EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000008958 (Gene tree)
Gene ID: 101157164
Gene Symbol: polr3a
Alias: -
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 19993 bases
Position: chr19:10742425-10762417
Accession: 101157164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000011232	RNA_pol_Rpb1_5	PF04998.17	4.3e-88	1	1
ENSORLP00000032459	RNA_pol_Rpb1_5	PF04998.17	4.9e-88	1	1
ENSORLP00000032459	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSORLP00000011232	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSORLP00000011232	RNA_pol_Rpb1_2	PF00623.20	1.7e-73	1	1
ENSORLP00000032459	RNA_pol_Rpb1_2	PF00623.20	1.7e-73	1	1
ENSORLP00000011232	RNA_pol_Rpb1_3	PF04983.18	4.2e-41	1	1
ENSORLP00000032459	RNA_pol_Rpb1_3	PF04983.18	4.3e-41	1	1
ENSORLP00000032459	RNA_pol_Rpb1_1	PF04997.12	1.2e-92	1	1
ENSORLP00000011232	RNA_pol_Rpb1_1	PF04997.12	1.2e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000030341	-	5066	XM_020712012	ENSORLP00000032459	1402 (aa)	XP_020567671	UPI0009DA9E46
ENSORLT00000011233	-	5030	XM_004080410	ENSORLP00000011232	1390 (aa)	XP_004080458	H2LYL3

Gene Model

Click here to download ENSORLG00000008958's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03020	RNA polymerase	KEGG
ola04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000008958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000008958	polr3a	91	38.268	ENSORLG00000006431	polr2a	68	38.268
ENSORLG00000008958	polr3a	88	31.757	ENSORLG00000008753	polr1a	84	31.757

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000008958	polr3a	100	89.928	ENSG00000148606	POLR3A	98	93.038	Homo_sapiens
ENSORLG00000008958	polr3a	62	92.915	ENSAPOG00000022727	polr3a	99	92.915	Acanthochromis_polyacanthus
ENSORLG00000008958	polr3a	100	89.663	ENSAMEG00000017801	POLR3A	100	89.663	Ailuropoda_melanoleuca
ENSORLG00000008958	polr3a	94	96.308	ENSACIG00000024504	polr3a	97	96.308	Amphilophus_citrinellus
ENSORLG00000008958	polr3a	100	92.734	ENSAOCG00000003949	-	100	92.734	Amphiprion_ocellaris
ENSORLG00000008958	polr3a	100	96.115	ENSAOCG00000002071	polr3a	100	96.115	Amphiprion_ocellaris
ENSORLG00000008958	polr3a	100	96.115	ENSAPEG00000013351	polr3a	100	96.115	Amphiprion_percula
ENSORLG00000008958	polr3a	100	95.899	ENSAPEG00000001966	-	100	95.899	Amphiprion_percula
ENSORLG00000008958	polr3a	100	95.971	ENSATEG00000023277	polr3a	100	95.971	Anabas_testudineus
ENSORLG00000008958	polr3a	99	90.545	ENSAPLG00000015878	POLR3A	99	90.545	Anas_platyrhynchos
ENSORLG00000008958	polr3a	93	89.534	ENSACAG00000007985	POLR3A	99	89.534	Anolis_carolinensis
ENSORLG00000008958	polr3a	100	87.222	ENSANAG00000028922	POLR3A	96	93.631	Aotus_nancymaae
ENSORLG00000008958	polr3a	100	95.683	ENSACLG00000005914	polr3a	100	95.683	Astatotilapia_calliptera
ENSORLG00000008958	polr3a	99	88.977	ENSAMXG00000018852	polr3a	99	88.977	Astyanax_mexicanus
ENSORLG00000008958	polr3a	100	89.928	ENSBTAG00000013259	POLR3A	100	89.928	Bos_taurus
