EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000009132 (Gene tree)
Gene ID: 101158641
Gene Symbol: -
Alias: -
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6369 bases
Position: chr19:10939566-10945934
Accession: 101158641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000028932	MMR_HSR1	PF01926.23	2.9e-05	1	1
ENSORLP00000034703	MMR_HSR1	PF01926.23	3.7e-05	1	1
ENSORLP00000011456	MMR_HSR1	PF01926.23	4.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000032693	-	2347	-	ENSORLP00000034703	246 (aa)	-	-
ENSORLT00000030237	-	2269	XM_004080416	ENSORLP00000028932	220 (aa)	XP_004080464	-
ENSORLT00000011457	-	423	-	ENSORLP00000011456	140 (aa)	-	H2LZ84

Gene Model

Click here to download ENSORLG00000009132's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009132's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000009132	-	68	36.842	ENSORLG00000006350	arl13b	52	36.641
ENSORLG00000009132	-	74	34.286	ENSORLG00000029190	arf2b	76	30.539
ENSORLG00000009132	-	82	30.387	ENSORLG00000023270	-	94	30.387
ENSORLG00000009132	-	67	31.915	ENSORLG00000009664	arl5a	53	31.915
ENSORLG00000009132	-	80	30.682	ENSORLG00000008909	arl1	97	30.682
ENSORLG00000009132	-	65	37.500	ENSORLG00000029448	arl4aa	70	34.074
ENSORLG00000009132	-	90	85.859	ENSORLG00000000932	sar1b	100	85.859
ENSORLG00000009132	-	79	32.727	ENSORLG00000025025	arf3b	78	32.394
ENSORLG00000009132	-	69	34.682	ENSORLG00000018307	-	83	34.682
ENSORLG00000009132	-	79	35.135	ENSORLG00000005005	arl3l2	87	34.356
ENSORLG00000009132	-	66	31.000	ENSORLG00000010647	arfrp1	70	32.624
ENSORLG00000009132	-	74	35.185	ENSORLG00000027330	arl14	68	34.400
ENSORLG00000009132	-	58	34.375	ENSORLG00000012782	arl8bb	68	34.646
ENSORLG00000009132	-	64	34.831	ENSORLG00000010847	arl8	72	31.008
ENSORLG00000009132	-	51	33.858	ENSORLG00000028909	arl8a	68	33.858
ENSORLG00000009132	-	79	32.727	ENSORLG00000007661	-	78	32.394
ENSORLG00000009132	-	63	37.234	ENSORLG00000026726	-	70	33.835
ENSORLG00000009132	-	66	31.183	ENSORLG00000010952	arl3	64	35.135
ENSORLG00000009132	-	90	81.818	ENSORLG00000006779	sar1ab	67	81.818
ENSORLG00000009132	-	73	33.654	ENSORLG00000015588	-	68	33.099
ENSORLG00000009132	-	67	30.851	ENSORLG00000002960	arl5c	57	30.851
ENSORLG00000009132	-	69	32.653	ENSORLG00000018486	arl11	72	35.000
ENSORLG00000009132	-	71	31.731	ENSORLG00000007235	-	69	33.846
ENSORLG00000009132	-	83	32.240	ENSORLG00000005571	arl2	93	32.240
ENSORLG00000009132	-	87	34.646	ENSORLG00000013843	arl4cb	74	33.784
ENSORLG00000009132	-	85	31.053	ENSORLG00000005063	ARL6	96	31.053
ENSORLG00000009132	-	58	34.375	ENSORLG00000027941	arl8ba	69	34.375
ENSORLG00000009132	-	82	30.978	ENSORLG00000017594	-	98	30.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009132	-	90	80.303	ENSACIG00000019827	sar1ab	100	80.303	Amphilophus_citrinellus
ENSORLG00000009132	-	90	80.808	ENSAOCG00000022062	sar1ab	100	80.808	Amphiprion_ocellaris
ENSORLG00000009132	-	90	80.808	ENSAPEG00000011525	sar1ab	100	80.808	Amphiprion_percula
ENSORLG00000009132	-	90	83.838	ENSATEG00000003466	sar1ab	100	83.838	Anabas_testudineus
ENSORLG00000009132	-	90	78.283	ENSACLG00000013053	sar1ab	100	78.283	Astatotilapia_calliptera
ENSORLG00000009132	-	90	82.323	ENSCSEG00000004825	sar1ab	100	82.323	Cynoglossus_semilaevis
ENSORLG00000009132	-	90	80.808	ENSCVAG00000015162	sar1ab	100	80.808	Cyprinodon_variegatus
ENSORLG00000009132	-	90	88.384	ENSCVAG00000006500	-	100	88.384	Cyprinodon_variegatus
ENSORLG00000009132	-	90	83.838	ENSDARG00000033320	sar1ab	100	83.838	Danio_rerio
ENSORLG00000009132	-	90	90.909	ENSELUG00000013652	sar1a	100	90.909	Esox_lucius
