576	Kryptolebias_marmoratus
ENSORLG00000008221	riok1	89	81.186	ENSLBEG00000016650	riok1	87	82.618	Labrus_bergylta
ENSORLG00000008221	riok1	88	64.286	ENSLACG00000000300	RIOK1	98	60.144	Latimeria_chalumnae
ENSORLG00000008221	riok1	99	71.841	ENSLOCG00000011728	riok1	99	71.480	Lepisosteus_oculatus
ENSORLG00000008221	riok1	99	66.726	ENSLAFG00000005504	RIOK1	98	67.450	Loxodonta_africana
ENSORLG00000008221	riok1	86	73.859	ENSMFAG00000029990	RIOK1	98	66.369	Macaca_fascicularis
ENSORLG00000008221	riok1	86	73.651	ENSMMUG00000015577	RIOK1	98	66.190	Macaca_mulatta
ENSORLG00000008221	riok1	86	70.851	ENSMNEG00000034396	RIOK1	97	68.132	Macaca_nemestrina
ENSORLG00000008221	riok1	86	74.066	ENSMLEG00000026327	RIOK1	98	66.667	Mandrillus_leucophaeus
ENSORLG00000008221	riok1	100	75.503	ENSMAMG00000019557	riok1	100	76.965	Mastacembelus_armatus
ENSORLG00000008221	riok1	100	78.832	ENSMZEG00005019482	riok1	100	78.755	Maylandia_zebra
ENSORLG00000008221	riok1	99	67.509	ENSMGAG00000003816	RIOK1	98	67.754	Meleagris_gallopavo
ENSORLG00000008221	riok1	99	66.725	ENSMAUG00000012751	Riok1	99	65.079	Mesocricetus_auratus
ENSORLG00000008221	riok1	86	73.444	ENSMICG00000044301	RIOK1	83	66.068	Microcebus_murinus
ENSORLG00000008221	riok1	99	64.632	ENSMOCG00000017032	Riok1	99	63.766	Microtus_ochrogaster
ENSORLG00000008221	riok1	85	71.660	ENSMMOG00000020598	riok1	87	72.065	Mola_mola
ENSORLG00000008221	riok1	99	67.558	ENSMODG00000009964	RIOK1	98	67.318	Monodelphis_domestica
ENSORLG00000008221	riok1	89	73.140	ENSMALG00000019982	riok1	92	72.878	Monopterus_albus
ENSORLG00000008221	riok1	99	65.775	MGP_CAROLIEiJ_G0018439	Riok1	98	65.664	Mus_caroli
ENSORLG00000008221	riok1	99	65.653	ENSMUSG00000021428	Riok1	99	65.542	Mus_musculus
ENSORLG00000008221	riok1	99	65.295	MGP_PahariEiJ_G0019507	Riok1	99	64.374	Mus_pahari
ENSORLG00000008221	riok1	99	67.082	MGP_SPRETEiJ_G0019319	Riok1	99	65.961	Mus_spretus
ENSORLG00000008221	riok1	99	66.905	ENSMPUG00000000570	RIOK1	98	67.380	Mustela_putorius_furo
ENSORLG00000008221	riok1	87	74.227	ENSMLUG00000015312	RIOK1	98	67.321	Myotis_lucifugus
ENSORLG00000008221	riok1	86	74.274	ENSNGAG00000021734	Riok1	98	66.905	Nannospalax_galili
ENSORLG00000008221	riok1	88	77.101	ENSNBRG00000017489	riok1	84	76.667	Neolamprologus_brichardi
ENSORLG00000008221	riok1	86	68.374	ENSNLEG00000011621	RIOK1	98	62.167	Nomascus_leucogenys
ENSORLG00000008221	riok1	77	57.605	ENSMEUG00000006679	-	73	57.605	Notamacropus_eugenii
ENSORLG00000008221	riok1	66	71.802	ENSOPRG00000009524	RIOK1	96	71.549	Ochotona_princeps
ENSORLG00000008221	riok1	60	68.065	ENSODEG00000005663	RIOK1	97	59.847	Octodon_degus
ENSORLG00000008221	riok1	100	77.717	ENSONIG00000014010	riok1	99	77.899	Oreochromis_niloticus
ENSORLG00000008221	riok1	83	74.624	ENSOANG00000012553	RIOK1	99	75.162	Ornithorhynchus_anatinus
ENSORLG00000008221	riok1	99	66.667	ENSOCUG00000011824	RIOK1	98	66.726	Oryctolagus_cuniculus
ENSORLG00000008221	riok1	99	98.643	ENSORLG00020013838	riok1	70	98.643	Oryzias_latipes_hni
ENSORLG00000008221	riok1	100	97.967	ENSORLG00015009817	riok1	99	97.967	Oryzias_latipes_hsok
ENSORLG00000008221	riok1	100	92.791	ENSOMEG00000002758	riok1	89	92.052	Oryzias_melastigma
ENSORLG00000008221	riok1	86	68.143	ENSOGAG00000010192	RIOK1	98	63.110	Otolemur_garnettii
ENSORLG00000008221	riok1	99	66.200	ENSOARG00000017747	RIOK1	98	67.143	Ovis_aries
ENSORLG00000008221	riok1	86	64.124	ENSPPAG00000016349	RIOK1	100	66.458	Pan_paniscus
ENSORLG00000008221	riok1	86	73.278	ENSPPRG00000001932	RIOK1	98	66.250	Panthera_pardus
ENSORLG00000008221	riok1	86	73.486	ENSPTIG00000018545	RIOK1	98	66.429	Panthera_tigris_altaica
ENSORLG00000008221	riok1	86	73.651	ENSPTRG00000017700	RIOK1	98	66.250	Pan_troglodytes
