EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008228 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 1947 bases
Position: chr16:16781390-16783336
Accession: ZDB-GENE-030131-6428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010331	RRM_1	PF00076.22	2.2e-36	1	3
ENSORLP00000010331	RRM_1	PF00076.22	2.2e-36	2	3
ENSORLP00000010331	RRM_1	PF00076.22	2.2e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000010332	-	1947	-	ENSORLP00000010331	648 (aa)	-	H2LW44

Gene Model

Click here to download ENSORLG00000008228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008228	rbm12b	83	48.052	ENSG00000183808	RBM12B	98	75.000	Homo_sapiens
ENSORLG00000008228	rbm12b	97	63.067	ENSAPOG00000013963	rbm12b	100	62.911	Acanthochromis_polyacanthus
ENSORLG00000008228	rbm12b	83	46.753	ENSAMEG00000007134	RBM12B	66	46.753	Ailuropoda_melanoleuca
ENSORLG00000008228	rbm12b	84	61.407	ENSACIG00000014943	rbm12b	97	62.542	Amphilophus_citrinellus
ENSORLG00000008228	rbm12b	97	63.693	ENSAOCG00000024270	rbm12b	100	63.537	Amphiprion_ocellaris
ENSORLG00000008228	rbm12b	96	40.845	ENSAPEG00000022079	rbm12b	99	58.224	Amphiprion_percula
ENSORLG00000008228	rbm12b	100	61.457	ENSATEG00000004578	rbm12b	100	61.305	Anabas_testudineus
ENSORLG00000008228	rbm12b	73	53.086	ENSATEG00000001886	zgc:153215	81	47.706	Anabas_testudineus
ENSORLG00000008228	rbm12b	98	71.591	ENSAPLG00000002020	RBM12B	100	36.775	Anas_platyrhynchos
ENSORLG00000008228	rbm12b	83	46.753	ENSACAG00000003463	RBM12B	56	46.753	Anolis_carolinensis
ENSORLG00000008228	rbm12b	83	48.052	ENSANAG00000034015	RBM12B	67	48.052	Aotus_nancymaae
ENSORLG00000008228	rbm12b	97	53.788	ENSACLG00000005578	rbm12b	100	53.788	Astatotilapia_calliptera
ENSORLG00000008228	rbm12b	98	62.578	ENSACLG00000005575	rbm12b	98	62.578	Astatotilapia_calliptera
ENSORLG00000008228	rbm12b	72	51.429	ENSAMXG00000020853	zgc:153215	73	51.429	Astyanax_mexicanus
ENSORLG00000008228	rbm12b	97	43.731	ENSAMXG00000041973	rbm12b	100	44.495	Astyanax_mexicanus
ENSORLG00000008228	rbm12b	84	49.351	ENSBTAG00000013408	RBM12B	65	49.351	Bos_taurus
ENSORLG00000008228	rbm12b	83	46.753	ENSCAFG00000009109	RBM12B	56	46.753	Canis_familiaris
ENSORLG00000008228	rbm12b	83	46.753	ENSCAFG00020012203	RBM12B	64	46.753	Canis_lupus_dingo
ENSORLG00000008228	rbm12b	72	38.493	ENSCHIG00000006790	RBM12B	67	38.493	Capra_hircus
ENSORLG00000008228	rbm12b	83	48.052	ENSTSYG00000012515	RBM12B	57	48.052	Carlito_syrichta
ENSORLG00000008228	rbm12b	85	50.649	ENSCAPG00000003543	RBM12B	63	50.649	Cavia_aperea
