EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008235 (Gene tree)
Gene ID: 101159948
Gene Symbol: sf3b2
Alias: -
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 15569 bases
Position: chr18:19492245-19507813
Accession: 101159948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010339	DUF382	PF04037.13	2.3e-58	1	1
ENSORLP00000010339	SAP	PF02037.27	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000010340	-	5393	XM_004079869	ENSORLP00000010339	867 (aa)	XP_004079917	H2LW52

Gene Model

Click here to download ENSORLG00000008235's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008235	sf3b2	85	74.607	ENSG00000087365	SF3B2	99	91.483	Homo_sapiens
ENSORLG00000008235	sf3b2	94	82.072	ENSAPOG00000001974	sf3b2	96	82.568	Acanthochromis_polyacanthus
ENSORLG00000008235	sf3b2	85	74.672	ENSAMEG00000017206	SF3B2	97	66.854	Ailuropoda_melanoleuca
ENSORLG00000008235	sf3b2	86	85.938	ENSACIG00000000624	sf3b2	100	83.410	Amphilophus_citrinellus
ENSORLG00000008235	sf3b2	97	82.045	ENSAOCG00000009207	sf3b2	100	82.514	Amphiprion_ocellaris
ENSORLG00000008235	sf3b2	97	81.973	ENSAPEG00000002762	sf3b2	100	82.360	Amphiprion_percula
ENSORLG00000008235	sf3b2	94	56.705	ENSACAG00000008615	SF3B2	98	55.946	Anolis_carolinensis
ENSORLG00000008235	sf3b2	85	74.476	ENSANAG00000029120	SF3B2	97	67.455	Aotus_nancymaae
ENSORLG00000008235	sf3b2	97	87.192	ENSACLG00000014771	sf3b2	100	87.441	Astatotilapia_calliptera
ENSORLG00000008235	sf3b2	84	77.368	ENSAMXG00000007929	sf3b2	100	74.053	Astyanax_mexicanus
ENSORLG00000008235	sf3b2	85	74.770	ENSBTAG00000002778	SF3B2	97	68.109	Bos_taurus
ENSORLG00000008235	sf3b2	63	49.209	WBGene00021004	sftb-2	92	48.854	Caenorhabditis_elegans
ENSORLG00000008235	sf3b2	85	74.607	ENSCJAG00000001656	SF3B2	97	67.568	Callithrix_jacchus
ENSORLG00000008235	sf3b2	85	74.770	ENSCAFG00000013033	SF3B2	97	67.005	Canis_familiaris
ENSORLG00000008235	sf3b2	85	74.770	ENSCAFG00020015382	SF3B2	97	67.005	Canis_lupus_dingo
ENSORLG00000008235	sf3b2	85	73.228	ENSCHIG00000011211	SF3B2	97	66.779	Capra_hircus
ENSORLG00000008235	sf3b2	85	74.476	ENSTSYG00000000959	SF3B2	97	68.301	Carlito_syrichta
ENSORLG00000008235	sf3b2	75	71.365	ENSCPOG00000008294	SF3B2	97	63.910	Cavia_porcellus
ENSORLG00000008235	sf3b2	85	74.607	ENSCCAG00000035256	SF3B2	97	67.568	Cebus_capucinus
ENSORLG00000008235	sf3b2	85	74.607	ENSCATG00000042240	SF3B2	97	68.736	Cercocebus_atys
ENSORLG00000008235	sf3b2	85	73.553	ENSCLAG00000016852	SF3B2	97	66.403	Chinchilla_lanigera
ENSORLG00000008235	sf3b2	85	74.607	ENSCSAG00000008121	SF3B2	97	67.455	Chlorocebus_sabaeus
