EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008688 (Gene tree)
Gene ID: 101167475
Gene Symbol: rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 15803 bases
Position: chr15:23468797-23484599
Accession: 101167475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010905	NUC173	PF08161.12	2.3e-74	1	1
ENSORLP00000010908	NUC173	PF08161.12	3.3e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000010906	-	5103	-	ENSORLP00000010905	1182 (aa)	-	H2LXP3
ENSORLT00000010909	-	4800	XM_004077163	ENSORLP00000010908	1288 (aa)	XP_004077211	H2LXP6

Gene Model

Click here to download ENSORLG00000008688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008688	rrp12	99	64.652	ENSG00000052749	RRP12	100	78.125	Homo_sapiens
ENSORLG00000008688	rrp12	98	87.715	ENSAPOG00000013355	rrp12	99	85.125	Acanthochromis_polyacanthus
ENSORLG00000008688	rrp12	99	64.376	ENSAMEG00000000134	RRP12	99	64.087	Ailuropoda_melanoleuca
ENSORLG00000008688	rrp12	99	86.610	ENSACIG00000022673	rrp12	99	86.552	Amphilophus_citrinellus
ENSORLG00000008688	rrp12	99	87.797	ENSAOCG00000016149	rrp12	99	87.734	Amphiprion_ocellaris
ENSORLG00000008688	rrp12	98	87.543	ENSAPEG00000016023	rrp12	99	86.371	Amphiprion_percula
ENSORLG00000008688	rrp12	99	85.871	ENSATEG00000022627	rrp12	99	85.803	Anabas_testudineus
ENSORLG00000008688	rrp12	97	60.367	ENSAPLG00000014387	RRP12	99	60.915	Anas_platyrhynchos
ENSORLG00000008688	rrp12	99	59.599	ENSACAG00000002175	RRP12	99	59.581	Anolis_carolinensis
ENSORLG00000008688	rrp12	92	75.000	ENSANAG00000037485	RRP12	99	75.000	Aotus_nancymaae
ENSORLG00000008688	rrp12	99	85.614	ENSACLG00000007354	rrp12	99	85.938	Astatotilapia_calliptera
ENSORLG00000008688	rrp12	99	74.576	ENSAMXG00000012852	rrp12	99	74.531	Astyanax_mexicanus
ENSORLG00000008688	rrp12	99	63.392	ENSBTAG00000002191	RRP12	99	63.052	Bos_taurus
ENSORLG00000008688	rrp12	85	61.364	ENSCJAG00000016549	-	99	61.644	Callithrix_jacchus
ENSORLG00000008688	rrp12	99	64.268	ENSCAFG00000009043	RRP12	99	63.854	Canis_familiaris
ENSORLG00000008688	rrp12	99	64.268	ENSCAFG00020005991	RRP12	99	63.854	Canis_lupus_dingo
ENSORLG00000008688	rrp12	99	63.003	ENSCHIG00000011876	RRP12	99	60.695	Capra_hircus
ENSORLG00000008688	rrp12	53	54.598	ENSTSYG00000030210	-	98	55.669	Carlito_syrichta
ENSORLG00000008688	rrp12	97	57.188	ENSCAPG00000008991	RRP12	97	57.339	Cavia_aperea
ENSORLG00000008688	rrp12	99	63.990	ENSCPOG00000004215	RRP12	99	62.879	Cavia_porcellus
ENSORLG00000008688	rrp12	70	58.132	ENSCCAG00000033123	-	82	57.901	Cebus_capucinus
ENSORLG00000008688	rrp12	79	66.913	ENSCCAG00000024088	RRP12	98	68.657	Cebus_capucinus
ENSORLG00000008688	rrp12	99	60.738	ENSCATG00000045310	RRP12	99	59.799	Cercocebus_atys