ENSORLG00000008228	rbm12b	85	50.649	ENSCPOG00000007815	RBM12B	63	50.649	Cavia_porcellus
ENSORLG00000008228	rbm12b	83	48.052	ENSCATG00000030769	RBM12B	65	48.052	Cercocebus_atys
ENSORLG00000008228	rbm12b	85	50.649	ENSCLAG00000017617	RBM12B	60	50.649	Chinchilla_lanigera
ENSORLG00000008228	rbm12b	83	48.052	ENSCSAG00000018559	RBM12B	56	48.052	Chlorocebus_sabaeus
ENSORLG00000008228	rbm12b	81	42.857	ENSCHOG00000008934	RBM12B	58	42.857	Choloepus_hoffmanni
ENSORLG00000008228	rbm12b	97	35.983	ENSCPBG00000003061	RBM12B	100	35.983	Chrysemys_picta_bellii
ENSORLG00000008228	rbm12b	85	48.052	ENSCANG00000030379	RBM12B	67	48.052	Colobus_angolensis_palliatus
ENSORLG00000008228	rbm12b	83	51.948	ENSCGRG00001008710	-	65	51.948	Cricetulus_griseus_chok1gshd
ENSORLG00000008228	rbm12b	98	55.789	ENSCSEG00000004610	rbm12b	98	55.789	Cynoglossus_semilaevis
ENSORLG00000008228	rbm12b	52	31.445	ENSCSEG00000001575	-	98	31.445	Cynoglossus_semilaevis
ENSORLG00000008228	rbm12b	95	40.099	ENSCVAG00000009259	-	99	40.099	Cyprinodon_variegatus
ENSORLG00000008228	rbm12b	97	58.814	ENSCVAG00000011047	rbm12b	100	58.814	Cyprinodon_variegatus
ENSORLG00000008228	rbm12b	97	40.673	ENSDARG00000079717	rbm12b	100	43.040	Danio_rerio
ENSORLG00000008228	rbm12b	63	56.627	ENSDARG00000055889	zgc:153215	78	56.627	Danio_rerio
ENSORLG00000008228	rbm12b	83	49.351	ENSDNOG00000041608	RBM12B	56	49.351	Dasypus_novemcinctus
ENSORLG00000008228	rbm12b	83	49.351	ENSDORG00000024034	-	60	49.351	Dipodomys_ordii
ENSORLG00000008228	rbm12b	73	38.583	ENSETEG00000013005	-	67	38.583	Echinops_telfairi
ENSORLG00000008228	rbm12b	72	32.627	ENSEBUG00000004292	-	82	32.627	Eptatretus_burgeri
ENSORLG00000008228	rbm12b	83	49.351	ENSEASG00005016297	RBM12B	64	49.351	Equus_asinus_asinus
ENSORLG00000008228	rbm12b	83	49.351	ENSECAG00000017870	RBM12B	57	49.351	Equus_caballus
ENSORLG00000008228	rbm12b	83	46.753	ENSFCAG00000029274	RBM12B	65	46.753	Felis_catus
ENSORLG00000008228	rbm12b	97	36.630	ENSFALG00000014893	RBM12B	100	37.187	Ficedula_albicollis
ENSORLG00000008228	rbm12b	85	50.649	ENSFDAG00000005576	RBM12B	59	50.649	Fukomys_damarensis
ENSORLG00000008228	rbm12b	97	61.180	ENSFHEG00000016425	rbm12b	100	61.180	Fundulus_heteroclitus
ENSORLG00000008228	rbm12b	97	53.208	ENSGMOG00000013467	rbm12b	100	53.052	Gadus_morhua
ENSORLG00000008228	rbm12b	97	73.810	ENSGALG00000035129	RBM12B	100	37.344	Gallus_gallus
ENSORLG00000008228	rbm12b	97	63.975	ENSGAFG00000007224	rbm12b	100	64.163	Gambusia_affinis
ENSORLG00000008228	rbm12b	70	30.392	ENSGAFG00000007845	zgc:153215	98	30.392	Gambusia_affinis
