EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008435 (Gene tree)
Gene ID: 101162384
Gene Symbol: setd1ba
Alias: -
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 11404 bases
Position: chr12:13823168-13834571
Accession: 101162384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010594	RRM_1	PF00076.22	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000010595	-	5238	XM_011481827	ENSORLP00000010594	1745 (aa)	XP_011480129	H2LWU9

Gene Model

Click here to download ENSORLG00000008435's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008435's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008435	setd1ba	52	80.878	ENSG00000139718	SETD1B	71	79.448	Homo_sapiens
ENSORLG00000008435	setd1ba	100	72.179	ENSACIG00000016453	setd1ba	100	72.029	Amphilophus_citrinellus
ENSORLG00000008435	setd1ba	55	82.266	ENSAOCG00000012148	setd1ba	99	77.109	Amphiprion_ocellaris
ENSORLG00000008435	setd1ba	100	77.796	ENSAPEG00000010762	setd1ba	99	77.300	Amphiprion_percula
ENSORLG00000008435	setd1ba	92	77.982	ENSATEG00000021563	setd1ba	99	78.645	Anabas_testudineus
ENSORLG00000008435	setd1ba	86	57.757	ENSAPLG00000005217	SETD1B	83	57.757	Anas_platyrhynchos
ENSORLG00000008435	setd1ba	55	81.219	ENSACLG00000016584	setd1ba	100	76.789	Astatotilapia_calliptera
ENSORLG00000008435	setd1ba	52	81.191	ENSCCAG00000031928	SETD1B	69	79.755	Cebus_capucinus
ENSORLG00000008435	setd1ba	59	68.421	ENSCATG00000035417	SETD1A	66	58.987	Cercocebus_atys
ENSORLG00000008435	setd1ba	91	64.211	ENSCPBG00000026067	SETD1B	85	56.923	Chrysemys_picta_bellii
ENSORLG00000008435	setd1ba	52	73.913	ENSELUG00000022712	-	80	49.776	Esox_lucius
ENSORLG00000008435	setd1ba	55	76.581	ENSFHEG00000013126	setd1ba	55	75.889	Fundulus_heteroclitus
ENSORLG00000008435	setd1ba	52	87.736	ENSGMOG00000009831	setd1ba	59	87.736	Gadus_morhua
ENSORLG00000008435	setd1ba	72	74.271	ENSGALG00000004324	SETD1B	82	58.372	Gallus_gallus
ENSORLG00000008435	setd1ba	89	79.160	ENSGAFG00000008712	setd1ba	88	79.117	Gambusia_affinis
ENSORLG00000008435	setd1ba	90	71.637	ENSGACG00000017002	setd1ba	57	71.784	Gasterosteus_aculeatus
ENSORLG00000008435	setd1ba	70	54.240	ENSGAGG00000025013	SETD1B	84	57.710	Gopherus_agassizii
ENSORLG00000008435	setd1ba	55	81.119	ENSHBUG00000019992	setd1ba	55	81.918	Haplochromis_burtoni
ENSORLG00000008435	setd1ba	100	73.341	ENSHCOG00000001951	setd1ba	99	72.826	Hippocampus_comes
ENSORLG00000008435	setd1ba	55	75.694	ENSKMAG00000007804	setd1ba	99	72.512	Kryptolebias_marmoratus
ENSORLG00000008435	setd1ba	75	63.363	ENSLOCG00000005190	setd1ba	92	61.257	Lepisosteus_oculatus
ENSORLG00000008435	setd1ba	70	78.750	ENSLAFG00000026518	SETD1B	72	78.750	Loxodonta_africana
ENSORLG00000008435	setd1ba	59	61.716	ENSLAFG00000023335	SETD1A	65	53.213	Loxodonta_africana
ENSORLG00000008435	setd1ba	59	68.421	ENSMLEG00000030176	SETD1A	65	59.596	Mandrillus_leucophaeus
ENSORLG00000008435	setd1ba	100	75.692	ENSMAMG00000011027	setd1ba	100	75.303	Mastacembelus_armatus
ENSORLG00000008435	setd1ba	55	81.219	ENSMZEG00005026617	setd1ba	100	76.789	Maylandia_zebra