ENSORLG00000009132	-	90	82.828	ENSELUG00000024279	sar1ab	100	82.828	Esox_lucius
ENSORLG00000009132	-	100	72.646	ENSFHEG00000021773	sar1ab	100	79.798	Fundulus_heteroclitus
ENSORLG00000009132	-	90	88.889	ENSFHEG00000012352	-	100	88.889	Fundulus_heteroclitus
ENSORLG00000009132	-	90	79.798	ENSGMOG00000012588	sar1ab	100	79.798	Gadus_morhua
ENSORLG00000009132	-	90	80.303	ENSGAFG00000009702	sar1ab	100	80.303	Gambusia_affinis
ENSORLG00000009132	-	90	89.394	ENSGAFG00000004846	-	100	89.394	Gambusia_affinis
ENSORLG00000009132	-	90	83.838	ENSGACG00000008616	sar1ab	100	83.838	Gasterosteus_aculeatus
ENSORLG00000009132	-	90	78.788	ENSHBUG00000021221	sar1ab	100	78.788	Haplochromis_burtoni
ENSORLG00000009132	-	99	75.688	ENSHCOG00000002845	sar1ab	88	75.688	Hippocampus_comes
ENSORLG00000009132	-	90	80.303	ENSKMAG00000018006	sar1ab	100	80.303	Kryptolebias_marmoratus
ENSORLG00000009132	-	90	83.333	ENSLBEG00000001114	sar1ab	100	83.333	Labrus_bergylta
ENSORLG00000009132	-	90	83.333	ENSMAMG00000021314	sar1ab	100	83.333	Mastacembelus_armatus
ENSORLG00000009132	-	90	78.283	ENSMZEG00005027606	sar1ab	100	78.283	Maylandia_zebra
ENSORLG00000009132	-	90	83.333	ENSMMOG00000010360	sar1ab	100	83.333	Mola_mola
ENSORLG00000009132	-	90	83.333	ENSMALG00000005831	sar1ab	100	83.333	Monopterus_albus
ENSORLG00000009132	-	90	78.788	ENSNBRG00000018772	sar1ab	100	78.788	Neolamprologus_brichardi
ENSORLG00000009132	-	90	79.798	ENSONIG00000018509	sar1ab	100	79.798	Oreochromis_niloticus
ENSORLG00000009132	-	90	82.323	ENSORLG00020005458	sar1ab	100	82.323	Oryzias_latipes_hni
ENSORLG00000009132	-	100	99.545	ENSORLG00020007024	-	100	99.545	Oryzias_latipes_hni
ENSORLG00000009132	-	100	99.545	ENSORLG00015006223	-	100	99.545	Oryzias_latipes_hsok
ENSORLG00000009132	-	90	81.818	ENSORLG00015010542	sar1ab	100	81.818	Oryzias_latipes_hsok
ENSORLG00000009132	-	90	81.818	ENSOMEG00000004948	sar1ab	100	81.818	Oryzias_melastigma
ENSORLG00000009132	-	96	98.113	ENSOMEG00000012020	-	100	99.495	Oryzias_melastigma
ENSORLG00000009132	-	90	87.302	ENSPKIG00000007615	sar1ab	100	84.848	Paramormyrops_kingsleyae
ENSORLG00000009132	-	90	84.343	ENSPMGG00000013330	sar1ab	100	84.343	Periophthalmus_magnuspinnatus
ENSORLG00000009132	-	90	81.313	ENSPFOG00000023432	sar1ab	100	81.313	Poecilia_formosa
ENSORLG00000009132	-	90	81.313	ENSPLAG00000023705	sar1ab	100	81.313	Poecilia_latipinna
ENSORLG00000009132	-	90	88.384	ENSPMEG00000001717	-	100	88.384	Poecilia_mexicana
ENSORLG00000009132	-	90	81.313	ENSPMEG00000000559	sar1ab	100	81.313	Poecilia_mexicana
ENSORLG00000009132	-	90	81.313	ENSPREG00000016098	sar1ab	100	81.313	Poecilia_reticulata
ENSORLG00000009132	-	90	78.788	ENSPNYG00000011603	sar1ab	100	78.788	Pundamilia_nyererei
ENSORLG00000009132	-	90	83.333	ENSPNAG00000008007	sar1ab	100	83.333	Pygocentrus_nattereri
ENSORLG00000009132	-	90	88.889	ENSSFOG00015014010	sar1a	100	88.889	Scleropages_formosus
ENSORLG00000009132	-	79	89.189	ENSSMAG00000020758	sar1ab	80	89.189	Scophthalmus_maximus
ENSORLG00000009132	-	90	82.828	ENSSDUG00000010773	sar1ab	100	82.828	Seriola_dumerili
ENSORLG00000009132	-	90	82.828	ENSSLDG00000025558	sar1ab	100	82.828	Seriola_lalandi_dorsalis
ENSORLG00000009132	-	90	81.818	ENSSPAG00000009194	sar1ab	100	81.818	Stegastes_partitus
ENSORLG00000009132	-	90	80.808	ENSTRUG00000007269	sar1ab	100	80.808	Takifugu_rubripes
ENSORLG00000009132	-	90	80.808	ENSTNIG00000008635	sar1ab	100	80.808	Tetraodon_nigroviridis
ENSORLG00000009132	-	90	80.808	ENSXMAG00000003130	sar1ab	100	80.808	Xiphophorus_maculatus
ENSORLG00000009132	-	90	89.394	ENSXMAG00000026223	SAR1A	100	89.394	Xiphophorus_maculatus