ENSORLG00000008958	polr3a	98	56.743	WBGene00004411	rpc-1	99	56.743	Caenorhabditis_elegans
ENSORLG00000008958	polr3a	100	89.784	ENSCJAG00000001015	POLR3A	100	89.784	Callithrix_jacchus
ENSORLG00000008958	polr3a	100	89.856	ENSCAFG00000015546	POLR3A	100	89.856	Canis_familiaris
ENSORLG00000008958	polr3a	100	89.856	ENSCAFG00020014711	POLR3A	100	89.856	Canis_lupus_dingo
ENSORLG00000008958	polr3a	100	89.712	ENSCHIG00000000352	POLR3A	100	89.712	Capra_hircus
ENSORLG00000008958	polr3a	100	89.424	ENSTSYG00000006671	POLR3A	100	89.424	Carlito_syrichta
ENSORLG00000008958	polr3a	99	89.818	ENSCAPG00000016031	POLR3A	100	89.818	Cavia_aperea
ENSORLG00000008958	polr3a	100	89.856	ENSCPOG00000022387	POLR3A	100	89.856	Cavia_porcellus
ENSORLG00000008958	polr3a	100	88.489	ENSCCAG00000032995	POLR3A	96	93.038	Cebus_capucinus
ENSORLG00000008958	polr3a	100	89.928	ENSCATG00000035842	POLR3A	98	93.038	Cercocebus_atys
ENSORLG00000008958	polr3a	100	89.568	ENSCLAG00000009629	POLR3A	100	89.568	Chinchilla_lanigera
ENSORLG00000008958	polr3a	100	89.928	ENSCSAG00000009292	POLR3A	100	89.928	Chlorocebus_sabaeus
ENSORLG00000008958	polr3a	81	81.818	ENSCHOG00000008368	POLR3A	95	81.818	Choloepus_hoffmanni
ENSORLG00000008958	polr3a	99	90.065	ENSCPBG00000002079	POLR3A	99	90.065	Chrysemys_picta_bellii
ENSORLG00000008958	polr3a	99	68.804	ENSCSAVG00000009925	-	99	68.804	Ciona_savignyi
ENSORLG00000008958	polr3a	86	85.528	ENSCANG00000041071	POLR3A	98	92.405	Colobus_angolensis_palliatus
ENSORLG00000008958	polr3a	78	90.527	ENSCGRG00001015599	-	92	90.527	Cricetulus_griseus_chok1gshd
ENSORLG00000008958	polr3a	88	88.954	ENSCGRG00000001019	Polr3a	100	88.954	Cricetulus_griseus_crigri
ENSORLG00000008958	polr3a	100	95.540	ENSCSEG00000016653	polr3a	100	95.540	Cynoglossus_semilaevis
ENSORLG00000008958	polr3a	100	95.396	ENSCVAG00000023049	polr3a	100	95.396	Cyprinodon_variegatus
ENSORLG00000008958	polr3a	99	91.643	ENSDARG00000102569	polr3a	99	91.643	Danio_rerio
ENSORLG00000008958	polr3a	100	89.065	ENSDNOG00000010194	POLR3A	100	89.065	Dasypus_novemcinctus
ENSORLG00000008958	polr3a	100	89.856	ENSDORG00000000184	Polr3a	100	89.856	Dipodomys_ordii
ENSORLG00000008958	polr3a	99	56.512	FBgn0030687	CG17209	99	56.512	Drosophila_melanogaster
ENSORLG00000008958	polr3a	88	89.879	ENSETEG00000007477	POLR3A	89	89.879	Echinops_telfairi
ENSORLG00000008958	polr3a	59	76.464	ENSEBUG00000013761	polr3a	98	76.464	Eptatretus_burgeri
ENSORLG00000008958	polr3a	100	89.856	ENSEASG00005023053	POLR3A	100	89.856	Equus_asinus_asinus
ENSORLG00000008958	polr3a	97	90.015	ENSECAG00000019416	POLR3A	100	89.642	Equus_caballus
ENSORLG00000008958	polr3a	97	84.701	ENSEEUG00000001774	POLR3A	100	85.459	Erinaceus_europaeus
ENSORLG00000008958	polr3a	100	90.883	ENSELUG00000014016	polr3a	100	90.883	Esox_lucius
ENSORLG00000008958	polr3a	100	90.000	ENSFCAG00000000843	POLR3A	100	90.000	Felis_catus
ENSORLG00000008958	polr3a	100	90.223	ENSFALG00000006913	POLR3A	100	90.223	Ficedula_albicollis
