EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008242 (Gene tree)
Gene ID: 101163848
Gene Symbol: -
Alias: -
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7923 bases
Position: chr17:13402634-13410556
Accession: 101163848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010346	Ribonuc_P_40	PF08584.11	5.2e-78	1	1
ENSORLP00000027698	Ribonuc_P_40	PF08584.11	5.3e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000010347	-	1041	XM_004078885	ENSORLP00000010346	346 (aa)	XP_004078933	H2LW59
ENSORLT00000037380	-	6139	-	ENSORLP00000027698	379 (aa)	-	-

Gene Model

Click here to download ENSORLG00000008242's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG
ola03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008242	-	100	38.056	ENSG00000124787	RPP40	99	38.056	Homo_sapiens
ENSORLG00000008242	-	95	53.474	ENSAPOG00000008660	rpp40	99	53.474	Acanthochromis_polyacanthus
ENSORLG00000008242	-	100	36.944	ENSAMEG00000012938	RPP40	99	36.944	Ailuropoda_melanoleuca
ENSORLG00000008242	-	99	62.254	ENSACIG00000003617	rpp40	99	61.690	Amphilophus_citrinellus
ENSORLG00000008242	-	99	71.098	ENSAOCG00000011846	rpp40	99	71.098	Amphiprion_ocellaris
ENSORLG00000008242	-	99	71.098	ENSAPEG00000001322	rpp40	99	71.098	Amphiprion_percula
ENSORLG00000008242	-	99	67.241	ENSATEG00000006584	rpp40	99	67.529	Anabas_testudineus
ENSORLG00000008242	-	83	37.542	ENSAPLG00000005691	RPP40	99	37.542	Anas_platyrhynchos
ENSORLG00000008242	-	99	40.169	ENSACAG00000006550	RPP40	87	40.169	Anolis_carolinensis
ENSORLG00000008242	-	100	36.111	ENSANAG00000029246	RPP40	99	36.111	Aotus_nancymaae
ENSORLG00000008242	-	98	70.294	ENSACLG00000015883	rpp40	96	70.294	Astatotilapia_calliptera
ENSORLG00000008242	-	99	44.507	ENSAMXG00000001755	rpp40	99	44.507	Astyanax_mexicanus
ENSORLG00000008242	-	100	38.056	ENSBTAG00000003332	RPP40	99	38.056	Bos_taurus
ENSORLG00000008242	-	100	37.222	ENSCJAG00000021373	RPP40	99	37.222	Callithrix_jacchus
ENSORLG00000008242	-	100	37.778	ENSCAFG00000009435	RPP40	99	37.778	Canis_familiaris
ENSORLG00000008242	-	100	37.778	ENSCAFG00020013380	RPP40	99	37.778	Canis_lupus_dingo
ENSORLG00000008242	-	100	37.047	ENSCHIG00000016849	RPP40	99	37.047	Capra_hircus
ENSORLG00000008242	-	100	36.389	ENSTSYG00000032857	RPP40	99	36.389	Carlito_syrichta
ENSORLG00000008242	-	89	34.161	ENSCAPG00000004957	RPP40	96	34.161	Cavia_aperea
ENSORLG00000008242	-	100	38.333	ENSCPOG00000005855	RPP40	99	38.333	Cavia_porcellus
ENSORLG00000008242	-	100	37.222	ENSCCAG00000019809	RPP40	99	37.222	Cebus_capucinus
ENSORLG00000008242	-	100	38.056	ENSCATG00000038787	RPP40	99	38.056	Cercocebus_atys
ENSORLG00000008242	-	100	37.500	ENSCLAG00000003235	RPP40	99	37.500	Chinchilla_lanigera
ENSORLG00000008242	-	100	38.333	ENSCSAG00000007307	RPP40	99	38.333	Chlorocebus_sabaeus
ENSORLG00000008242	-	54	42.500	ENSCHOG00000005856	-	76	42.500	Choloepus_hoffmanni
ENSORLG00000008242	-	100	38.611	ENSCPBG00000009003	RPP40	99	38.611	Chrysemys_picta_bellii
ENSORLG00000008242	-	100	38.056	ENSCANG00000033965	RPP40	99	38.056	Colobus_angolensis_palliatus
ENSORLG00000008242	-	100	35.278	ENSCGRG00001018328	Rpp40	99	35.278	Cricetulus_griseus_chok1gshd
