EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000008776 (Gene tree)
Gene ID: 101157067
Gene Symbol: ptcd3
Alias: -
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 10646 bases
Position: chr10:24606229-24616874
Accession: 101157067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000033068	PPR	PF01535.20	5.9e-06	1	1
ENSORLP00000011022	PPR	PF01535.20	7.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000037254	-	4466	-	ENSORLP00000033068	650 (aa)	-	-
ENSORLT00000011023	-	2295	XM_004073549	ENSORLP00000011022	671 (aa)	XP_004073597	H2LY10

Gene Model

Click here to download ENSORLG00000008776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008776's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008776	ptcd3	92	75.654	ENSACIG00000022263	ptcd3	100	75.654	Amphilophus_citrinellus
ENSORLG00000008776	ptcd3	100	72.000	ENSAOCG00000017186	ptcd3	97	72.079	Amphiprion_ocellaris
ENSORLG00000008776	ptcd3	100	72.086	ENSAPEG00000016069	ptcd3	97	71.775	Amphiprion_percula
ENSORLG00000008776	ptcd3	88	47.432	ENSAPLG00000005086	PTCD3	98	46.990	Anas_platyrhynchos
ENSORLG00000008776	ptcd3	100	79.141	ENSACLG00000020653	ptcd3	100	78.195	Astatotilapia_calliptera
ENSORLG00000008776	ptcd3	100	57.427	ENSAMXG00000011570	ptcd3	100	56.372	Astyanax_mexicanus
ENSORLG00000008776	ptcd3	100	76.462	ENSCVAG00000020820	ptcd3	98	77.500	Cyprinodon_variegatus
ENSORLG00000008776	ptcd3	87	71.252	ENSGAFG00000015291	ptcd3	94	70.899	Gambusia_affinis
ENSORLG00000008776	ptcd3	100	79.448	ENSHBUG00000020056	ptcd3	100	78.496	Haplochromis_burtoni
ENSORLG00000008776	ptcd3	100	71.407	ENSLBEG00000015349	ptcd3	99	70.721	Labrus_bergylta
ENSORLG00000008776	ptcd3	100	79.294	ENSMZEG00005004980	ptcd3	100	78.346	Maylandia_zebra
ENSORLG00000008776	ptcd3	92	45.649	ENSMGAG00000013124	PTCD3	99	45.425	Meleagris_gallopavo
ENSORLG00000008776	ptcd3	100	72.477	ENSMALG00000013282	ptcd3	100	71.856	Monopterus_albus
ENSORLG00000008776	ptcd3	92	74.329	ENSNBRG00000000447	ptcd3	100	74.329	Neolamprologus_brichardi
ENSORLG00000008776	ptcd3	100	79.601	ENSONIG00000015886	ptcd3	100	78.496	Oreochromis_niloticus
ENSORLG00000008776	ptcd3	100	98.769	ENSORLG00020020676	ptcd3	100	98.659	Oryzias_latipes_hni
ENSORLG00000008776	ptcd3	88	77.129	ENSORLG00015015978	ptcd3	99	77.295	Oryzias_latipes_hsok
ENSORLG00000008776	ptcd3	100	72.657	ENSPFOG00000004442	ptcd3	100	72.350	Poecilia_formosa
ENSORLG00000008776	ptcd3	92	73.120	ENSPLAG00000021401	ptcd3	100	73.120	Poecilia_latipinna
ENSORLG00000008776	ptcd3	90	70.819	ENSPMEG00000007153	ptcd3	100	70.819	Poecilia_mexicana
ENSORLG00000008776	ptcd3	100	54.858	ENSSFOG00015019643	ptcd3	97	55.825	Scleropages_formosus
ENSORLG00000008776	ptcd3	82	52.118	ENSTGUG00000010760	PTCD3	100	51.577	Taeniopygia_guttata
ENSORLG00000008776	ptcd3	100	63.914	ENSTRUG00000003939	ptcd3	99	63.872	Takifugu_rubripes