ENSORLG00000008958	polr3a	100	90.000	ENSFDAG00000007813	POLR3A	100	90.000	Fukomys_damarensis
ENSORLG00000008958	polr3a	95	95.789	ENSFHEG00000011922	polr3a	99	95.789	Fundulus_heteroclitus
ENSORLG00000008958	polr3a	100	87.825	ENSGMOG00000000291	polr3a	99	87.825	Gadus_morhua
ENSORLG00000008958	polr3a	100	90.576	ENSGALG00000004947	POLR3A	100	90.576	Gallus_gallus
ENSORLG00000008958	polr3a	100	95.252	ENSGAFG00000005112	polr3a	100	95.252	Gambusia_affinis
ENSORLG00000008958	polr3a	100	93.885	ENSGACG00000002304	polr3a	100	93.885	Gasterosteus_aculeatus
ENSORLG00000008958	polr3a	95	89.856	ENSGAGG00000010386	POLR3A	98	89.856	Gopherus_agassizii
ENSORLG00000008958	polr3a	99	88.873	ENSGGOG00000027729	POLR3A	98	93.038	Gorilla_gorilla
ENSORLG00000008958	polr3a	100	95.683	ENSHBUG00000018098	polr3a	100	95.683	Haplochromis_burtoni
ENSORLG00000008958	polr3a	100	90.144	ENSHGLG00000017899	POLR3A	100	90.144	Heterocephalus_glaber_female
ENSORLG00000008958	polr3a	100	90.144	ENSHGLG00100008483	POLR3A	100	90.144	Heterocephalus_glaber_male
ENSORLG00000008958	polr3a	100	94.604	ENSHCOG00000001075	polr3a	100	94.604	Hippocampus_comes
ENSORLG00000008958	polr3a	100	89.928	ENSSTOG00000012983	POLR3A	100	89.928	Ictidomys_tridecemlineatus
ENSORLG00000008958	polr3a	100	95.221	ENSKMAG00000015290	polr3a	100	95.221	Kryptolebias_marmoratus
ENSORLG00000008958	polr3a	99	94.312	ENSLBEG00000017214	polr3a	99	94.312	Labrus_bergylta
ENSORLG00000008958	polr3a	97	87.658	ENSLACG00000018557	POLR3A	99	87.658	Latimeria_chalumnae
ENSORLG00000008958	polr3a	100	92.032	ENSLOCG00000004942	polr3a	100	92.032	Lepisosteus_oculatus
ENSORLG00000008958	polr3a	100	88.641	ENSLAFG00000016719	POLR3A	100	88.641	Loxodonta_africana
ENSORLG00000008958	polr3a	100	89.856	ENSMFAG00000032218	POLR3A	100	89.856	Macaca_fascicularis
ENSORLG00000008958	polr3a	100	89.856	ENSMMUG00000005514	POLR3A	98	93.038	Macaca_mulatta
ENSORLG00000008958	polr3a	99	83.345	ENSMNEG00000035163	POLR3A	99	89.413	Macaca_nemestrina
ENSORLG00000008958	polr3a	100	86.115	ENSMLEG00000030014	POLR3A	98	93.038	Mandrillus_leucophaeus
ENSORLG00000008958	polr3a	100	95.180	ENSMAMG00000017497	polr3a	100	95.180	Mastacembelus_armatus
ENSORLG00000008958	polr3a	100	95.683	ENSMZEG00005000576	polr3a	100	95.683	Maylandia_zebra
ENSORLG00000008958	polr3a	100	73.159	ENSMGAG00000005713	-	100	73.159	Meleagris_gallopavo
ENSORLG00000008958	polr3a	100	87.842	ENSMAUG00000016247	Polr3a	100	87.842	Mesocricetus_auratus
ENSORLG00000008958	polr3a	100	89.928	ENSMICG00000005937	POLR3A	100	90.964	Microcebus_murinus
ENSORLG00000008958	polr3a	100	89.928	ENSMOCG00000012185	Polr3a	100	89.928	Microtus_ochrogaster
ENSORLG00000008958	polr3a	100	94.676	ENSMMOG00000013822	polr3a	100	94.676	Mola_mola
ENSORLG00000008958	polr3a	100	89.712	ENSMODG00000001036	POLR3A	100	89.712	Monodelphis_domestica
ENSORLG00000008958	polr3a	100	95.324	ENSMALG00000001249	polr3a	100	95.324	Monopterus_albus
