EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000008288 (Gene tree)
Gene ID
101164503
Gene Symbol
atxn1b
Alias
-
Full Name
ataxin-1
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Plus strand
Length
11829 bases
Position
chr16:16833536-16845364
Accession
101164503
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000010398AXHPF08517.125e-4111
ENSORLP00000028720AXHPF08517.125e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000041140-3118-ENSORLP00000028720827 (aa)-UPI0002A4A916
ENSORLT00000010399-3060XM_004078102ENSORLP00000010398827 (aa)XP_004078150H2LWB1
Gene Model
Click here to download ENSORLG00000008288's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008288's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000008288atxn1b9937.084ENSORLG00000013003atxn1a9937.414
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000008288atxn1b9938.033ENSG00000124788ATXN19938.095Homo_sapiens
ENSORLG00000008288atxn1b10080.889ENSAPOG00000005003atxn1b10081.010Acanthochromis_polyacanthus
ENSORLG00000008288atxn1b9940.636ENSAPOG00000018662atxn1a9940.223Acanthochromis_polyacanthus
ENSORLG00000008288atxn1b9938.634ENSAMEG00000004299ATXN19938.771Ailuropoda_melanoleuca
ENSORLG00000008288atxn1b10070.496ENSACIG00000014661atxn1b10070.496Amphilophus_citrinellus
ENSORLG00000008288atxn1b8482.759ENSACIG00000016088atxn1a9682.759Amphilophus_citrinellus
ENSORLG00000008288atxn1b10080.602ENSAOCG00000019715atxn1b10080.723Amphiprion_ocellaris
ENSORLG00000008288atxn1b9941.049ENSAOCG00000015796atxn1a9940.474Amphiprion_ocellaris
ENSORLG00000008288atxn1b9941.223ENSAPEG00000011313atxn1a9940.135Amphiprion_percula
ENSORLG00000008288atxn1b10080.602ENSAPEG00000022436atxn1b10080.723Amphiprion_percula
ENSORLG00000008288atxn1b10079.352ENSATEG00000002982atxn1b10079.352Anabas_testudineus
ENSORLG00000008288atxn1b9941.224ENSATEG00000013601atxn1a9940.276Anabas_testudineus
ENSORLG00000008288atxn1b9938.339ENSACAG00000003919ATXN19938.122Anolis_carolinensis
ENSORLG00000008288atxn1b7637.053ENSANAG00000025424-9637.356Aotus_nancymaae
ENSORLG00000008288atxn1b9839.194ENSANAG00000025206-9539.238Aotus_nancymaae
ENSORLG00000008288atxn1b9939.543ENSACLG00000015429atxn1a9939.771Astatotilapia_calliptera
ENSORLG00000008288atxn1b10079.616ENSACLG00000005697atxn1b10079.616Astatotilapia_calliptera
ENSORLG00000008288atxn1b9840.393ENSAMXG00000017432atxn1b9840.437Astyanax_mexicanus
ENSORLG00000008288atxn1b9940.618ENSAMXG00000042368atxn1a9942.561Astyanax_mexicanus
ENSORLG00000008288atxn1b9938.137ENSBTAG00000019675ATXN19938.889Bos_taurus
ENSORLG00000008288atxn1b9838.970ENSCJAG00000006563ATXN19339.238Callithrix_jacchus
ENSORLG00000008288atxn1b9939.198ENSCAFG00000009934ATXN19939.444Canis_familiaris
ENSORLG00000008288atxn1b9839.087ENSCAFG00020012647ATXN19539.333Canis_lupus_dingo
ENSORLG00000008288atxn1b9938.393ENSCHIG00000018697ATXN19938.616Capra_hircus
ENSORLG00000008288atxn1b6152.128ENSTSYG00000000858ATXN19947.541Carlito_syrichta
ENSORLG00000008288atxn1b9938.367ENSCAPG00000013095ATXN19938.504Cavia_aperea
ENSORLG00000008288atxn1b9938.713ENSCPOG00000022869ATXN19938.851Cavia_porcellus