ENSORLG00000008228	rbm12b	97	57.609	ENSGACG00000008682	rbm12b	99	57.453	Gasterosteus_aculeatus
ENSORLG00000008228	rbm12b	97	36.052	ENSGAGG00000009774	RBM12B	100	36.040	Gopherus_agassizii
ENSORLG00000008228	rbm12b	83	46.753	ENSGGOG00000011909	RBM12B	64	46.753	Gorilla_gorilla
ENSORLG00000008228	rbm12b	72	48.810	ENSHBUG00000016150	zgc:153215	78	48.810	Haplochromis_burtoni
ENSORLG00000008228	rbm12b	97	60.916	ENSHBUG00000016227	rbm12b	100	60.611	Haplochromis_burtoni
ENSORLG00000008228	rbm12b	85	50.649	ENSHGLG00000009063	RBM12B	60	50.649	Heterocephalus_glaber_female
ENSORLG00000008228	rbm12b	85	50.649	ENSHGLG00100021324	RBM12B	60	50.649	Heterocephalus_glaber_male
ENSORLG00000008228	rbm12b	97	50.390	ENSHCOG00000014952	rbm12b	100	50.390	Hippocampus_comes
ENSORLG00000008228	rbm12b	70	49.020	ENSIPUG00000019731	zgc:153215	87	49.020	Ictalurus_punctatus
ENSORLG00000008228	rbm12b	99	42.563	ENSIPUG00000001167	RBM12B	99	42.563	Ictalurus_punctatus
ENSORLG00000008228	rbm12b	83	50.649	ENSSTOG00000027445	RBM12B	67	50.649	Ictidomys_tridecemlineatus
ENSORLG00000008228	rbm12b	83	49.351	ENSJJAG00000004165	-	64	49.351	Jaculus_jaculus
ENSORLG00000008228	rbm12b	98	57.788	ENSKMAG00000013704	rbm12b	97	57.788	Kryptolebias_marmoratus
ENSORLG00000008228	rbm12b	71	30.689	ENSKMAG00000004958	zgc:153215	99	30.689	Kryptolebias_marmoratus
ENSORLG00000008228	rbm12b	97	57.771	ENSKMAG00000013715	rbm12b	99	57.771	Kryptolebias_marmoratus
ENSORLG00000008228	rbm12b	72	30.784	ENSLBEG00000002597	zgc:153215	99	30.994	Labrus_bergylta
ENSORLG00000008228	rbm12b	97	79.762	ENSLACG00000007177	RBM12B	100	38.549	Latimeria_chalumnae
ENSORLG00000008228	rbm12b	98	48.605	ENSLOCG00000018344	rbm12b	100	48.088	Lepisosteus_oculatus
ENSORLG00000008228	rbm12b	83	48.052	ENSLAFG00000029949	RBM12B	66	48.052	Loxodonta_africana
ENSORLG00000008228	rbm12b	83	48.052	ENSMFAG00000045430	RBM12B	65	48.052	Macaca_fascicularis
ENSORLG00000008228	rbm12b	83	48.052	ENSMMUG00000005558	RBM12B	64	48.052	Macaca_mulatta
ENSORLG00000008228	rbm12b	83	48.052	ENSMNEG00000041292	RBM12B	65	48.052	Macaca_nemestrina
ENSORLG00000008228	rbm12b	83	48.052	ENSMLEG00000037288	RBM12B	63	48.052	Mandrillus_leucophaeus
ENSORLG00000008228	rbm12b	72	53.571	ENSMAMG00000012038	zgc:153215	79	53.571	Mastacembelus_armatus
ENSORLG00000008228	rbm12b	97	61.912	ENSMAMG00000011998	rbm12b	100	61.934	Mastacembelus_armatus
ENSORLG00000008228	rbm12b	71	48.810	ENSMZEG00005005435	zgc:153215	77	48.810	Maylandia_zebra