ENSORLG00000008435	setd1ba	65	83.601	ENSMGAG00000004421	SETD1B	66	78.932	Meleagris_gallopavo
ENSORLG00000008435	setd1ba	100	76.198	ENSMMOG00000008190	setd1ba	99	76.435	Mola_mola
ENSORLG00000008435	setd1ba	55	81.238	ENSNBRG00000002915	setd1ba	99	75.972	Neolamprologus_brichardi
ENSORLG00000008435	setd1ba	66	81.191	ENSNLEG00000001254	SETD1B	72	79.755	Nomascus_leucogenys
ENSORLG00000008435	setd1ba	52	80.251	ENSODEG00000010155	SETD1B	66	78.834	Octodon_degus
ENSORLG00000008435	setd1ba	55	80.519	ENSONIG00000013898	setd1ba	55	81.718	Oreochromis_niloticus
ENSORLG00000008435	setd1ba	100	97.953	ENSORLG00020017079	setd1ba	100	97.953	Oryzias_latipes_hni
ENSORLG00000008435	setd1ba	67	92.510	ENSORLG00015004156	setd1ba	100	92.510	Oryzias_latipes_hsok
ENSORLG00000008435	setd1ba	56	92.028	ENSOMEG00000002270	setd1ba	100	87.340	Oryzias_melastigma
ENSORLG00000008435	setd1ba	67	81.191	ENSOGAG00000034809	SETD1B	67	79.755	Otolemur_garnettii
ENSORLG00000008435	setd1ba	70	81.191	ENSPPAG00000043308	SETD1B	69	79.755	Pan_paniscus
ENSORLG00000008435	setd1ba	59	68.421	ENSPANG00000025141	SETD1A	66	58.987	Papio_anubis
ENSORLG00000008435	setd1ba	88	57.986	ENSPKIG00000023115	setd1ba	88	60.144	Paramormyrops_kingsleyae
ENSORLG00000008435	setd1ba	90	76.578	ENSPMGG00000011527	setd1ba	89	76.910	Periophthalmus_magnuspinnatus
ENSORLG00000008435	setd1ba	61	68.078	ENSPEMG00000024243	-	94	50.862	Peromyscus_maniculatus_bairdii
ENSORLG00000008435	setd1ba	69	79.245	ENSPCIG00000028605	SETD1B	87	56.019	Phascolarctos_cinereus
ENSORLG00000008435	setd1ba	55	74.384	ENSPFOG00000019768	setd1ba	100	71.809	Poecilia_formosa
ENSORLG00000008435	setd1ba	55	75.794	ENSPLAG00000023459	setd1ba	100	71.336	Poecilia_latipinna
ENSORLG00000008435	setd1ba	55	77.106	ENSPMEG00000020446	setd1ba	100	72.189	Poecilia_mexicana
ENSORLG00000008435	setd1ba	55	76.680	ENSPREG00000011589	setd1ba	55	76.710	Poecilia_reticulata
ENSORLG00000008435	setd1ba	56	80.452	ENSPNYG00000009484	setd1ba	99	75.972	Pundamilia_nyererei
ENSORLG00000008435	setd1ba	53	73.354	ENSRNOG00000001337	Setd1b	59	72.086	Rattus_norvegicus
ENSORLG00000008435	setd1ba	52	49.357	ENSRBIG00000034516	SETD1B	68	79.755	Rhinopithecus_bieti
ENSORLG00000008435	setd1ba	70	69.543	ENSSFOG00015004814	SETD1B	88	73.003	Scleropages_formosus
ENSORLG00000008435	setd1ba	100	73.039	ENSSMAG00000001244	setd1ba	99	73.629	Scophthalmus_maximus
ENSORLG00000008435	setd1ba	55	81.145	ENSSDUG00000018313	setd1ba	100	76.300	Seriola_dumerili
ENSORLG00000008435	setd1ba	55	81.145	ENSSLDG00000015543	setd1ba	99	75.504	Seriola_lalandi_dorsalis
ENSORLG00000008435	setd1ba	100	77.741	ENSSPAG00000015470	setd1ba	100	78.026	Stegastes_partitus
ENSORLG00000008435	setd1ba	70	81.447	ENSSSCG00000009806	SETD1B	88	59.418	Sus_scrofa
ENSORLG00000008435	setd1ba	99	71.775	ENSTRUG00000009533	setd1ba	100	71.155	Takifugu_rubripes
ENSORLG00000008435	setd1ba	100	72.867	ENSTNIG00000009090	setd1ba	100	72.380	Tetraodon_nigroviridis
ENSORLG00000008435	setd1ba	67	78.550	ENSUAMG00000008729	SETD1B	64	78.550	Ursus_americanus
ENSORLG00000008435	setd1ba	61	46.604	ENSXETG00000003760	setd1b	82	58.692	Xenopus_tropicalis