ENSORLG00000008235	sf3b2	76	89.796	ENSCHOG00000001476	SF3B2	90	82.143	Choloepus_hoffmanni
ENSORLG00000008235	sf3b2	73	80.438	ENSCPBG00000022465	SF3B2	98	71.597	Chrysemys_picta_bellii
ENSORLG00000008235	sf3b2	61	67.932	ENSCING00000005665	-	100	59.014	Ciona_intestinalis
ENSORLG00000008235	sf3b2	72	60.703	ENSCSAVG00000002029	-	99	59.744	Ciona_savignyi
ENSORLG00000008235	sf3b2	85	74.607	ENSCANG00000039680	SF3B2	97	67.455	Colobus_angolensis_palliatus
ENSORLG00000008235	sf3b2	85	73.553	ENSCGRG00001015741	Sf3b2	97	66.403	Cricetulus_griseus_chok1gshd
ENSORLG00000008235	sf3b2	85	73.553	ENSCGRG00000018110	Sf3b2	97	68.166	Cricetulus_griseus_crigri
ENSORLG00000008235	sf3b2	85	78.121	ENSCSEG00000000230	sf3b2	100	75.350	Cynoglossus_semilaevis
ENSORLG00000008235	sf3b2	85	86.248	ENSCVAG00000003357	sf3b2	100	80.600	Cyprinodon_variegatus
ENSORLG00000008235	sf3b2	97	69.669	ENSDARG00000018049	sf3b2	100	71.850	Danio_rerio
ENSORLG00000008235	sf3b2	85	74.244	ENSDNOG00000009484	SF3B2	97	71.302	Dasypus_novemcinctus
ENSORLG00000008235	sf3b2	85	73.850	ENSDORG00000002495	Sf3b2	97	66.930	Dipodomys_ordii
ENSORLG00000008235	sf3b2	50	82.258	ENSETEG00000020284	SF3B2	84	82.051	Echinops_telfairi
ENSORLG00000008235	sf3b2	91	61.862	ENSEBUG00000013703	sf3b2	86	63.520	Eptatretus_burgeri
ENSORLG00000008235	sf3b2	85	74.803	ENSEASG00005004508	SF3B2	97	67.042	Equus_asinus_asinus
ENSORLG00000008235	sf3b2	85	74.803	ENSECAG00000024461	SF3B2	97	67.042	Equus_caballus
ENSORLG00000008235	sf3b2	53	87.500	ENSEEUG00000014278	-	53	87.500	Erinaceus_europaeus
ENSORLG00000008235	sf3b2	97	73.370	ENSELUG00000005586	sf3b2	100	74.783	Esox_lucius
ENSORLG00000008235	sf3b2	85	74.770	ENSFCAG00000013289	SF3B2	97	67.005	Felis_catus
ENSORLG00000008235	sf3b2	74	69.077	ENSFALG00000014653	SF3B2	91	67.939	Ficedula_albicollis
ENSORLG00000008235	sf3b2	85	71.984	ENSFDAG00000019806	SF3B2	97	67.303	Fukomys_damarensis
ENSORLG00000008235	sf3b2	97	78.719	ENSFHEG00000020968	sf3b2	100	79.863	Fundulus_heteroclitus
ENSORLG00000008235	sf3b2	75	84.604	ENSGMOG00000012131	sf3b2	100	85.909	Gadus_morhua
ENSORLG00000008235	sf3b2	97	81.422	ENSGAFG00000001675	sf3b2	100	80.963	Gambusia_affinis
ENSORLG00000008235	sf3b2	75	86.930	ENSGACG00000019012	sf3b2	100	87.082	Gasterosteus_aculeatus
ENSORLG00000008235	sf3b2	95	67.667	ENSGAGG00000023916	SF3B2	98	68.512	Gopherus_agassizii
ENSORLG00000008235	sf3b2	76	90.986	ENSGGOG00000028448	SF3B2	97	90.986	Gorilla_gorilla
ENSORLG00000008235	sf3b2	97	87.192	ENSHBUG00000017349	sf3b2	100	87.441	Haplochromis_burtoni