ENSORLG00000008228	rbm12b	97	62.441	ENSMZEG00005015005	rbm12b	100	62.441	Maylandia_zebra
ENSORLG00000008228	rbm12b	99	59.571	ENSMZEG00005014845	rbm12b	99	60.220	Maylandia_zebra
ENSORLG00000008228	rbm12b	71	73.810	ENSMGAG00000011985	RBM12B	80	73.810	Meleagris_gallopavo
ENSORLG00000008228	rbm12b	83	51.948	ENSMAUG00000021752	-	67	51.948	Mesocricetus_auratus
ENSORLG00000008228	rbm12b	83	49.351	ENSMICG00000036969	RBM12B	66	49.351	Microcebus_murinus
ENSORLG00000008228	rbm12b	83	50.649	ENSMOCG00000005603	-	67	50.649	Microtus_ochrogaster
ENSORLG00000008228	rbm12b	98	59.148	ENSMMOG00000002404	rbm12b	95	59.148	Mola_mola
ENSORLG00000008228	rbm12b	63	35.417	ENSMMOG00000003372	zgc:153215	99	35.417	Mola_mola
ENSORLG00000008228	rbm12b	98	36.508	ENSMODG00000007436	RBM12B	83	41.961	Monodelphis_domestica
ENSORLG00000008228	rbm12b	72	31.746	ENSMALG00000001222	zgc:153215	98	31.746	Monopterus_albus
ENSORLG00000008228	rbm12b	97	59.565	ENSMALG00000012059	rbm12b	100	59.565	Monopterus_albus
ENSORLG00000008228	rbm12b	83	49.333	ENSMUSG00000052137	Rbm12b2	67	49.333	Mus_musculus
ENSORLG00000008228	rbm12b	84	50.667	ENSMUSG00000046667	Rbm12b1	68	50.667	Mus_musculus
ENSORLG00000008228	rbm12b	84	49.333	MGP_SPRETEiJ_G0026766	-	68	49.333	Mus_spretus
ENSORLG00000008228	rbm12b	84	49.333	MGP_SPRETEiJ_G0026765	-	62	49.333	Mus_spretus
ENSORLG00000008228	rbm12b	83	49.351	ENSMPUG00000018637	RBM12B	56	49.351	Mustela_putorius_furo
ENSORLG00000008228	rbm12b	83	48.052	ENSMLUG00000002359	RBM12B	59	48.052	Myotis_lucifugus
ENSORLG00000008228	rbm12b	83	46.753	ENSNGAG00000002801	-	61	46.753	Nannospalax_galili
ENSORLG00000008228	rbm12b	72	47.619	ENSNBRG00000013644	zgc:153215	78	47.619	Neolamprologus_brichardi
ENSORLG00000008228	rbm12b	97	63.693	ENSNBRG00000015057	rbm12b	100	63.693	Neolamprologus_brichardi
ENSORLG00000008228	rbm12b	83	48.052	ENSNLEG00000032050	RBM12B	63	48.052	Nomascus_leucogenys
ENSORLG00000008228	rbm12b	85	50.649	ENSODEG00000019204	RBM12B	60	50.649	Octodon_degus
ENSORLG00000008228	rbm12b	97	64.632	ENSONIG00000020612	rbm12b	100	64.632	Oreochromis_niloticus
ENSORLG00000008228	rbm12b	98	37.143	ENSOANG00000015735	-	98	36.953	Ornithorhynchus_anatinus
ENSORLG00000008228	rbm12b	83	49.351	ENSOCUG00000010353	RBM12B	64	49.351	Oryctolagus_cuniculus
ENSORLG00000008228	rbm12b	100	99.537	ENSORLG00020013619	rbm12b	100	99.537	Oryzias_latipes_hni
ENSORLG00000008228	rbm12b	100	99.691	ENSORLG00015019999	rbm12b	100	99.691	Oryzias_latipes_hsok
ENSORLG00000008228	rbm12b	100	87.481	ENSOMEG00000022523	rbm12b	100	87.481	Oryzias_melastigma