ENSORLG00000008958	polr3a	100	90.000	MGP_CAROLIEiJ_G0019016	Polr3a	100	90.000	Mus_caroli
ENSORLG00000008958	polr3a	100	90.000	ENSMUSG00000025280	Polr3a	100	90.000	Mus_musculus
ENSORLG00000008958	polr3a	100	89.928	MGP_PahariEiJ_G0030029	Polr3a	100	89.928	Mus_pahari
ENSORLG00000008958	polr3a	100	87.410	MGP_SPRETEiJ_G0019894	Polr3a	97	97.000	Mus_spretus
ENSORLG00000008958	polr3a	100	89.800	ENSMPUG00000003790	POLR3A	100	89.800	Mustela_putorius_furo
ENSORLG00000008958	polr3a	100	88.849	ENSMLUG00000011522	POLR3A	100	88.849	Myotis_lucifugus
ENSORLG00000008958	polr3a	100	88.561	ENSNGAG00000015863	Polr3a	100	88.561	Nannospalax_galili
ENSORLG00000008958	polr3a	100	93.813	ENSNBRG00000014262	polr3a	100	93.813	Neolamprologus_brichardi
ENSORLG00000008958	polr3a	88	83.417	ENSNLEG00000010501	POLR3A	92	83.417	Nomascus_leucogenys
ENSORLG00000008958	polr3a	99	77.309	ENSMEUG00000012446	POLR3A	100	77.309	Notamacropus_eugenii
ENSORLG00000008958	polr3a	100	85.396	ENSOPRG00000001880	-	100	85.396	Ochotona_princeps
ENSORLG00000008958	polr3a	100	89.281	ENSODEG00000015146	POLR3A	100	89.281	Octodon_degus
ENSORLG00000008958	polr3a	100	95.971	ENSONIG00000016129	polr3a	100	95.971	Oreochromis_niloticus
ENSORLG00000008958	polr3a	99	88.631	ENSOANG00000007013	POLR3A	100	89.408	Ornithorhynchus_anatinus
ENSORLG00000008958	polr3a	100	89.712	ENSOCUG00000012450	POLR3A	100	89.712	Oryctolagus_cuniculus
ENSORLG00000008958	polr3a	100	97.482	ENSORLG00020007525	polr3a	98	99.852	Oryzias_latipes_hni
ENSORLG00000008958	polr3a	100	99.857	ENSORLG00015006633	polr3a	100	99.857	Oryzias_latipes_hsok
ENSORLG00000008958	polr3a	100	97.482	ENSOMEG00000012865	polr3a	100	97.482	Oryzias_melastigma
ENSORLG00000008958	polr3a	100	89.712	ENSOGAG00000010995	POLR3A	100	89.712	Otolemur_garnettii
ENSORLG00000008958	polr3a	100	89.583	ENSOARG00000009656	POLR3A	100	89.583	Ovis_aries
ENSORLG00000008958	polr3a	100	90.000	ENSPPRG00000002128	POLR3A	100	90.000	Panthera_pardus
ENSORLG00000008958	polr3a	100	90.000	ENSPTIG00000020916	POLR3A	100	90.000	Panthera_tigris_altaica
ENSORLG00000008958	polr3a	100	90.000	ENSPTRG00000002664	POLR3A	98	93.038	Pan_troglodytes
ENSORLG00000008958	polr3a	100	89.856	ENSPANG00000022508	POLR3A	98	93.038	Papio_anubis
ENSORLG00000008958	polr3a	100	92.230	ENSPKIG00000008140	polr3a	100	92.443	Paramormyrops_kingsleyae
ENSORLG00000008958	polr3a	99	89.138	ENSPSIG00000002092	POLR3A	100	89.920	Pelodiscus_sinensis
ENSORLG00000008958	polr3a	100	89.640	ENSPEMG00000006768	Polr3a	100	89.640	Peromyscus_maniculatus_bairdii
ENSORLG00000008958	polr3a	100	89.640	ENSPCIG00000015842	POLR3A	100	89.640	Phascolarctos_cinereus
ENSORLG00000008958	polr3a	54	97.315	ENSPFOG00000006458	polr3a	100	97.315	Poecilia_formosa
ENSORLG00000008958	polr3a	100	95.827	ENSPLAG00000000997	polr3a	100	95.827	Poecilia_latipinna
ENSORLG00000008958	polr3a	100	95.755	ENSPMEG00000006821	polr3a	100	95.755	Poecilia_mexicana