ENSORLG00000008235	sf3b2	85	73.289	ENSHGLG00000010807	SF3B2	97	66.290	Heterocephalus_glaber_female
ENSORLG00000008235	sf3b2	85	74.346	ENSHGLG00100006361	SF3B2	97	67.230	Heterocephalus_glaber_male
ENSORLG00000008235	sf3b2	97	78.231	ENSHCOG00000016203	sf3b2	100	77.881	Hippocampus_comes
ENSORLG00000008235	sf3b2	97	70.819	ENSIPUG00000009383	sf3b2	100	72.452	Ictalurus_punctatus
ENSORLG00000008235	sf3b2	85	74.476	ENSSTOG00000028892	SF3B2	97	67.230	Ictidomys_tridecemlineatus
ENSORLG00000008235	sf3b2	85	72.157	ENSJJAG00000018193	Sf3b2	97	65.953	Jaculus_jaculus
ENSORLG00000008235	sf3b2	97	81.109	ENSKMAG00000020181	sf3b2	100	82.127	Kryptolebias_marmoratus
ENSORLG00000008235	sf3b2	97	81.973	ENSLBEG00000027739	sf3b2	100	84.036	Labrus_bergylta
ENSORLG00000008235	sf3b2	81	80.908	ENSLACG00000010429	SF3B2	100	66.776	Latimeria_chalumnae
ENSORLG00000008235	sf3b2	85	73.316	ENSLAFG00000002128	SF3B2	97	65.950	Loxodonta_africana
ENSORLG00000008235	sf3b2	85	74.510	ENSMFAG00000003064	SF3B2	97	68.657	Macaca_fascicularis
ENSORLG00000008235	sf3b2	85	70.263	ENSMMUG00000011743	SF3B2	97	63.688	Macaca_mulatta
ENSORLG00000008235	sf3b2	85	74.607	ENSMNEG00000034437	SF3B2	97	68.736	Macaca_nemestrina
ENSORLG00000008235	sf3b2	85	74.607	ENSMLEG00000029373	SF3B2	97	68.736	Mandrillus_leucophaeus
ENSORLG00000008235	sf3b2	97	82.167	ENSMAMG00000014103	sf3b2	100	84.904	Mastacembelus_armatus
ENSORLG00000008235	sf3b2	97	85.121	ENSMZEG00005020789	sf3b2	100	85.995	Maylandia_zebra
ENSORLG00000008235	sf3b2	94	67.742	ENSMICG00000016942	-	97	67.016	Microcebus_murinus
ENSORLG00000008235	sf3b2	85	74.738	ENSMICG00000008565	-	97	67.568	Microcebus_murinus
ENSORLG00000008235	sf3b2	85	73.553	ENSMOCG00000003136	Sf3b2	97	66.403	Microtus_ochrogaster
ENSORLG00000008235	sf3b2	97	79.700	ENSMMOG00000012928	sf3b2	100	78.893	Mola_mola
ENSORLG00000008235	sf3b2	85	71.859	ENSMODG00000008490	-	96	71.036	Monodelphis_domestica
ENSORLG00000008235	sf3b2	72	75.949	ENSMODG00000025020	-	99	72.939	Monodelphis_domestica
ENSORLG00000008235	sf3b2	97	79.522	ENSMALG00000015137	sf3b2	100	78.995	Monopterus_albus
ENSORLG00000008235	sf3b2	85	71.879	MGP_CAROLIEiJ_G0022539	Sf3b2	97	66.478	Mus_caroli
ENSORLG00000008235	sf3b2	85	73.421	ENSMUSG00000024853	Sf3b2	97	66.176	Mus_musculus
ENSORLG00000008235	sf3b2	85	73.289	MGP_PahariEiJ_G0014036	Sf3b2	97	66.063	Mus_pahari
ENSORLG00000008235	sf3b2	85	73.289	MGP_SPRETEiJ_G0023453	Sf3b2	97	66.176	Mus_spretus
ENSORLG00000008235	sf3b2	85	74.770	ENSMPUG00000011349	SF3B2	97	67.005	Mustela_putorius_furo
ENSORLG00000008235	sf3b2	85	74.507	ENSMLUG00000011136	SF3B2	97	67.494	Myotis_lucifugus