ENSORLG00000008228	rbm12b	71	30.454	ENSOMEG00000004220	zgc:153215	96	31.197	Oryzias_melastigma
ENSORLG00000008228	rbm12b	83	49.351	ENSOGAG00000002979	RBM12B	57	49.351	Otolemur_garnettii
ENSORLG00000008228	rbm12b	83	46.753	ENSPTIG00000020071	RBM12B	65	46.753	Panthera_tigris_altaica
ENSORLG00000008228	rbm12b	83	48.052	ENSPTRG00000020420	RBM12B	64	48.052	Pan_troglodytes
ENSORLG00000008228	rbm12b	83	48.052	ENSPANG00000035535	RBM12B	63	48.052	Papio_anubis
ENSORLG00000008228	rbm12b	98	45.808	ENSPKIG00000018719	rbm12b	99	44.978	Paramormyrops_kingsleyae
ENSORLG00000008228	rbm12b	71	32.008	ENSPKIG00000014851	zgc:153215	99	32.008	Paramormyrops_kingsleyae
ENSORLG00000008228	rbm12b	98	36.864	ENSPSIG00000001348	RBM12B	100	36.723	Pelodiscus_sinensis
ENSORLG00000008228	rbm12b	66	49.840	ENSPMGG00000012348	-	97	49.840	Periophthalmus_magnuspinnatus
ENSORLG00000008228	rbm12b	83	51.948	ENSPEMG00000008279	-	67	51.948	Peromyscus_maniculatus_bairdii
ENSORLG00000008228	rbm12b	97	36.592	ENSPCIG00000008556	RBM12B	85	41.454	Phascolarctos_cinereus
ENSORLG00000008228	rbm12b	71	40.909	ENSPFOG00000017451	zgc:153215	73	40.909	Poecilia_formosa
ENSORLG00000008228	rbm12b	98	62.830	ENSPFOG00000020937	rbm12b	97	62.830	Poecilia_formosa
ENSORLG00000008228	rbm12b	71	31.237	ENSPLAG00000000232	zgc:153215	99	31.237	Poecilia_latipinna
ENSORLG00000008228	rbm12b	97	63.850	ENSPLAG00000018782	rbm12b	100	63.850	Poecilia_latipinna
ENSORLG00000008228	rbm12b	71	30.335	ENSPMEG00000016662	zgc:153215	99	30.335	Poecilia_mexicana
ENSORLG00000008228	rbm12b	97	63.380	ENSPMEG00000011418	rbm12b	100	63.380	Poecilia_mexicana
ENSORLG00000008228	rbm12b	71	30.572	ENSPREG00000018608	zgc:153215	99	30.572	Poecilia_reticulata
ENSORLG00000008228	rbm12b	97	63.820	ENSPREG00000020770	rbm12b	100	64.219	Poecilia_reticulata
ENSORLG00000008228	rbm12b	83	48.052	ENSPPYG00000018745	RBM12B	56	48.052	Pongo_abelii
ENSORLG00000008228	rbm12b	83	48.052	ENSPCOG00000023546	RBM12B	64	48.052	Propithecus_coquereli
ENSORLG00000008228	rbm12b	83	49.351	ENSPVAG00000011803	RBM12B	60	49.351	Pteropus_vampyrus
ENSORLG00000008228	rbm12b	97	62.598	ENSPNYG00000016696	rbm12b	100	62.598	Pundamilia_nyererei
ENSORLG00000008228	rbm12b	64	55.952	ENSPNAG00000025628	zgc:153215	75	55.952	Pygocentrus_nattereri
ENSORLG00000008228	rbm12b	97	43.556	ENSPNAG00000008126	rbm12b	99	43.668	Pygocentrus_nattereri
ENSORLG00000008228	rbm12b	83	49.333	ENSRNOG00000016330	Rbm12b	66	49.333	Rattus_norvegicus
ENSORLG00000008228	rbm12b	71	38.264	ENSRNOG00000055292	LOC679087	65	38.264	Rattus_norvegicus