ENSORLG00000008288atxn1b9939.194ENSCCAG00000018590ATXN19939.485Cebus_capucinus
ENSORLG00000008288atxn1b9938.803ENSCATG00000042777ATXN19938.834Cercocebus_atys
ENSORLG00000008288atxn1b9939.391ENSCLAG00000002212ATXN19939.752Chinchilla_lanigera
ENSORLG00000008288atxn1b9938.889ENSCSAG00000007589ATXN19938.699Chlorocebus_sabaeus
ENSORLG00000008288atxn1b9938.920ENSCPBG00000022373ATXN19939.576Chrysemys_picta_bellii
ENSORLG00000008288atxn1b9938.951ENSCANG00000033673ATXN19938.981Colobus_angolensis_palliatus
ENSORLG00000008288atxn1b9938.721ENSCGRG00001022108Atxn19938.994Cricetulus_griseus_chok1gshd
ENSORLG00000008288atxn1b9939.071ENSCGRG00000014084Atxn19939.346Cricetulus_griseus_crigri
ENSORLG00000008288atxn1b10073.100ENSCSEG00000004666atxn1b10073.100Cynoglossus_semilaevis
ENSORLG00000008288atxn1b9938.801ENSCSEG00000017647atxn1a9939.135Cynoglossus_semilaevis
ENSORLG00000008288atxn1b9938.825ENSCVAG00000023240atxn1a9938.479Cyprinodon_variegatus
ENSORLG00000008288atxn1b10077.764ENSCVAG00000010945atxn1b10077.764Cyprinodon_variegatus
ENSORLG00000008288atxn1b9939.886ENSDARG00000061687atxn1a9941.800Danio_rerio
ENSORLG00000008288atxn1b9941.105ENSDARG00000060862atxn1b9941.547Danio_rerio
ENSORLG00000008288atxn1b5845.253ENSDNOG00000048471ATXN19245.253Dasypus_novemcinctus
ENSORLG00000008288atxn1b9937.389ENSDORG00000005940Atxn19936.923Dipodomys_ordii
ENSORLG00000008288atxn1b8242.029ENSETEG00000003815ATXN18743.721Echinops_telfairi
ENSORLG00000008288atxn1b9939.427ENSEASG00005011799ATXN19939.451Equus_asinus_asinus
ENSORLG00000008288atxn1b9939.317ENSECAG00000009251ATXN19939.514Equus_caballus
ENSORLG00000008288atxn1b9939.000ENSEEUG00000007120ATXN19938.753Erinaceus_europaeus
ENSORLG00000008288atxn1b9262.712ENSELUG00000001311atxn1b7862.712Esox_lucius
ENSORLG00000008288atxn1b9836.761ENSELUG00000003691atxn1a9637.336Esox_lucius
ENSORLG00000008288atxn1b9938.235ENSFCAG00000011298ATXN19938.375Felis_catus
ENSORLG00000008288atxn1b9938.889ENSFALG00000013400ATXN19939.843Ficedula_albicollis
ENSORLG00000008288atxn1b8944.708ENSFDAG00000020905ATXN19937.146Fukomys_damarensis
ENSORLG00000008288atxn1b10077.043ENSFHEG00000017226atxn1b10076.923Fundulus_heteroclitus
ENSORLG00000008288atxn1b9938.593ENSFHEG00000019419atxn1a9938.514Fundulus_heteroclitus
ENSORLG00000008288atxn1b9957.605ENSGMOG00000013508atxn1b10057.485Gadus_morhua
ENSORLG00000008288atxn1b9940.000ENSGALG00000012709ATXN19940.519Gallus_gallus
ENSORLG00000008288atxn1b9938.769ENSGAFG00000010544atxn1a9939.022Gambusia_affinis
ENSORLG00000008288atxn1b10076.351ENSGAFG00000007295atxn1b10076.831Gambusia_affinis
ENSORLG00000008288atxn1b9938.759ENSGACG00000003472atxn1a9938.889Gasterosteus_aculeatus
ENSORLG00000008288atxn1b9969.024ENSGACG00000008747atxn1b10068.902Gasterosteus_aculeatus
ENSORLG00000008288atxn1b9938.384ENSGAGG00000006868ATXN19938.721Gopherus_agassizii
ENSORLG00000008288atxn1b9938.258ENSGGOG00000004169ATXN19938.319Gorilla_gorilla
ENSORLG00000008288atxn1b9939.704ENSHBUG00000002508atxn1a9939.818Haplochromis_burtoni
ENSORLG00000008288atxn1b10079.736ENSHBUG00000016081atxn1b10079.736Haplochromis_burtoni