ENSORLG00000008688	rrp12	100	62.558	ENSCLAG00000003753	RRP12	99	61.872	Chinchilla_lanigera
ENSORLG00000008688	rrp12	88	62.337	ENSCSAG00000005877	RRP12	99	62.742	Chlorocebus_sabaeus
ENSORLG00000008688	rrp12	56	71.429	ENSCHOG00000003095	-	60	71.381	Choloepus_hoffmanni
ENSORLG00000008688	rrp12	94	63.809	ENSCPBG00000011935	RRP12	96	63.877	Chrysemys_picta_bellii
ENSORLG00000008688	rrp12	64	40.355	ENSCSAVG00000006059	-	99	40.311	Ciona_savignyi
ENSORLG00000008688	rrp12	98	65.835	ENSCANG00000031653	RRP12	90	75.000	Colobus_angolensis_palliatus
ENSORLG00000008688	rrp12	90	62.938	ENSCGRG00001004338	Rrp12	99	63.348	Cricetulus_griseus_chok1gshd
ENSORLG00000008688	rrp12	99	63.246	ENSCGRG00000011965	Rrp12	99	63.043	Cricetulus_griseus_crigri
ENSORLG00000008688	rrp12	99	83.136	ENSCSEG00000007799	rrp12	99	83.307	Cynoglossus_semilaevis
ENSORLG00000008688	rrp12	99	85.847	ENSCVAG00000003418	rrp12	99	85.859	Cyprinodon_variegatus
ENSORLG00000008688	rrp12	99	72.250	ENSDARG00000022410	rrp12	99	72.756	Danio_rerio
ENSORLG00000008688	rrp12	99	62.886	ENSDNOG00000005120	RRP12	99	62.771	Dasypus_novemcinctus
ENSORLG00000008688	rrp12	98	64.797	ENSDORG00000009199	Rrp12	99	63.826	Dipodomys_ordii
ENSORLG00000008688	rrp12	98	30.253	FBgn0030504	CG2691	99	30.344	Drosophila_melanogaster
ENSORLG00000008688	rrp12	91	68.571	ENSETEG00000002455	RRP12	91	68.571	Echinops_telfairi
ENSORLG00000008688	rrp12	86	51.250	ENSEBUG00000006555	rrp12	98	69.231	Eptatretus_burgeri
ENSORLG00000008688	rrp12	99	63.919	ENSEASG00005008693	RRP12	99	63.848	Equus_asinus_asinus
ENSORLG00000008688	rrp12	99	61.648	ENSECAG00000010892	RRP12	99	63.584	Equus_caballus
ENSORLG00000008688	rrp12	63	59.412	ENSEEUG00000005447	-	64	59.412	Erinaceus_europaeus
ENSORLG00000008688	rrp12	100	77.030	ENSELUG00000010510	rrp12	100	76.630	Esox_lucius
ENSORLG00000008688	rrp12	99	64.178	ENSFCAG00000028639	RRP12	99	64.087	Felis_catus
ENSORLG00000008688	rrp12	94	63.033	ENSFALG00000008458	RRP12	99	63.772	Ficedula_albicollis
ENSORLG00000008688	rrp12	99	63.721	ENSFDAG00000019108	RRP12	95	63.064	Fukomys_damarensis
ENSORLG00000008688	rrp12	99	77.691	ENSFHEG00000004148	rrp12	99	77.691	Fundulus_heteroclitus
ENSORLG00000008688	rrp12	99	72.774	ENSGMOG00000004188	rrp12	99	70.170	Gadus_morhua
ENSORLG00000008688	rrp12	99	63.153	ENSGALG00000041331	RRP12	96	63.939	Gallus_gallus
ENSORLG00000008688	rrp12	99	85.775	ENSGAFG00000009038	rrp12	99	85.714	Gambusia_affinis
ENSORLG00000008688	rrp12	99	82.881	ENSGACG00000007175	rrp12	99	82.344	Gasterosteus_aculeatus
ENSORLG00000008688	rrp12	73	66.053	ENSGAGG00000019169	RRP12	99	63.566	Gopherus_agassizii
ENSORLG00000008688	rrp12	99	64.819	ENSGGOG00000014850	RRP12	99	64.291	Gorilla_gorilla