ENSORLG00000008958	polr3a	100	95.612	ENSPREG00000002385	polr3a	100	95.612	Poecilia_reticulata
ENSORLG00000008958	polr3a	93	89.775	ENSPPYG00000002305	POLR3A	99	89.775	Pongo_abelii
ENSORLG00000008958	polr3a	85	78.435	ENSPCAG00000005690	POLR3A	87	78.435	Procavia_capensis
ENSORLG00000008958	polr3a	100	89.784	ENSPCOG00000028311	POLR3A	100	89.784	Propithecus_coquereli
ENSORLG00000008958	polr3a	100	88.417	ENSPVAG00000015553	POLR3A	100	88.417	Pteropus_vampyrus
ENSORLG00000008958	polr3a	100	95.612	ENSPNYG00000020987	polr3a	100	95.612	Pundamilia_nyererei
ENSORLG00000008958	polr3a	99	88.184	ENSPNAG00000006629	polr3a	99	88.184	Pygocentrus_nattereri
ENSORLG00000008958	polr3a	100	89.856	ENSRNOG00000010008	Polr3a	100	89.856	Rattus_norvegicus
ENSORLG00000008958	polr3a	100	86.187	ENSRBIG00000034967	POLR3A	98	93.038	Rhinopithecus_bieti
ENSORLG00000008958	polr3a	100	89.712	ENSRROG00000025527	POLR3A	98	93.038	Rhinopithecus_roxellana
ENSORLG00000008958	polr3a	98	49.620	YOR116C	RPO31	98	49.620	Saccharomyces_cerevisiae
ENSORLG00000008958	polr3a	100	89.856	ENSSBOG00000022199	POLR3A	100	89.856	Saimiri_boliviensis_boliviensis
ENSORLG00000008958	polr3a	100	89.568	ENSSHAG00000007588	POLR3A	94	89.568	Sarcophilus_harrisii
ENSORLG00000008958	polr3a	100	93.022	ENSSFOG00015014357	polr3a	100	93.022	Scleropages_formosus
ENSORLG00000008958	polr3a	100	95.036	ENSSMAG00000001780	polr3a	100	95.036	Scophthalmus_maximus
ENSORLG00000008958	polr3a	100	95.899	ENSSDUG00000019840	polr3a	100	95.899	Seriola_dumerili
ENSORLG00000008958	polr3a	100	95.899	ENSSLDG00000023908	polr3a	100	95.899	Seriola_lalandi_dorsalis
ENSORLG00000008958	polr3a	69	89.969	ENSSARG00000009916	POLR3A	89	89.969	Sorex_araneus
ENSORLG00000008958	polr3a	100	88.058	ENSSPUG00000013209	POLR3A	100	88.058	Sphenodon_punctatus
ENSORLG00000008958	polr3a	100	96.115	ENSSPAG00000017712	polr3a	100	96.115	Stegastes_partitus
ENSORLG00000008958	polr3a	100	89.784	ENSSSCG00000010327	POLR3A	100	89.784	Sus_scrofa
ENSORLG00000008958	polr3a	100	90.360	ENSTGUG00000006423	-	100	90.360	Taeniopygia_guttata
ENSORLG00000008958	polr3a	100	94.604	ENSTRUG00000013488	polr3a	100	94.604	Takifugu_rubripes
ENSORLG00000008958	polr3a	100	94.971	ENSTNIG00000013151	polr3a	100	94.971	Tetraodon_nigroviridis
ENSORLG00000008958	polr3a	71	91.489	ENSTBEG00000015288	POLR3A	75	91.489	Tupaia_belangeri
ENSORLG00000008958	polr3a	100	83.885	ENSTTRG00000007817	POLR3A	100	83.885	Tursiops_truncatus
ENSORLG00000008958	polr3a	100	87.554	ENSUAMG00000011283	POLR3A	100	87.554	Ursus_americanus
ENSORLG00000008958	polr3a	100	89.856	ENSUMAG00000013913	POLR3A	100	89.856	Ursus_maritimus
ENSORLG00000008958	polr3a	99	81.745	ENSVPAG00000003285	POLR3A	100	81.745	Vicugna_pacos
ENSORLG00000008958	polr3a	100	89.856	ENSVVUG00000025523	POLR3A	100	89.856	Vulpes_vulpes
ENSORLG00000008958	polr3a	86	90.142	ENSXETG00000018101	polr3a	100	90.142	Xenopus_tropicalis
ENSORLG00000008958	polr3a	100	95.612	ENSXMAG00000015213	polr3a	100	95.612	Xiphophorus_maculatus