ENSORLG00000008288atxn1b9939.391ENSHGLG00000009360ATXN19939.527Heterocephalus_glaber_female
ENSORLG00000008288atxn1b9939.391ENSHGLG00100003038ATXN19939.527Heterocephalus_glaber_male
ENSORLG00000008288atxn1b9973.583ENSHCOG00000014835atxn1b9973.703Hippocampus_comes
ENSORLG00000008288atxn1b8740.984ENSHCOG00000019032atxn1a9940.850Hippocampus_comes
ENSORLG00000008288atxn1b9940.000ENSIPUG00000001402atxn19939.885Ictalurus_punctatus
ENSORLG00000008288atxn1b9942.778ENSIPUG00000002088atxn1b10042.572Ictalurus_punctatus
ENSORLG00000008288atxn1b9939.414ENSSTOG00000025423ATXN19939.775Ictidomys_tridecemlineatus
ENSORLG00000008288atxn1b9938.939ENSJJAG00000000377Atxn19938.616Jaculus_jaculus
ENSORLG00000008288atxn1b9979.540ENSKMAG00000013507atxn1b9979.419Kryptolebias_marmoratus
ENSORLG00000008288atxn1b9938.662ENSKMAG00000007216atxn1a9938.989Kryptolebias_marmoratus
ENSORLG00000008288atxn1b9940.275ENSLBEG00000024388atxn1a9940.023Labrus_bergylta
ENSORLG00000008288atxn1b10075.895ENSLBEG00000024264atxn1b10075.656Labrus_bergylta
ENSORLG00000008288atxn1b9939.302ENSLACG00000005371ATXN19939.286Latimeria_chalumnae
ENSORLG00000008288atxn1b9944.764ENSLOCG00000002910atxn1a9944.483Lepisosteus_oculatus
ENSORLG00000008288atxn1b9938.814ENSLAFG00000015231ATXN19937.838Loxodonta_africana
ENSORLG00000008288atxn1b9938.742ENSMFAG00000032779ATXN19938.749Macaca_fascicularis
ENSORLG00000008288atxn1b9938.717ENSMMUG00000002940ATXN19938.749Macaca_mulatta
ENSORLG00000008288atxn1b9938.827ENSMNEG00000036667ATXN19938.834Macaca_nemestrina
ENSORLG00000008288atxn1b7541.566ENSMLEG00000040480ATXN19739.620Mandrillus_leucophaeus
ENSORLG00000008288atxn1b10079.616ENSMAMG00000011503atxn1b10079.616Mastacembelus_armatus
ENSORLG00000008288atxn1b9940.632ENSMAMG00000014004atxn1a9940.541Mastacembelus_armatus
ENSORLG00000008288atxn1b9939.543ENSMZEG00005003602atxn1a9939.771Maylandia_zebra
ENSORLG00000008288atxn1b10079.616ENSMZEG00005015064atxn1b10079.616Maylandia_zebra
ENSORLG00000008288atxn1b9939.091ENSMGAG00000003028ATXN19939.047Meleagris_gallopavo
ENSORLG00000008288atxn1b9939.033ENSMAUG00000011491Atxn19938.870Mesocricetus_auratus
ENSORLG00000008288atxn1b9938.851ENSMICG00000011875ATXN19939.213Microcebus_murinus
ENSORLG00000008288atxn1b9939.391ENSMOCG00000001527Atxn19939.266Microtus_ochrogaster
ENSORLG00000008288atxn1b9976.000ENSMMOG00000002884atxn1b10076.000Mola_mola
ENSORLG00000008288atxn1b9939.661ENSMMOG00000018593atxn1a9940.406Mola_mola
ENSORLG00000008288atxn1b9938.724ENSMODG00000010827ATXN19938.148Monodelphis_domestica
ENSORLG00000008288atxn1b9940.498ENSMALG00000005209atxn1a9939.864Monopterus_albus
ENSORLG00000008288atxn1b9979.927ENSMALG00000012137atxn1b9980.000Monopterus_albus
ENSORLG00000008288atxn1b9939.233MGP_CAROLIEiJ_G0018479Atxn19938.920Mus_caroli
ENSORLG00000008288atxn1b9939.278ENSMUSG00000046876Atxn19938.964Mus_musculus
ENSORLG00000008288atxn1b9939.391MGP_PahariEiJ_G0019546Atxn19939.077Mus_pahari
ENSORLG00000008288atxn1b9939.278MGP_SPRETEiJ_G0019357Atxn19938.964Mus_spretus
ENSORLG00000008288atxn1b9939.218ENSMPUG00000005398ATXN19939.130Mustela_putorius_furo