ENSORLG00000008235	sf3b2	85	73.254	ENSNGAG00000012103	Sf3b2	97	66.138	Nannospalax_galili
ENSORLG00000008235	sf3b2	85	71.206	ENSNLEG00000006007	SF3B2	97	65.870	Nomascus_leucogenys
ENSORLG00000008235	sf3b2	76	85.593	ENSMEUG00000000019	SF3B2	83	85.593	Notamacropus_eugenii
ENSORLG00000008235	sf3b2	94	64.220	ENSODEG00000017764	SF3B2	97	63.080	Octodon_degus
ENSORLG00000008235	sf3b2	97	84.055	ENSONIG00000013068	sf3b2	100	84.554	Oreochromis_niloticus
ENSORLG00000008235	sf3b2	85	66.494	ENSOANG00000012482	SF3B2	96	67.320	Ornithorhynchus_anatinus
ENSORLG00000008235	sf3b2	94	70.838	ENSOCUG00000015722	-	97	70.012	Oryctolagus_cuniculus
ENSORLG00000008235	sf3b2	61	47.016	ENSOCUG00000024154	-	100	46.835	Oryctolagus_cuniculus
ENSORLG00000008235	sf3b2	97	100.000	ENSORLG00020005357	sf3b2	100	100.000	Oryzias_latipes_hni
ENSORLG00000008235	sf3b2	99	99.422	ENSORLG00015022454	sf3b2	91	99.422	Oryzias_latipes_hsok
ENSORLG00000008235	sf3b2	97	94.398	ENSOMEG00000017480	sf3b2	100	95.113	Oryzias_melastigma
ENSORLG00000008235	sf3b2	85	70.773	ENSOGAG00000005799	SF3B2	97	64.865	Otolemur_garnettii
ENSORLG00000008235	sf3b2	94	67.442	ENSOARG00000002125	SF3B2	100	73.936	Ovis_aries
ENSORLG00000008235	sf3b2	85	74.607	ENSPPAG00000007359	SF3B2	97	67.455	Pan_paniscus
ENSORLG00000008235	sf3b2	85	74.770	ENSPPRG00000013334	SF3B2	97	67.005	Panthera_pardus
ENSORLG00000008235	sf3b2	85	74.770	ENSPTIG00000015022	SF3B2	97	67.005	Panthera_tigris_altaica
ENSORLG00000008235	sf3b2	85	74.607	ENSPTRG00000003912	SF3B2	97	67.571	Pan_troglodytes
ENSORLG00000008235	sf3b2	85	74.607	ENSPANG00000008593	SF3B2	97	68.736	Papio_anubis
ENSORLG00000008235	sf3b2	97	74.128	ENSPKIG00000016576	sf3b2	100	76.655	Paramormyrops_kingsleyae
ENSORLG00000008235	sf3b2	85	73.448	ENSPSIG00000003158	SF3B2	99	73.265	Pelodiscus_sinensis
ENSORLG00000008235	sf3b2	81	67.442	ENSPEMG00000015451	-	95	65.173	Peromyscus_maniculatus_bairdii
ENSORLG00000008235	sf3b2	85	73.421	ENSPEMG00000015437	Sf3b2	97	66.290	Peromyscus_maniculatus_bairdii
ENSORLG00000008235	sf3b2	85	73.553	ENSPCIG00000008381	SF3B2	99	68.714	Phascolarctos_cinereus
ENSORLG00000008235	sf3b2	97	80.871	ENSPFOG00000002552	sf3b2	100	81.515	Poecilia_formosa
ENSORLG00000008235	sf3b2	97	80.641	ENSPLAG00000001471	sf3b2	100	81.860	Poecilia_latipinna
ENSORLG00000008235	sf3b2	97	80.505	ENSPMEG00000013180	sf3b2	100	81.494	Poecilia_mexicana
ENSORLG00000008235	sf3b2	85	85.033	ENSPREG00000002665	sf3b2	100	82.913	Poecilia_reticulata
ENSORLG00000008235	sf3b2	57	68.251	ENSPPYG00000003034	-	94	59.692	Pongo_abelii