ENSORLG00000008242	-	100	35.278	ENSCGRG00000011344	Rpp40	99	35.278	Cricetulus_griseus_crigri
ENSORLG00000008242	-	99	54.467	ENSCSEG00000015006	-	99	54.179	Cynoglossus_semilaevis
ENSORLG00000008242	-	74	52.510	ENSCVAG00000012169	rpp40	100	50.579	Cyprinodon_variegatus
ENSORLG00000008242	-	99	46.369	ENSDARG00000017605	rpp40	99	46.369	Danio_rerio
ENSORLG00000008242	-	82	35.374	ENSDNOG00000048136	RPP40	99	35.374	Dasypus_novemcinctus
ENSORLG00000008242	-	100	36.667	ENSDORG00000029944	-	99	36.667	Dipodomys_ordii
ENSORLG00000008242	-	100	31.250	ENSDORG00000011196	-	99	31.250	Dipodomys_ordii
ENSORLG00000008242	-	99	35.475	ENSEBUG00000000386	rpp40	99	35.475	Eptatretus_burgeri
ENSORLG00000008242	-	100	37.778	ENSEASG00005012116	RPP40	79	37.778	Equus_asinus_asinus
ENSORLG00000008242	-	100	38.056	ENSECAG00000017247	RPP40	79	37.500	Equus_caballus
ENSORLG00000008242	-	79	32.867	ENSEEUG00000012087	RPP40	97	32.867	Erinaceus_europaeus
ENSORLG00000008242	-	99	47.619	ENSELUG00000017004	rpp40	99	47.619	Esox_lucius
ENSORLG00000008242	-	100	36.944	ENSFCAG00000009249	RPP40	99	36.944	Felis_catus
ENSORLG00000008242	-	86	37.231	ENSFALG00000013166	RPP40	99	37.231	Ficedula_albicollis
ENSORLG00000008242	-	100	36.944	ENSFDAG00000013001	-	99	36.944	Fukomys_damarensis
ENSORLG00000008242	-	80	32.056	ENSFDAG00000000265	-	99	32.056	Fukomys_damarensis
ENSORLG00000008242	-	99	69.653	ENSFHEG00000021429	rpp40	88	69.653	Fundulus_heteroclitus
ENSORLG00000008242	-	89	41.325	ENSGMOG00000018653	rpp40	100	41.325	Gadus_morhua
ENSORLG00000008242	-	100	36.313	ENSGALG00000036074	RPP40	99	36.313	Gallus_gallus
ENSORLG00000008242	-	84	54.608	ENSGAFG00000004189	-	100	54.608	Gambusia_affinis
ENSORLG00000008242	-	99	65.714	ENSGACG00000002472	rpp40	99	65.714	Gasterosteus_aculeatus
ENSORLG00000008242	-	100	39.167	ENSGAGG00000012918	RPP40	99	39.167	Gopherus_agassizii
ENSORLG00000008242	-	100	38.056	ENSGGOG00000013764	RPP40	99	38.056	Gorilla_gorilla
ENSORLG00000008242	-	92	65.432	ENSHBUG00000009378	rpp40	96	65.432	Haplochromis_burtoni
ENSORLG00000008242	-	100	37.500	ENSHGLG00000004871	RPP40	99	37.500	Heterocephalus_glaber_female
ENSORLG00000008242	-	100	37.500	ENSHGLG00100002080	RPP40	99	37.500	Heterocephalus_glaber_male
ENSORLG00000008242	-	96	50.294	ENSHCOG00000013264	-	92	50.294	Hippocampus_comes
ENSORLG00000008242	-	100	45.531	ENSIPUG00000008951	RPP40	99	45.531	Ictalurus_punctatus
ENSORLG00000008242	-	100	36.111	ENSSTOG00000011199	RPP40	99	36.111	Ictidomys_tridecemlineatus
ENSORLG00000008242	-	100	37.326	ENSJJAG00000020629	Rpp40	99	37.326	Jaculus_jaculus
ENSORLG00000008242	-	99	69.364	ENSKMAG00000019358	rpp40	99	69.364	Kryptolebias_marmoratus
ENSORLG00000008242	-	99	65.812	ENSLBEG00000022724	rpp40	99	65.812	Labrus_bergylta
ENSORLG00000008242	-	99	41.828	ENSLACG00000014848	RPP40	99	41.828	Latimeria_chalumnae
ENSORLG00000008242	-	100	44.321	ENSLOCG00000011650	rpp40	99	44.321	Lepisosteus_oculatus
ENSORLG00000008242	-	82	38.926	ENSLAFG00000007530	RPP40	98	38.926	Loxodonta_africana
ENSORLG00000008242	-	100	38.056	ENSMFAG00000043100	RPP40	99	38.056	Macaca_fascicularis
ENSORLG00000008242	-	100	38.056	ENSMMUG00000004966	RPP40	99	38.056	Macaca_mulatta
