EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000008940 (Gene tree)
Gene ID: 101161406
Gene Symbol: ern1
Alias: -
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 14221 bases
Position: chr8:12102224-12116444
Accession: 101161406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000011214	Ribonuc_2-5A	PF06479.12	3.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000011215	-	3216	-	ENSORLP00000011214	1071 (aa)	-	H2LYJ6

Gene Model

Click here to download ENSORLG00000008940's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04140	Autophagy - animal	KEGG
ola04141	Protein processing in endoplasmic reticulum	KEGG
ola04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000008940	ern1	87	54.990	ENSORLG00000008924	ERN2	99	55.144

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008940	ern1	96	87.003	ENSAPOG00000009999	ern1	95	87.003	Acanthochromis_polyacanthus
ENSORLG00000008940	ern1	99	86.038	ENSACIG00000021716	ern1	97	86.119	Amphilophus_citrinellus
ENSORLG00000008940	ern1	99	85.874	ENSAOCG00000012309	ern1	98	85.874	Amphiprion_ocellaris
ENSORLG00000008940	ern1	99	85.502	ENSAPEG00000011263	ern1	98	91.568	Amphiprion_percula
ENSORLG00000008940	ern1	100	85.622	ENSATEG00000024468	ern1	98	85.622	Anabas_testudineus
ENSORLG00000008940	ern1	99	86.207	ENSACLG00000027919	ern1	98	86.207	Astatotilapia_calliptera
ENSORLG00000008940	ern1	98	78.673	ENSAMXG00000000944	ern1	93	83.385	Astyanax_mexicanus
ENSORLG00000008940	ern1	95	85.117	ENSCSEG00000014500	ern1	99	84.893	Cynoglossus_semilaevis
ENSORLG00000008940	ern1	97	85.319	ENSCVAG00000002988	ern1	99	85.496	Cyprinodon_variegatus
ENSORLG00000008940	ern1	90	80.825	ENSDARG00000013997	ern1	100	81.101	Danio_rerio
ENSORLG00000008940	ern1	90	79.897	ENSELUG00000005957	ern1	93	80.103	Esox_lucius
ENSORLG00000008940	ern1	99	83.364	ENSFHEG00000005578	ern1	99	82.870	Fundulus_heteroclitus
ENSORLG00000008940	ern1	87	84.681	ENSGMOG00000011232	ern1	100	84.681	Gadus_morhua
ENSORLG00000008940	ern1	100	84.358	ENSGAFG00000020231	ern1	99	84.358	Gambusia_affinis
ENSORLG00000008940	ern1	89	87.879	ENSGACG00000011700	ern1	99	87.879	Gasterosteus_aculeatus
ENSORLG00000008940	ern1	97	86.628	ENSHBUG00000012581	ern1	97	86.108	Haplochromis_burtoni
ENSORLG00000008940	ern1	95	83.710	ENSHCOG00000016199	ern1	92	87.500	Hippocampus_comes
ENSORLG00000008940	ern1	91	83.077	ENSIPUG00000011083	ern1	94	83.077	Ictalurus_punctatus
ENSORLG00000008940	ern1	100	83.597	ENSKMAG00000019499	ern1	98	83.597	Kryptolebias_marmoratus
ENSORLG00000008940	ern1	98	82.203	ENSLBEG00000025907	ern1	98	82.203	Labrus_bergylta
ENSORLG00000008940	ern1	100	85.130	ENSMAMG00000023439	ern1	98	85.538	Mastacembelus_armatus
ENSORLG00000008940	ern1	99	86.207	ENSMZEG00005003221	ern1	98	86.207	Maylandia_zebra
ENSORLG00000008940	ern1	91	87.487	ENSMMOG00000007650	ern1	97	87.487	Mola_mola
ENSORLG00000008940	ern1	100	83.225	ENSMALG00000017775	ern1	96	83.225	Monopterus_albus
ENSORLG00000008940	ern1	97	86.877	ENSNBRG00000002179	ern1	96	86.877	Neolamprologus_brichardi
ENSORLG00000008940	ern1	89	89.540	ENSONIG00000017169	ern1	99	89.540	Oreochromis_niloticus
ENSORLG00000008940	ern1	100	98.973	ENSORLG00020018387	ern1	100	98.973	Oryzias_latipes_hni
ENSORLG00000008940	ern1	100	98.973	ENSORLG00015007946	ern1	100	98.973	Oryzias_latipes_hsok
ENSORLG00000008940	ern1	100	95.340	ENSOMEG00000011741	ern1	100	95.340	Oryzias_melastigma
ENSORLG00000008940	ern1	89	81.628	ENSPKIG00000005593	ern1	97	81.628	Paramormyrops_kingsleyae
ENSORLG00000008940	ern1	93	86.527	ENSPMGG00000020442	ern1	96	86.432	Periophthalmus_magnuspinnatus
ENSORLG00000008940	ern1	99	84.972	ENSPFOG00000007378	ern1	99	84.118	Poecilia_formosa
ENSORLG00000008940	ern1	100	84.986	ENSPLAG00000014780	ern1	99	84.133	Poecilia_latipinna
ENSORLG00000008940	ern1	100	85.171	ENSPMEG00000016324	ern1	99	84.317	Poecilia_mexicana
ENSORLG00000008940	ern1	100	84.893	ENSPREG00000006286	ern1	99	84.041	Poecilia_reticulata
ENSORLG00000008940	ern1	99	86.300	ENSPNYG00000017929	ern1	98	89.020	Pundamilia_nyererei
ENSORLG00000008940	ern1	93	81.964	ENSPNAG00000029447	ern1	99	79.409	Pygocentrus_nattereri
ENSORLG00000008940	ern1	99	84.201	ENSSMAG00000015042	ern1	98	84.201	Scophthalmus_maximus
ENSORLG00000008940	ern1	100	86.494	ENSSDUG00000009098	ern1	98	86.494	Seriola_dumerili
ENSORLG00000008940	ern1	100	86.216	ENSSLDG00000023254	ern1	98	86.216	Seriola_lalandi_dorsalis
ENSORLG00000008940	ern1	99	85.196	ENSSPAG00000017539	ern1	98	85.196	Stegastes_partitus
ENSORLG00000008940	ern1	92	84.894	ENSTRUG00000001041	ern1	95	84.592	Takifugu_rubripes
ENSORLG00000008940	ern1	87	89.137	ENSTNIG00000017990	ern1	98	89.160	Tetraodon_nigroviridis
ENSORLG00000008940	ern1	91	89.206	ENSXCOG00000010330	ern1	95	89.659	Xiphophorus_couchianus
ENSORLG00000008940	ern1	100	84.308	ENSXMAG00000001310	ern1	99	83.457	Xiphophorus_maculatus