EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008403 (Gene tree)
Gene ID: 101160654
Gene Symbol: chd2
Alias: -
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 13684 bases
Position: chr6:18248306-18261989
Accession: 101160654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000034362	ResIII	PF04851.15	6.1e-08	1	1
ENSORLP00000044453	ResIII	PF04851.15	1.4e-06	1	1
ENSORLP00000010555	ResIII	PF04851.15	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000034016	-	1875	-	ENSORLP00000034362	624 (aa)	-	-
ENSORLT00000010556	-	5448	XM_011476140	ENSORLP00000010555	1815 (aa)	XP_011474442	H2LWR3
ENSORLT00000038623	-	5325	XM_011476141	ENSORLP00000044453	1774 (aa)	XP_011474443	UPI0005CC8266

Gene Model

Click here to download ENSORLG00000008403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008403	chd2	100	70.483	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSORLG00000008403	chd2	100	91.109	ENSAPOG00000008913	chd2	100	91.109	Acanthochromis_polyacanthus
ENSORLG00000008403	chd2	94	65.736	ENSAMEG00000010805	-	93	76.895	Ailuropoda_melanoleuca
ENSORLG00000008403	chd2	100	87.747	ENSAOCG00000016332	chd2	100	87.637	Amphiprion_ocellaris
ENSORLG00000008403	chd2	100	91.165	ENSAPEG00000016676	chd2	100	91.165	Amphiprion_percula
ENSORLG00000008403	chd2	100	90.321	ENSATEG00000005246	chd2	100	90.321	Anabas_testudineus
ENSORLG00000008403	chd2	99	70.890	ENSAPLG00000011141	-	99	70.726	Anas_platyrhynchos
ENSORLG00000008403	chd2	97	69.171	ENSACAG00000000088	-	95	69.802	Anolis_carolinensis
ENSORLG00000008403	chd2	100	70.500	ENSANAG00000024017	-	96	72.007	Aotus_nancymaae
ENSORLG00000008403	chd2	98	85.394	ENSACLG00000021370	chd2	98	95.294	Astatotilapia_calliptera
ENSORLG00000008403	chd2	68	78.066	ENSBTAG00000017776	CHD2	99	81.420	Bos_taurus
ENSORLG00000008403	chd2	100	70.392	ENSCJAG00000020444	-	96	72.007	Callithrix_jacchus
ENSORLG00000008403	chd2	99	71.048	ENSCAFG00000010998	CHD2	98	72.140	Canis_familiaris
ENSORLG00000008403	chd2	99	70.076	ENSCHIG00000022261	-	96	71.011	Capra_hircus
ENSORLG00000008403	chd2	100	70.876	ENSTSYG00000003272	-	95	73.529	Carlito_syrichta
ENSORLG00000008403	chd2	93	74.212	ENSCPOG00000005800	-	95	76.728	Cavia_porcellus
ENSORLG00000008403	chd2	100	70.553	ENSCCAG00000035304	-	96	72.063	Cebus_capucinus
ENSORLG00000008403	chd2	100	70.374	ENSCATG00000031069	-	96	71.798	Cercocebus_atys
ENSORLG00000008403	chd2	100	70.516	ENSCLAG00000016269	-	96	71.573	Chinchilla_lanigera
ENSORLG00000008403	chd2	100	70.429	ENSCSAG00000017007	-	96	71.854	Chlorocebus_sabaeus
ENSORLG00000008403	chd2	73	80.616	ENSCHOG00000000608	-	75	80.706	Choloepus_hoffmanni
ENSORLG00000008403	chd2	80	76.036	ENSCPBG00000018049	-	94	85.556	Chrysemys_picta_bellii
ENSORLG00000008403	chd2	75	54.721	ENSCSAVG00000007580	-	93	57.862	Ciona_savignyi