ENSORLG00000008242	-	100	38.056	ENSMNEG00000041986	RPP40	99	38.056	Macaca_nemestrina
ENSORLG00000008242	-	99	34.174	ENSMLEG00000040851	RPP40	100	34.174	Mandrillus_leucophaeus
ENSORLG00000008242	-	99	69.075	ENSMAMG00000019551	rpp40	99	69.075	Mastacembelus_armatus
ENSORLG00000008242	-	99	70.520	ENSMZEG00005019475	rpp40	99	70.520	Maylandia_zebra
ENSORLG00000008242	-	98	36.901	ENSMGAG00000004009	RPP40	98	36.901	Meleagris_gallopavo
ENSORLG00000008242	-	100	35.833	ENSMAUG00000010268	Rpp40	99	35.833	Mesocricetus_auratus
ENSORLG00000008242	-	100	38.611	ENSMICG00000003297	RPP40	99	35.475	Microcebus_murinus
ENSORLG00000008242	-	100	36.944	ENSMOCG00000000305	Rpp40	99	36.944	Microtus_ochrogaster
ENSORLG00000008242	-	99	57.267	ENSMMOG00000020591	-	99	56.686	Mola_mola
ENSORLG00000008242	-	100	36.842	ENSMODG00000009826	RPP40	99	36.842	Monodelphis_domestica
ENSORLG00000008242	-	99	69.075	ENSMALG00000020133	rpp40	99	69.075	Monopterus_albus
ENSORLG00000008242	-	100	36.111	MGP_CAROLIEiJ_G0018429	Rpp40	99	36.111	Mus_caroli
ENSORLG00000008242	-	100	36.389	ENSMUSG00000021418	Rpp40	99	36.389	Mus_musculus
ENSORLG00000008242	-	100	36.667	MGP_PahariEiJ_G0019497	Rpp40	99	36.667	Mus_pahari
ENSORLG00000008242	-	100	35.833	MGP_SPRETEiJ_G0019309	Rpp40	99	35.833	Mus_spretus
ENSORLG00000008242	-	100	37.500	ENSMPUG00000000530	RPP40	93	37.500	Mustela_putorius_furo
ENSORLG00000008242	-	100	38.889	ENSMLUG00000000501	RPP40	99	38.889	Myotis_lucifugus
ENSORLG00000008242	-	100	36.667	ENSNGAG00000023955	-	99	36.667	Nannospalax_galili
ENSORLG00000008242	-	94	34.911	ENSNGAG00000022529	-	98	34.911	Nannospalax_galili
ENSORLG00000008242	-	88	64.309	ENSNBRG00000017465	rpp40	87	63.722	Neolamprologus_brichardi
ENSORLG00000008242	-	100	38.056	ENSNLEG00000034397	RPP40	99	38.056	Nomascus_leucogenys
ENSORLG00000008242	-	100	33.333	ENSMEUG00000005300	RPP40	99	33.333	Notamacropus_eugenii
ENSORLG00000008242	-	100	36.592	ENSODEG00000018153	-	99	36.592	Octodon_degus
ENSORLG00000008242	-	100	37.778	ENSODEG00000007255	-	99	37.778	Octodon_degus
ENSORLG00000008242	-	89	33.230	ENSODEG00000006170	-	100	33.230	Octodon_degus
ENSORLG00000008242	-	99	70.231	ENSONIG00000014016	rpp40	99	70.231	Oreochromis_niloticus
ENSORLG00000008242	-	82	39.130	ENSOANG00000001200	RPP40	98	39.130	Ornithorhynchus_anatinus
ENSORLG00000008242	-	99	37.430	ENSOCUG00000000354	RPP40	99	37.430	Oryctolagus_cuniculus
ENSORLG00000008242	-	100	98.266	ENSORLG00020013745	-	92	98.153	Oryzias_latipes_hni
ENSORLG00000008242	-	100	98.844	ENSORLG00015000887	-	100	98.844	Oryzias_latipes_hsok
ENSORLG00000008242	-	100	92.197	ENSOMEG00000002747	rpp40	100	92.197	Oryzias_melastigma
ENSORLG00000008242	-	100	38.333	ENSOGAG00000006055	RPP40	99	38.333	Otolemur_garnettii
ENSORLG00000008242	-	89	36.728	ENSOARG00000018783	RPP40	99	37.667	Ovis_aries
ENSORLG00000008242	-	100	38.056	ENSPPAG00000023703	RPP40	99	38.056	Pan_paniscus
ENSORLG00000008242	-	100	36.944	ENSPPRG00000005612	RPP40	99	36.944	Panthera_pardus
ENSORLG00000008242	-	100	34.648	ENSPTIG00000018847	RPP40	99	34.160	Panthera_tigris_altaica
ENSORLG00000008242	-	100	37.500	ENSPTRG00000017690	RPP40	99	37.500	Pan_troglodytes