ENSORLG00000008688	rrp12	99	85.692	ENSHBUG00000023527	rrp12	99	86.016	Haplochromis_burtoni
ENSORLG00000008688	rrp12	99	63.919	ENSHGLG00000016772	RRP12	99	63.142	Heterocephalus_glaber_female
ENSORLG00000008688	rrp12	99	63.919	ENSHGLG00100015110	RRP12	99	63.142	Heterocephalus_glaber_male
ENSORLG00000008688	rrp12	99	81.287	ENSHCOG00000019519	rrp12	99	80.219	Hippocampus_comes
ENSORLG00000008688	rrp12	99	72.636	ENSIPUG00000000311	RRP12	99	73.500	Ictalurus_punctatus
ENSORLG00000008688	rrp12	99	64.424	ENSSTOG00000006515	RRP12	99	63.764	Ictidomys_tridecemlineatus
ENSORLG00000008688	rrp12	96	63.255	ENSJJAG00000000110	Rrp12	98	62.130	Jaculus_jaculus
ENSORLG00000008688	rrp12	99	85.763	ENSKMAG00000020621	rrp12	99	85.938	Kryptolebias_marmoratus
ENSORLG00000008688	rrp12	98	82.560	ENSLBEG00000015335	rrp12	99	80.844	Labrus_bergylta
ENSORLG00000008688	rrp12	75	64.794	ENSLACG00000016633	RRP12	80	64.794	Latimeria_chalumnae
ENSORLG00000008688	rrp12	99	69.479	ENSLOCG00000003846	rrp12	99	69.498	Lepisosteus_oculatus
ENSORLG00000008688	rrp12	99	64.034	ENSLAFG00000015965	RRP12	99	63.158	Loxodonta_africana
ENSORLG00000008688	rrp12	98	65.749	ENSMFAG00000041558	RRP12	90	74.342	Macaca_fascicularis
ENSORLG00000008688	rrp12	98	65.749	ENSMMUG00000019634	RRP12	90	74.342	Macaca_mulatta
ENSORLG00000008688	rrp12	92	74.342	ENSMNEG00000036759	RRP12	89	74.342	Macaca_nemestrina
ENSORLG00000008688	rrp12	98	62.788	ENSMLEG00000041317	RRP12	90	75.000	Mandrillus_leucophaeus
ENSORLG00000008688	rrp12	99	85.849	ENSMAMG00000002964	rrp12	99	85.940	Mastacembelus_armatus
ENSORLG00000008688	rrp12	99	85.692	ENSMZEG00005003241	rrp12	99	86.016	Maylandia_zebra
ENSORLG00000008688	rrp12	99	61.355	ENSMGAG00000009829	RRP12	99	61.622	Meleagris_gallopavo
ENSORLG00000008688	rrp12	99	64.340	ENSMAUG00000020743	Rrp12	99	60.991	Mesocricetus_auratus
ENSORLG00000008688	rrp12	99	64.538	ENSMICG00000007624	RRP12	99	63.349	Microcebus_murinus
ENSORLG00000008688	rrp12	100	63.741	ENSMOCG00000006753	Rrp12	99	64.081	Microtus_ochrogaster
ENSORLG00000008688	rrp12	99	83.121	ENSMMOG00000010708	rrp12	99	82.500	Mola_mola
ENSORLG00000008688	rrp12	99	64.587	ENSMODG00000004315	RRP12	99	64.619	Monodelphis_domestica
ENSORLG00000008688	rrp12	99	84.420	ENSMALG00000016560	rrp12	99	84.420	Monopterus_albus
ENSORLG00000008688	rrp12	99	64.597	MGP_CAROLIEiJ_G0022957	Rrp12	99	63.566	Mus_caroli
ENSORLG00000008688	rrp12	99	64.622	ENSMUSG00000035049	Rrp12	99	64.081	Mus_musculus
ENSORLG00000008688	rrp12	100	63.972	MGP_PahariEiJ_G0014447	Rrp12	99	64.081	Mus_pahari
ENSORLG00000008688	rrp12	99	64.874	MGP_SPRETEiJ_G0023878	Rrp12	99	64.313	Mus_spretus