ENSORLG00000008288atxn1b9939.246ENSMLUG00000000896ATXN19939.222Myotis_lucifugus
ENSORLG00000008288atxn1b9938.685ENSNGAG00000020481Atxn19939.043Nannospalax_galili
ENSORLG00000008288atxn1b10071.705ENSNBRG00000014776atxn1b10072.914Neolamprologus_brichardi
ENSORLG00000008288atxn1b9939.909ENSNBRG00000013216atxn1a9939.863Neolamprologus_brichardi
ENSORLG00000008288atxn1b9938.914ENSNLEG00000001064ATXN19938.944Nomascus_leucogenys
ENSORLG00000008288atxn1b9936.865ENSMEUG00000014680ATXN19736.585Notamacropus_eugenii
ENSORLG00000008288atxn1b9938.901ENSODEG00000006297ATXN19939.286Octodon_degus
ENSORLG00000008288atxn1b10079.856ENSONIG00000003094atxn1b10079.856Oreochromis_niloticus
ENSORLG00000008288atxn1b8933.654ENSOANG00000011866ATXN19734.856Ornithorhynchus_anatinus
ENSORLG00000008288atxn1b9939.572ENSOCUG00000015360ATXN19939.933Oryctolagus_cuniculus
ENSORLG00000008288atxn1b10098.552ENSORLG00020013514atxn1b10098.552Oryzias_latipes_hni
ENSORLG00000008288atxn1b9937.414ENSORLG00020006722atxn1a9936.842Oryzias_latipes_hni
ENSORLG00000008288atxn1b10098.670ENSORLG00015019876atxn1b10098.670Oryzias_latipes_hsok
ENSORLG00000008288atxn1b9937.841ENSORLG00015014668atxn1a9936.240Oryzias_latipes_hsok
ENSORLG00000008288atxn1b10093.229ENSOMEG00000003259atxn1b10093.229Oryzias_melastigma
ENSORLG00000008288atxn1b9937.358ENSOMEG00000012883atxn1a9839.384Oryzias_melastigma
ENSORLG00000008288atxn1b9938.926ENSOGAG00000028623ATXN110039.126Otolemur_garnettii
ENSORLG00000008288atxn1b7041.017ENSOARG00000012141ATXN17940.089Ovis_aries
ENSORLG00000008288atxn1b9938.158ENSPPAG00000028993ATXN19938.219Pan_paniscus
ENSORLG00000008288atxn1b9939.051ENSPPRG00000004547ATXN19739.788Panthera_pardus
ENSORLG00000008288atxn1b9938.310ENSPTRG00000039250ATXN19938.344Pan_troglodytes
ENSORLG00000008288atxn1b9938.717ENSPANG00000024249ATXN110038.554Papio_anubis
ENSORLG00000008288atxn1b9944.639ENSPKIG00000018323atxn1b9945.169Paramormyrops_kingsleyae
ENSORLG00000008288atxn1b7335.672ENSPSIG00000007158ATXN19236.484Pelodiscus_sinensis
ENSORLG00000008288atxn1b7240.549ENSPMGG00000022926atxn1a7340.549Periophthalmus_magnuspinnatus
ENSORLG00000008288atxn1b9962.393ENSPMGG00000013610atxn1b9964.713Periophthalmus_magnuspinnatus
ENSORLG00000008288atxn1b9938.547ENSPEMG00000014930Atxn19938.796Peromyscus_maniculatus_bairdii
ENSORLG00000008288atxn1b9938.649ENSPCIG00000019413ATXN19938.206Phascolarctos_cinereus
ENSORLG00000008288atxn1b9938.851ENSPFOG00000014422atxn1a9939.225Poecilia_formosa
ENSORLG00000008288atxn1b8571.429ENSPLAG00000018978atxn1a9572.549Poecilia_latipinna
ENSORLG00000008288atxn1b10077.791ENSPLAG00000018703atxn1b10077.791Poecilia_latipinna
ENSORLG00000008288atxn1b10077.551ENSPMEG00000023723atxn1b10077.551Poecilia_mexicana
ENSORLG00000008288atxn1b9939.086ENSPMEG00000002647atxn1a9939.016Poecilia_mexicana
ENSORLG00000008288atxn1b9938.870ENSPREG00000008333atxn1a9939.459Poecilia_reticulata
ENSORLG00000008288atxn1b10078.031ENSPREG00000020308atxn1b10078.031Poecilia_reticulata
ENSORLG00000008288atxn1b9938.090ENSPPYG00000016254ATXN19938.152Pongo_abelii
ENSORLG00000008288atxn1b6958.491ENSPCAG00000008196ATXN16049.442Procavia_capensis