ENSORLG00000008242	-	100	38.056	ENSPANG00000017865	RPP40	99	38.056	Papio_anubis
ENSORLG00000008242	-	99	43.978	ENSPKIG00000006311	rpp40	99	43.978	Paramormyrops_kingsleyae
ENSORLG00000008242	-	60	40.271	ENSPSIG00000007854	RPP40	99	40.271	Pelodiscus_sinensis
ENSORLG00000008242	-	80	32.534	ENSPEMG00000020809	Rpp40	85	32.534	Peromyscus_maniculatus_bairdii
ENSORLG00000008242	-	75	38.043	ENSPMAG00000008412	rpp40	99	36.594	Petromyzon_marinus
ENSORLG00000008242	-	100	36.667	ENSPCIG00000010682	RPP40	99	36.667	Phascolarctos_cinereus
ENSORLG00000008242	-	99	62.356	ENSPFOG00000011460	rpp40	99	62.356	Poecilia_formosa
ENSORLG00000008242	-	99	62.717	ENSPLAG00000001334	rpp40	99	62.717	Poecilia_latipinna
ENSORLG00000008242	-	99	63.006	ENSPMEG00000007721	rpp40	99	63.006	Poecilia_mexicana
ENSORLG00000008242	-	99	63.584	ENSPREG00000009215	rpp40	99	63.584	Poecilia_reticulata
ENSORLG00000008242	-	100	37.778	ENSPPYG00000016194	RPP40	99	37.778	Pongo_abelii
ENSORLG00000008242	-	53	39.891	ENSPCAG00000002700	-	98	39.891	Procavia_capensis
ENSORLG00000008242	-	100	36.944	ENSPCOG00000003907	RPP40	99	36.944	Propithecus_coquereli
ENSORLG00000008242	-	100	37.500	ENSPVAG00000011325	RPP40	99	37.500	Pteropus_vampyrus
ENSORLG00000008242	-	84	66.667	ENSPNYG00000004432	rpp40	100	65.636	Pundamilia_nyererei
ENSORLG00000008242	-	99	43.855	ENSPNAG00000019125	rpp40	99	43.855	Pygocentrus_nattereri
ENSORLG00000008242	-	100	36.667	ENSRNOG00000016226	Rpp40	99	36.667	Rattus_norvegicus
ENSORLG00000008242	-	100	37.778	ENSRBIG00000035800	RPP40	99	37.778	Rhinopithecus_bieti
ENSORLG00000008242	-	100	37.778	ENSRROG00000039116	RPP40	99	37.778	Rhinopithecus_roxellana
ENSORLG00000008242	-	100	37.222	ENSSBOG00000020297	RPP40	99	37.222	Saimiri_boliviensis_boliviensis
ENSORLG00000008242	-	75	38.182	ENSSHAG00000002102	RPP40	99	38.182	Sarcophilus_harrisii
ENSORLG00000008242	-	99	47.059	ENSSFOG00015001142	rpp40	80	47.059	Scleropages_formosus
ENSORLG00000008242	-	99	69.231	ENSSDUG00000007202	rpp40	99	69.231	Seriola_dumerili
ENSORLG00000008242	-	99	68.661	ENSSLDG00000017563	rpp40	99	68.661	Seriola_lalandi_dorsalis
ENSORLG00000008242	-	81	36.610	ENSSPUG00000018950	-	100	36.610	Sphenodon_punctatus
ENSORLG00000008242	-	100	37.778	ENSSPUG00000017487	-	99	37.778	Sphenodon_punctatus
ENSORLG00000008242	-	99	69.653	ENSSPAG00000022716	rpp40	99	69.653	Stegastes_partitus
ENSORLG00000008242	-	99	38.375	ENSSSCG00000000998	RPP40	99	38.079	Sus_scrofa
ENSORLG00000008242	-	99	38.936	ENSTGUG00000002258	-	99	38.936	Taeniopygia_guttata
ENSORLG00000008242	-	100	66.289	ENSTRUG00000003755	rpp40	100	66.289	Takifugu_rubripes
ENSORLG00000008242	-	100	61.190	ENSTNIG00000003077	rpp40	99	61.190	Tetraodon_nigroviridis
ENSORLG00000008242	-	99	33.333	ENSTTRG00000007319	RPP40	99	33.333	Tursiops_truncatus
ENSORLG00000008242	-	100	36.667	ENSUAMG00000002159	RPP40	99	36.667	Ursus_americanus
ENSORLG00000008242	-	100	36.667	ENSUMAG00000018639	RPP40	93	36.667	Ursus_maritimus
ENSORLG00000008242	-	100	37.500	ENSVVUG00000005451	RPP40	99	37.500	Vulpes_vulpes
ENSORLG00000008242	-	100	37.396	ENSXETG00000017617	rpp40	99	37.396	Xenopus_tropicalis
ENSORLG00000008242	-	99	47.753	ENSXMAG00000024940	rpp40	98	48.315	Xiphophorus_maculatus