ENSORLG00000008221	riok1	86	73.859	ENSPANG00000016522	RIOK1	98	66.369	Papio_anubis
ENSORLG00000008221	riok1	99	69.636	ENSPKIG00000006442	riok1	99	72.313	Paramormyrops_kingsleyae
ENSORLG00000008221	riok1	88	73.631	ENSPSIG00000006488	RIOK1	97	67.928	Pelodiscus_sinensis
ENSORLG00000008221	riok1	73	79.747	ENSPMGG00000017807	riok1	96	74.373	Periophthalmus_magnuspinnatus
ENSORLG00000008221	riok1	99	66.786	ENSPEMG00000017844	Riok1	98	65.597	Peromyscus_maniculatus_bairdii
ENSORLG00000008221	riok1	77	65.942	ENSPMAG00000006351	riok1	98	65.700	Petromyzon_marinus
ENSORLG00000008221	riok1	79	72.854	ENSPCIG00000012653	RIOK1	85	68.828	Phascolarctos_cinereus
ENSORLG00000008221	riok1	100	74.677	ENSPFOG00000011532	riok1	100	75.231	Poecilia_formosa
ENSORLG00000008221	riok1	100	74.492	ENSPLAG00000001341	riok1	100	75.046	Poecilia_latipinna
ENSORLG00000008221	riok1	100	74.677	ENSPMEG00000007710	riok1	100	75.231	Poecilia_mexicana
ENSORLG00000008221	riok1	100	73.383	ENSPREG00000009237	riok1	100	73.752	Poecilia_reticulata
ENSORLG00000008221	riok1	86	73.651	ENSPPYG00000016207	RIOK1	98	66.190	Pongo_abelii
ENSORLG00000008221	riok1	99	56.216	ENSPCAG00000007892	RIOK1	98	56.884	Procavia_capensis
ENSORLG00000008221	riok1	88	73.374	ENSPVAG00000014091	RIOK1	98	66.786	Pteropus_vampyrus
ENSORLG00000008221	riok1	58	82.109	ENSPNYG00000004465	riok1	100	82.109	Pundamilia_nyererei
ENSORLG00000008221	riok1	99	70.397	ENSPNAG00000015435	riok1	98	72.202	Pygocentrus_nattereri
ENSORLG00000008221	riok1	99	65.658	ENSRNOG00000014049	Riok1	99	73.002	Rattus_norvegicus
ENSORLG00000008221	riok1	86	73.444	ENSRBIG00000036685	RIOK1	98	65.530	Rhinopithecus_bieti
ENSORLG00000008221	riok1	86	73.651	ENSRROG00000036611	RIOK1	98	65.709	Rhinopithecus_roxellana
ENSORLG00000008221	riok1	67	38.770	YOR119C	RIO1	97	36.179	Saccharomyces_cerevisiae
ENSORLG00000008221	riok1	86	73.859	ENSSBOG00000012588	RIOK1	98	66.786	Saimiri_boliviensis_boliviensis
ENSORLG00000008221	riok1	75	75.676	ENSSHAG00000003091	RIOK1	91	69.851	Sarcophilus_harrisii
ENSORLG00000008221	riok1	88	76.230	ENSSFOG00015001035	riok1	99	72.414	Scleropages_formosus
ENSORLG00000008221	riok1	58	77.070	ENSSDUG00000007291	riok1	100	78.146	Seriola_dumerili
ENSORLG00000008221	riok1	100	79.228	ENSSLDG00000017657	riok1	100	79.412	Seriola_lalandi_dorsalis
ENSORLG00000008221	riok1	84	64.208	ENSSPUG00000007624	RIOK1	82	63.554	Sphenodon_punctatus
ENSORLG00000008221	riok1	99	79.104	ENSSPAG00000022710	riok1	99	79.104	Stegastes_partitus
ENSORLG00000008221	riok1	99	65.827	ENSSSCG00000001024	RIOK1	98	66.187	Sus_scrofa
ENSORLG00000008221	riok1	88	71.951	ENSTGUG00000002331	RIOK1	98	66.667	Taeniopygia_guttata
ENSORLG00000008221	riok1	80	67.202	ENSTRUG00000002854	riok1	95	68.638	Takifugu_rubripes
ENSORLG00000008221	riok1	52	70.526	ENSTRUG00000001575	-	100	70.175	Takifugu_rubripes
ENSORLG00000008221	riok1	100	65.714	ENSTNIG00000003078	riok1	99	65.658	Tetraodon_nigroviridis
ENSORLG00000008221	riok1	86	69.087	ENSTBEG00000016730	RIOK1	98	63.327	Tupaia_belangeri
ENSORLG00000008221	riok1	72	78.351	ENSTTRG00000017335	RIOK1	81	78.351	Tursiops_truncatus
ENSORLG00000008221	riok1	92	65.517	ENSUAMG00000003721	RIOK1	86	69.520	Ursus_americanus
ENSORLG00000008221	riok1	86	74.530	ENSUMAG00000018461	RIOK1	98	67.204	Ursus_maritimus
ENSORLG00000008221	riok1	64	76.987	ENSVPAG00000010813	-	64	75.820	Vicugna_pacos
ENSORLG00000008221	riok1	86	74.739	ENSVVUG00000005018	RIOK1	98	66.964	Vulpes_vulpes
ENSORLG00000008221	riok1	79	74.541	ENSXETG00000020436	riok1	79	74.541	Xenopus_tropicalis
ENSORLG00000008221	riok1	85	74.620	ENSXCOG00000000245	riok1	100	75.271	Xiphophorus_couchianus
ENSORLG00000008221	riok1	87	75.476	ENSXMAG00000014572	riok1	92	75.208	Xiphophorus_maculatus