ENSORLG00000008688	rrp12	99	64.064	ENSMPUG00000017046	RRP12	99	64.009	Mustela_putorius_furo
ENSORLG00000008688	rrp12	99	63.987	ENSMLUG00000017160	RRP12	99	63.960	Myotis_lucifugus
ENSORLG00000008688	rrp12	99	64.508	ENSNGAG00000024144	Rrp12	99	63.820	Nannospalax_galili
ENSORLG00000008688	rrp12	99	85.043	ENSNBRG00000009987	rrp12	99	84.219	Neolamprologus_brichardi
ENSORLG00000008688	rrp12	99	56.711	ENSNLEG00000013762	RRP12	99	55.794	Nomascus_leucogenys
ENSORLG00000008688	rrp12	100	58.378	ENSMEUG00000003185	RRP12	99	58.755	Notamacropus_eugenii
ENSORLG00000008688	rrp12	94	67.388	ENSOPRG00000005001	RRP12	93	67.388	Ochotona_princeps
ENSORLG00000008688	rrp12	99	63.212	ENSODEG00000016439	RRP12	99	62.109	Octodon_degus
ENSORLG00000008688	rrp12	99	86.005	ENSONIG00000009528	rrp12	99	86.406	Oreochromis_niloticus
ENSORLG00000008688	rrp12	100	60.369	ENSOANG00000006560	RRP12	99	60.526	Ornithorhynchus_anatinus
ENSORLG00000008688	rrp12	99	64.226	ENSOCUG00000005662	RRP12	99	63.530	Oryctolagus_cuniculus
ENSORLG00000008688	rrp12	99	98.643	ENSORLG00020002355	rrp12	99	98.725	Oryzias_latipes_hni
ENSORLG00000008688	rrp12	100	98.680	ENSORLG00015006709	rrp12	100	98.680	Oryzias_latipes_hsok
ENSORLG00000008688	rrp12	99	95.420	ENSOMEG00000002609	rrp12	99	95.458	Oryzias_melastigma
ENSORLG00000008688	rrp12	99	63.728	ENSOGAG00000001626	RRP12	99	62.539	Otolemur_garnettii
ENSORLG00000008688	rrp12	99	62.448	ENSOARG00000009681	RRP12	99	61.978	Ovis_aries
ENSORLG00000008688	rrp12	99	63.591	ENSPPAG00000043885	RRP12	99	62.008	Pan_paniscus
ENSORLG00000008688	rrp12	99	64.178	ENSPPRG00000002029	RRP12	99	64.087	Panthera_pardus
ENSORLG00000008688	rrp12	99	60.893	ENSPTIG00000004428	RRP12	99	61.095	Panthera_tigris_altaica
ENSORLG00000008688	rrp12	99	63.674	ENSPTRG00000002806	RRP12	99	62.085	Pan_troglodytes
ENSORLG00000008688	rrp12	98	65.749	ENSPANG00000021360	RRP12	90	75.000	Papio_anubis
ENSORLG00000008688	rrp12	99	72.704	ENSPKIG00000016516	rrp12	99	72.593	Paramormyrops_kingsleyae
ENSORLG00000008688	rrp12	99	79.966	ENSPMGG00000020217	rrp12	99	80.125	Periophthalmus_magnuspinnatus
ENSORLG00000008688	rrp12	99	64.819	ENSPEMG00000008437	Rrp12	99	64.031	Peromyscus_maniculatus_bairdii
ENSORLG00000008688	rrp12	88	52.397	ENSPMAG00000007493	rrp12	99	46.737	Petromyzon_marinus
ENSORLG00000008688	rrp12	99	63.997	ENSPCIG00000002157	RRP12	99	63.735	Phascolarctos_cinereus
ENSORLG00000008688	rrp12	99	85.775	ENSPFOG00000014975	rrp12	99	85.636	Poecilia_formosa
ENSORLG00000008688	rrp12	99	85.690	ENSPLAG00000009840	rrp12	99	85.480	Poecilia_latipinna
ENSORLG00000008688	rrp12	99	85.775	ENSPMEG00000021871	rrp12	99	85.636	Poecilia_mexicana
ENSORLG00000008688	rrp12	98	84.786	ENSPREG00000020950	rrp12	99	82.676	Poecilia_reticulata