ENSORLG00000008288atxn1b9938.964ENSPCOG00000013612ATXN19939.101Propithecus_coquereli
ENSORLG00000008288atxn1b8939.583ENSPVAG00000016937ATXN18639.968Pteropus_vampyrus
ENSORLG00000008288atxn1b9939.429ENSPNYG00000011920atxn1a9939.543Pundamilia_nyererei
ENSORLG00000008288atxn1b10072.189ENSPNYG00000017095atxn1b10073.156Pundamilia_nyererei
ENSORLG00000008288atxn1b9942.045ENSPNAG00000010587atxn1a9942.644Pygocentrus_nattereri
ENSORLG00000008288atxn1b9940.864ENSPNAG00000001226atxn1b10040.552Pygocentrus_nattereri
ENSORLG00000008288atxn1b9939.096ENSRNOG00000016998Atxn19939.008Rattus_norvegicus
ENSORLG00000008288atxn1b9938.496ENSRBIG00000028213ATXN19938.445Rhinopithecus_bieti
ENSORLG00000008288atxn1b9938.821ENSRROG00000032751ATXN19938.656Rhinopithecus_roxellana
ENSORLG00000008288atxn1b7535.598ENSSBOG00000030307-9134.757Saimiri_boliviensis_boliviensis
ENSORLG00000008288atxn1b9938.883ENSSBOG00000017381-9938.989Saimiri_boliviensis_boliviensis
ENSORLG00000008288atxn1b9943.458ENSSFOG00015000179atxn1b9942.679Scleropages_formosus
ENSORLG00000008288atxn1b9739.468ENSSMAG00000007731atxn1a9439.839Scophthalmus_maximus
ENSORLG00000008288atxn1b10078.443ENSSMAG00000019621atxn1b10078.323Scophthalmus_maximus
ENSORLG00000008288atxn1b10081.175ENSSDUG00000006990atxn1b10081.295Seriola_dumerili
ENSORLG00000008288atxn1b9941.065ENSSDUG00000011376atxn1a9941.321Seriola_dumerili
ENSORLG00000008288atxn1b10081.295ENSSLDG00000016306atxn1b10081.415Seriola_lalandi_dorsalis
ENSORLG00000008288atxn1b9940.733ENSSLDG00000013505atxn1a9941.209Seriola_lalandi_dorsalis
ENSORLG00000008288atxn1b9938.462ENSSPUG00000016650ATXN19938.209Sphenodon_punctatus
ENSORLG00000008288atxn1b9941.124ENSSPAG00000019849atxn1a9940.649Stegastes_partitus
ENSORLG00000008288atxn1b10081.731ENSSPAG00000003388atxn1b10081.851Stegastes_partitus
ENSORLG00000008288atxn1b9938.258ENSSSCG00000001065ATXN19937.707Sus_scrofa
ENSORLG00000008288atxn1b9937.472ENSTGUG00000005986ATXN19937.993Taeniopygia_guttata
ENSORLG00000008288atxn1b9940.611ENSTRUG00000014645atxn1a9940.519Takifugu_rubripes
ENSORLG00000008288atxn1b9968.892ENSTRUG00000024789atxn1b9970.758Takifugu_rubripes
ENSORLG00000008288atxn1b9969.268ENSTNIG00000018398atxn1b9969.146Tetraodon_nigroviridis
ENSORLG00000008288atxn1b9940.899ENSTNIG00000005089atxn1a9939.726Tetraodon_nigroviridis
ENSORLG00000008288atxn1b9838.782ENSTTRG00000014678ATXN19638.851Tursiops_truncatus
ENSORLG00000008288atxn1b9938.143ENSUAMG00000004064ATXN19938.281Ursus_americanus
ENSORLG00000008288atxn1b5243.737ENSUMAG00000017635-9244.632Ursus_maritimus
ENSORLG00000008288atxn1b9939.000ENSVVUG00000003386ATXN19939.246Vulpes_vulpes
ENSORLG00000008288atxn1b9937.585ENSXETG00000014184atxn19937.571Xenopus_tropicalis
ENSORLG00000008288atxn1b10071.584ENSXCOG00000019714atxn1b10072.189Xiphophorus_couchianus
ENSORLG00000008288atxn1b9938.657ENSXCOG00000020061atxn1a9937.860Xiphophorus_couchianus
ENSORLG00000008288atxn1b9938.194ENSXMAG00000003615atxn1a9938.117Xiphophorus_maculatus
ENSORLG00000008288atxn1b10077.431ENSXMAG00000014270atxn1b10078.031Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us