ENSORLG00000008228	rbm12b	83	48.052	ENSRBIG00000035046	RBM12B	64	48.052	Rhinopithecus_bieti
ENSORLG00000008228	rbm12b	83	48.052	ENSRROG00000023660	RBM12B	67	48.052	Rhinopithecus_roxellana
ENSORLG00000008228	rbm12b	83	48.052	ENSSBOG00000027592	RBM12B	63	48.052	Saimiri_boliviensis_boliviensis
ENSORLG00000008228	rbm12b	97	36.243	ENSSHAG00000015335	RBM12B	85	41.142	Sarcophilus_harrisii
ENSORLG00000008228	rbm12b	71	34.455	ENSSFOG00015009427	zgc:153215	99	34.455	Scleropages_formosus
ENSORLG00000008228	rbm12b	98	44.889	ENSSFOG00015001584	rbm12b	100	44.925	Scleropages_formosus
ENSORLG00000008228	rbm12b	97	60.407	ENSSMAG00000019708	rbm12b	100	60.407	Scophthalmus_maximus
ENSORLG00000008228	rbm12b	72	30.196	ENSSMAG00000019013	zgc:153215	97	30.392	Scophthalmus_maximus
ENSORLG00000008228	rbm12b	97	62.253	ENSSDUG00000006856	rbm12b	100	62.253	Seriola_dumerili
ENSORLG00000008228	rbm12b	71	54.321	ENSSLDG00000013581	zgc:153215	76	53.571	Seriola_lalandi_dorsalis
ENSORLG00000008228	rbm12b	97	62.405	ENSSLDG00000016156	rbm12b	100	62.405	Seriola_lalandi_dorsalis
ENSORLG00000008228	rbm12b	83	36.979	ENSSARG00000011845	-	78	36.979	Sorex_araneus
ENSORLG00000008228	rbm12b	71	37.500	ENSSPUG00000016954	RBM12B	90	38.269	Sphenodon_punctatus
ENSORLG00000008228	rbm12b	71	31.453	ENSSPAG00000023584	zgc:153215	98	31.102	Stegastes_partitus
ENSORLG00000008228	rbm12b	97	64.632	ENSSPAG00000006774	rbm12b	100	64.476	Stegastes_partitus
ENSORLG00000008228	rbm12b	83	48.000	ENSSSCG00000006110	RBM12B	57	48.000	Sus_scrofa
ENSORLG00000008228	rbm12b	71	39.442	ENSTGUG00000011860	RBM12B	95	39.442	Taeniopygia_guttata
ENSORLG00000008228	rbm12b	97	54.446	ENSTRUG00000013738	rbm12b	100	54.037	Takifugu_rubripes
ENSORLG00000008228	rbm12b	53	30.435	ENSTNIG00000018374	-	98	30.127	Tetraodon_nigroviridis
ENSORLG00000008228	rbm12b	81	36.092	ENSTBEG00000000449	RBM12B	64	37.911	Tupaia_belangeri
ENSORLG00000008228	rbm12b	83	48.052	ENSUAMG00000023639	RBM12B	63	48.052	Ursus_americanus
ENSORLG00000008228	rbm12b	83	48.052	ENSUMAG00000016008	RBM12B	61	48.052	Ursus_maritimus
ENSORLG00000008228	rbm12b	83	46.753	ENSVVUG00000002694	RBM12B	64	46.753	Vulpes_vulpes
ENSORLG00000008228	rbm12b	75	33.881	ENSXETG00000014696	rbm12b	70	34.096	Xenopus_tropicalis
ENSORLG00000008228	rbm12b	97	37.425	ENSXETG00000014694	rbm12b	99	40.517	Xenopus_tropicalis
ENSORLG00000008228	rbm12b	69	60.197	ENSXCOG00000019735	-	99	60.197	Xiphophorus_couchianus
ENSORLG00000008228	rbm12b	97	64.219	ENSXMAG00000014213	rbm12b	100	64.219	Xiphophorus_maculatus