ENSORLG00000008403	chd2	100	70.429	ENSCANG00000038126	-	96	71.854	Colobus_angolensis_palliatus
ENSORLG00000008403	chd2	100	71.091	ENSCGRG00001006649	Chd2	96	71.782	Cricetulus_griseus_chok1gshd
ENSORLG00000008403	chd2	100	71.091	ENSCGRG00000018154	Chd2	96	71.782	Cricetulus_griseus_crigri
ENSORLG00000008403	chd2	98	75.761	ENSCSEG00000003646	chd2	95	92.941	Cynoglossus_semilaevis
ENSORLG00000008403	chd2	98	83.399	ENSCVAG00000002427	chd2	100	79.505	Cyprinodon_variegatus
ENSORLG00000008403	chd2	100	80.022	ENSDARG00000060687	chd2	100	80.820	Danio_rerio
ENSORLG00000008403	chd2	99	70.754	ENSDNOG00000009796	-	96	71.814	Dasypus_novemcinctus
ENSORLG00000008403	chd2	55	70.528	ENSEBUG00000014994	chd2	85	69.975	Eptatretus_burgeri
ENSORLG00000008403	chd2	98	72.396	ENSEASG00005015526	-	97	81.818	Equus_asinus_asinus
ENSORLG00000008403	chd2	100	81.431	ENSELUG00000017981	chd2	97	93.103	Esox_lucius
ENSORLG00000008403	chd2	95	72.377	ENSFALG00000010369	-	99	71.429	Ficedula_albicollis
ENSORLG00000008403	chd2	100	70.700	ENSFDAG00000020651	-	96	71.629	Fukomys_damarensis
ENSORLG00000008403	chd2	96	89.000	ENSFHEG00000002119	chd2	100	89.000	Fundulus_heteroclitus
ENSORLG00000008403	chd2	95	81.908	ENSGMOG00000002890	chd2	99	82.081	Gadus_morhua
ENSORLG00000008403	chd2	99	71.242	ENSGALG00000006949	CHD2	99	71.133	Gallus_gallus
ENSORLG00000008403	chd2	99	85.145	ENSGAFG00000001905	chd2	97	86.805	Gambusia_affinis
ENSORLG00000008403	chd2	95	86.732	ENSGACG00000013246	chd2	99	86.790	Gasterosteus_aculeatus
ENSORLG00000008403	chd2	80	78.022	ENSGAGG00000013176	-	95	86.517	Gopherus_agassizii
ENSORLG00000008403	chd2	100	69.598	ENSGGOG00000015677	CHD2	96	70.995	Gorilla_gorilla
ENSORLG00000008403	chd2	100	89.109	ENSHBUG00000017947	chd2	98	95.294	Haplochromis_burtoni
ENSORLG00000008403	chd2	100	70.646	ENSHGLG00000004435	CHD2	96	71.573	Heterocephalus_glaber_female
ENSORLG00000008403	chd2	100	70.320	ENSHGLG00100016376	-	96	71.180	Heterocephalus_glaber_male
ENSORLG00000008403	chd2	99	78.599	ENSHCOG00000008855	chd2	92	86.000	Hippocampus_comes
ENSORLG00000008403	chd2	79	81.136	ENSIPUG00000000488	chd2	98	76.467	Ictalurus_punctatus
ENSORLG00000008403	chd2	100	70.754	ENSSTOG00000001270	-	96	71.854	Ictidomys_tridecemlineatus
ENSORLG00000008403	chd2	100	70.250	ENSJJAG00000000213	Chd2	96	71.726	Jaculus_jaculus
ENSORLG00000008403	chd2	84	88.212	ENSKMAG00000015849	chd2	99	88.480	Kryptolebias_marmoratus
ENSORLG00000008403	chd2	88	67.720	ENSLAFG00000016885	-	98	80.969	Loxodonta_africana
ENSORLG00000008403	chd2	100	70.429	ENSMFAG00000033343	-	96	71.854	Macaca_fascicularis
ENSORLG00000008403	chd2	100	70.429	ENSMMUG00000011782	-	96	71.854	Macaca_mulatta
ENSORLG00000008403	chd2	100	70.190	ENSMNEG00000036875	-	96	71.605	Macaca_nemestrina
