EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008758 (Gene tree)
Gene ID: 101173181
Gene Symbol: pan3
Alias: -
Full Name: poly(A) specific ribonuclease subunit PAN3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 15936 bases
Position: chr20:17413120-17429055
Accession: 101173181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000011000	zf-CCCH	PF00642.24	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000011001	-	3115	XM_004081267	ENSORLP00000011000	788 (aa)	XP_004081315	H2LXY8

Gene Model

Click here to download ENSORLG00000008758's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008758	pan3	99	82.080	ENSELUG00000014375	pan3	99	82.080	Esox_lucius
ENSORLG00000008758	pan3	100	90.852	ENSKMAG00000008813	pan3	100	90.852	Kryptolebias_marmoratus
ENSORLG00000008758	pan3	100	69.321	ENSLACG00000017156	PAN3	100	70.746	Latimeria_chalumnae
ENSORLG00000008758	pan3	100	95.305	ENSORLG00015014393	pan3	100	95.305	Oryzias_latipes_hsok
ENSORLG00000008758	pan3	100	93.274	ENSOMEG00000007798	pan3	100	93.274	Oryzias_melastigma
ENSORLG00000008758	pan3	74	73.154	ENSPKIG00000008329	-	96	73.154	Paramormyrops_kingsleyae
ENSORLG00000008758	pan3	97	66.880	ENSPMAG00000002383	pan3	100	66.880	Petromyzon_marinus
ENSORLG00000008758	pan3	100	88.889	ENSPREG00000019582	pan3	100	88.384	Poecilia_reticulata
ENSORLG00000008758	pan3	100	92.686	ENSSMAG00000014517	pan3	98	92.686	Scophthalmus_maximus
ENSORLG00000008758	pan3	100	76.332	ENSXETG00000011794	pan3	100	76.580	Xenopus_tropicalis