ENSORLG00000008235	sf3b2	85	74.901	ENSPCAG00000005129	SF3B2	97	67.342	Procavia_capensis
ENSORLG00000008235	sf3b2	85	74.607	ENSPCOG00000025375	SF3B2	97	67.455	Propithecus_coquereli
ENSORLG00000008235	sf3b2	54	93.421	ENSPVAG00000005466	-	85	93.421	Pteropus_vampyrus
ENSORLG00000008235	sf3b2	87	85.977	ENSPNYG00000023594	sf3b2	100	86.752	Pundamilia_nyererei
ENSORLG00000008235	sf3b2	97	72.564	ENSPNAG00000001891	sf3b2	100	73.631	Pygocentrus_nattereri
ENSORLG00000008235	sf3b2	85	71.879	ENSRNOG00000020412	Sf3b2	97	66.176	Rattus_norvegicus
ENSORLG00000008235	sf3b2	85	74.607	ENSRBIG00000034065	SF3B2	97	68.415	Rhinopithecus_bieti
ENSORLG00000008235	sf3b2	85	74.607	ENSRROG00000034496	SF3B2	97	68.415	Rhinopithecus_roxellana
ENSORLG00000008235	sf3b2	94	68.166	ENSSBOG00000026337	SF3B2	97	67.426	Saimiri_boliviensis_boliviensis
ENSORLG00000008235	sf3b2	93	56.757	ENSSHAG00000018043	-	88	62.401	Sarcophilus_harrisii
ENSORLG00000008235	sf3b2	85	70.883	ENSSHAG00000010933	-	97	66.023	Sarcophilus_harrisii
ENSORLG00000008235	sf3b2	97	74.140	ENSSFOG00015021125	sf3b2	100	74.719	Scleropages_formosus
ENSORLG00000008235	sf3b2	97	81.860	ENSSMAG00000004079	sf3b2	100	81.977	Scophthalmus_maximus
ENSORLG00000008235	sf3b2	97	79.395	ENSSLDG00000006838	sf3b2	100	83.896	Seriola_lalandi_dorsalis
ENSORLG00000008235	sf3b2	72	80.787	ENSSPUG00000009198	SF3B2	98	67.389	Sphenodon_punctatus
ENSORLG00000008235	sf3b2	97	80.868	ENSSPAG00000004406	sf3b2	100	81.767	Stegastes_partitus
ENSORLG00000008235	sf3b2	85	75.033	ENSSSCG00000012957	SF3B2	97	68.415	Sus_scrofa
ENSORLG00000008235	sf3b2	97	68.421	ENSTRUG00000007611	sf3b2	99	72.676	Takifugu_rubripes
ENSORLG00000008235	sf3b2	86	77.984	ENSTNIG00000007441	sf3b2	100	76.230	Tetraodon_nigroviridis
ENSORLG00000008235	sf3b2	80	66.252	ENSTBEG00000004258	SF3B2	73	88.732	Tupaia_belangeri
ENSORLG00000008235	sf3b2	85	75.033	ENSTTRG00000014339	SF3B2	97	68.301	Tursiops_truncatus
ENSORLG00000008235	sf3b2	82	74.255	ENSUAMG00000020754	SF3B2	96	64.163	Ursus_americanus
ENSORLG00000008235	sf3b2	85	74.770	ENSUMAG00000010994	SF3B2	97	67.005	Ursus_maritimus
ENSORLG00000008235	sf3b2	58	86.667	ENSVPAG00000008695	SF3B2	67	86.667	Vicugna_pacos
ENSORLG00000008235	sf3b2	85	74.770	ENSVVUG00000027029	SF3B2	97	67.005	Vulpes_vulpes
ENSORLG00000008235	sf3b2	80	71.326	ENSXETG00000008422	sf3b2	88	71.348	Xenopus_tropicalis
ENSORLG00000008235	sf3b2	86	78.629	ENSXCOG00000008943	sf3b2	95	77.866	Xiphophorus_couchianus
ENSORLG00000008235	sf3b2	97	80.182	ENSXMAG00000008467	sf3b2	100	81.393	Xiphophorus_maculatus