ENSORLG00000008403	chd2	100	70.429	ENSMLEG00000035026	-	96	71.854	Mandrillus_leucophaeus
ENSORLG00000008403	chd2	100	90.264	ENSMAMG00000009082	chd2	100	90.264	Mastacembelus_armatus
ENSORLG00000008403	chd2	98	85.394	ENSMZEG00005021333	chd2	98	95.294	Maylandia_zebra
ENSORLG00000008403	chd2	98	71.311	ENSMGAG00000008966	-	96	71.866	Meleagris_gallopavo
ENSORLG00000008403	chd2	99	70.143	ENSMICG00000000332	-	98	69.839	Microcebus_murinus
ENSORLG00000008403	chd2	100	70.838	ENSMOCG00000015124	Chd2	96	71.798	Microtus_ochrogaster
ENSORLG00000008403	chd2	99	72.113	ENSMODG00000013158	-	95	72.825	Monodelphis_domestica
ENSORLG00000008403	chd2	98	86.735	ENSMALG00000007755	chd2	96	92.941	Monopterus_albus
ENSORLG00000008403	chd2	100	71.183	MGP_CAROLIEiJ_G0029860	Chd2	96	71.991	Mus_caroli
ENSORLG00000008403	chd2	100	70.768	ENSMUSG00000078671	Chd2	96	72.007	Mus_musculus
ENSORLG00000008403	chd2	100	71.075	MGP_PahariEiJ_G0013082	Chd2	96	71.822	Mus_pahari
ENSORLG00000008403	chd2	100	71.145	MGP_SPRETEiJ_G0030962	Chd2	96	71.951	Mus_spretus
ENSORLG00000008403	chd2	100	70.876	ENSMPUG00000017577	-	96	71.894	Mustela_putorius_furo
ENSORLG00000008403	chd2	100	69.867	ENSMLUG00000009292	-	96	71.221	Myotis_lucifugus
ENSORLG00000008403	chd2	100	70.661	ENSNGAG00000010792	Chd2	96	71.726	Nannospalax_galili
ENSORLG00000008403	chd2	98	87.257	ENSNBRG00000020591	chd2	97	95.294	Neolamprologus_brichardi
ENSORLG00000008403	chd2	100	68.692	ENSNLEG00000012349	-	96	70.000	Nomascus_leucogenys
ENSORLG00000008403	chd2	62	86.463	ENSMEUG00000001522	-	67	79.592	Notamacropus_eugenii
ENSORLG00000008403	chd2	100	70.140	ENSODEG00000016028	-	96	71.236	Octodon_degus
ENSORLG00000008403	chd2	100	88.944	ENSONIG00000015136	chd2	100	90.319	Oreochromis_niloticus
ENSORLG00000008403	chd2	86	69.437	ENSOANG00000004385	-	98	69.094	Ornithorhynchus_anatinus
ENSORLG00000008403	chd2	100	66.411	ENSOCUG00000001628	-	92	77.469	Oryctolagus_cuniculus
ENSORLG00000008403	chd2	100	99.504	ENSORLG00020004138	chd2	100	99.504	Oryzias_latipes_hni
ENSORLG00000008403	chd2	99	97.419	ENSORLG00015017721	chd2	99	97.419	Oryzias_latipes_hsok
ENSORLG00000008403	chd2	96	92.661	ENSOMEG00000005831	chd2	100	87.466	Oryzias_melastigma
ENSORLG00000008403	chd2	100	69.072	ENSOGAG00000010399	-	96	70.225	Otolemur_garnettii
ENSORLG00000008403	chd2	100	71.389	ENSOARG00000010343	-	96	72.628	Ovis_aries
ENSORLG00000008403	chd2	100	69.788	ENSPPAG00000030381	-	96	71.534	Pan_paniscus
ENSORLG00000008403	chd2	100	70.429	ENSPTRG00000007478	CHD2	96	71.854	Pan_troglodytes
ENSORLG00000008403	chd2	100	67.723	ENSPANG00000033355	-	96	69.045	Papio_anubis
ENSORLG00000008403	chd2	100	80.744	ENSPKIG00000000495	chd2	100	80.470	Paramormyrops_kingsleyae
ENSORLG00000008403	chd2	84	83.443	ENSPMGG00000009941	chd2	99	83.366	Periophthalmus_magnuspinnatus