ENSORLG00000008688	rrp12	99	63.392	ENSPPYG00000002528	RRP12	99	62.974	Pongo_abelii
ENSORLG00000008688	rrp12	94	76.836	ENSPCAG00000008967	RRP12	94	76.836	Procavia_capensis
ENSORLG00000008688	rrp12	99	64.238	ENSPCOG00000014009	RRP12	99	63.264	Propithecus_coquereli
ENSORLG00000008688	rrp12	99	62.185	ENSPVAG00000003370	RRP12	99	60.978	Pteropus_vampyrus
ENSORLG00000008688	rrp12	99	86.005	ENSPNYG00000009451	rrp12	99	86.328	Pundamilia_nyererei
ENSORLG00000008688	rrp12	99	74.640	ENSPNAG00000007658	rrp12	99	74.491	Pygocentrus_nattereri
ENSORLG00000008688	rrp12	99	64.172	ENSRNOG00000048495	Rrp12	99	62.934	Rattus_norvegicus
ENSORLG00000008688	rrp12	98	65.835	ENSRBIG00000021296	RRP12	90	75.000	Rhinopithecus_bieti
ENSORLG00000008688	rrp12	98	65.835	ENSRROG00000032482	RRP12	90	75.000	Rhinopithecus_roxellana
ENSORLG00000008688	rrp12	92	73.684	ENSSBOG00000030992	RRP12	99	73.684	Saimiri_boliviensis_boliviensis
ENSORLG00000008688	rrp12	99	63.783	ENSSHAG00000018275	RRP12	99	63.211	Sarcophilus_harrisii
ENSORLG00000008688	rrp12	99	74.831	ENSSFOG00015016400	rrp12	99	75.156	Scleropages_formosus
ENSORLG00000008688	rrp12	99	85.132	ENSSMAG00000004047	rrp12	99	85.078	Scophthalmus_maximus
ENSORLG00000008688	rrp12	99	86.610	ENSSDUG00000022871	rrp12	99	86.562	Seriola_dumerili
ENSORLG00000008688	rrp12	99	86.356	ENSSLDG00000003038	rrp12	99	86.328	Seriola_lalandi_dorsalis
ENSORLG00000008688	rrp12	99	61.378	ENSSPUG00000012221	RRP12	99	61.664	Sphenodon_punctatus
ENSORLG00000008688	rrp12	99	88.305	ENSSPAG00000002261	rrp12	99	88.047	Stegastes_partitus
ENSORLG00000008688	rrp12	100	62.433	ENSSSCG00000010514	RRP12	99	62.839	Sus_scrofa
ENSORLG00000008688	rrp12	89	59.930	ENSTGUG00000009711	RRP12	99	60.667	Taeniopygia_guttata
ENSORLG00000008688	rrp12	99	77.542	ENSTRUG00000012017	rrp12	99	77.578	Takifugu_rubripes
ENSORLG00000008688	rrp12	99	83.088	ENSTNIG00000016522	rrp12	99	83.125	Tetraodon_nigroviridis
ENSORLG00000008688	rrp12	77	75.980	ENSTBEG00000004907	RRP12	79	75.980	Tupaia_belangeri
ENSORLG00000008688	rrp12	100	60.987	ENSTTRG00000009878	RRP12	99	61.305	Tursiops_truncatus
ENSORLG00000008688	rrp12	99	64.706	ENSUAMG00000009092	RRP12	99	64.192	Ursus_americanus
ENSORLG00000008688	rrp12	99	63.621	ENSUMAG00000021621	RRP12	99	62.355	Ursus_maritimus
ENSORLG00000008688	rrp12	99	64.351	ENSVVUG00000023168	RRP12	99	64.003	Vulpes_vulpes
ENSORLG00000008688	rrp12	99	66.272	ENSXETG00000003430	rrp12	99	65.759	Xenopus_tropicalis
ENSORLG00000008688	rrp12	98	84.450	ENSXCOG00000012082	rrp12	97	84.202	Xiphophorus_couchianus
ENSORLG00000008688	rrp12	99	85.605	ENSXMAG00000013498	rrp12	99	85.792	Xiphophorus_maculatus