ENSORLG00000008403	chd2	100	70.983	ENSPEMG00000019507	Chd2	96	71.726	Peromyscus_maniculatus_bairdii
ENSORLG00000008403	chd2	92	73.393	ENSPCIG00000009417	-	99	76.337	Phascolarctos_cinereus
ENSORLG00000008403	chd2	100	88.064	ENSPFOG00000007050	chd2	100	89.219	Poecilia_formosa
ENSORLG00000008403	chd2	81	58.465	ENSPFOG00000000291	-	94	58.963	Poecilia_formosa
ENSORLG00000008403	chd2	100	88.284	ENSPLAG00000005067	chd2	100	89.219	Poecilia_latipinna
ENSORLG00000008403	chd2	100	88.633	ENSPMEG00000019628	chd2	100	89.645	Poecilia_mexicana
ENSORLG00000008403	chd2	100	69.181	ENSPPYG00000006799	-	96	70.674	Pongo_abelii
ENSORLG00000008403	chd2	100	70.754	ENSPCOG00000028084	-	96	71.798	Propithecus_coquereli
ENSORLG00000008403	chd2	98	85.221	ENSPNYG00000010273	chd2	98	95.294	Pundamilia_nyererei
ENSORLG00000008403	chd2	99	74.295	ENSPNAG00000016719	chd2	96	76.905	Pygocentrus_nattereri
ENSORLG00000008403	chd2	100	71.145	ENSRNOG00000012716	Chd2	96	71.951	Rattus_norvegicus
ENSORLG00000008403	chd2	100	69.110	ENSRBIG00000036875	-	96	70.489	Rhinopithecus_bieti
ENSORLG00000008403	chd2	100	70.483	ENSRROG00000041087	-	96	71.910	Rhinopithecus_roxellana
ENSORLG00000008403	chd2	100	70.500	ENSSBOG00000023754	-	96	72.119	Saimiri_boliviensis_boliviensis
ENSORLG00000008403	chd2	99	72.168	ENSSHAG00000012513	-	95	72.882	Sarcophilus_harrisii
ENSORLG00000008403	chd2	100	81.907	ENSSFOG00015023759	chd2	100	80.327	Scleropages_formosus
ENSORLG00000008403	chd2	100	88.950	ENSSMAG00000001726	chd2	100	88.785	Scophthalmus_maximus
ENSORLG00000008403	chd2	98	88.357	ENSSLDG00000001146	chd2	98	94.118	Seriola_lalandi_dorsalis
ENSORLG00000008403	chd2	76	81.667	ENSSARG00000014112	-	74	81.667	Sorex_araneus
ENSORLG00000008403	chd2	99	68.809	ENSSPUG00000011266	-	96	71.180	Sphenodon_punctatus
ENSORLG00000008403	chd2	98	87.714	ENSSPAG00000016452	chd2	97	95.294	Stegastes_partitus
ENSORLG00000008403	chd2	100	70.700	ENSSSCG00000002266	-	100	73.681	Sus_scrofa
ENSORLG00000008403	chd2	95	72.181	ENSTGUG00000008540	-	99	71.351	Taeniopygia_guttata
ENSORLG00000008403	chd2	98	82.411	ENSTRUG00000008842	chd2	91	82.250	Takifugu_rubripes
ENSORLG00000008403	chd2	96	88.785	ENSTNIG00000010760	chd2	96	86.233	Tetraodon_nigroviridis
ENSORLG00000008403	chd2	94	62.636	ENSTBEG00000017730	-	78	70.044	Tupaia_belangeri
ENSORLG00000008403	chd2	90	73.556	ENSTTRG00000000430	-	90	73.829	Tursiops_truncatus
ENSORLG00000008403	chd2	100	69.380	ENSUMAG00000000083	-	96	70.389	Ursus_maritimus
ENSORLG00000008403	chd2	84	86.799	ENSVPAG00000009645	-	81	86.799	Vicugna_pacos
ENSORLG00000008403	chd2	88	68.318	ENSXETG00000024129	chd2	98	68.279	Xenopus_tropicalis
ENSORLG00000008403	chd2	99	84.672	ENSXCOG00000020255	chd2	99	88.235	Xiphophorus_couchianus
ENSORLG00000008403	chd2	100	87.957	ENSXMAG00000002707	chd2	100	89.364	Xiphophorus_maculatus