EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000009135 (Gene tree)
Gene ID: 101157145
Gene Symbol: farsb
Alias: -
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 13808 bases
Position: chr13:18565245-18579052
Accession: 101157145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000011462	B3_4	PF03483.17	2.1e-26	1	1
ENSORLP00000032199	B3_4	PF03483.17	2.3e-26	1	1
ENSORLP00000011355	B3_4	PF03483.17	2.8e-26	1	1
ENSORLP00000011464	B3_4	PF03483.17	5.3e-25	1	1
ENSORLP00000011464	B5	PF03484.15	1.6e-15	1	1
ENSORLP00000011462	B5	PF03484.15	2.3e-15	1	1
ENSORLP00000032199	B5	PF03484.15	2.7e-15	1	1
ENSORLP00000011355	B5	PF03484.15	4.6e-15	1	1
ENSORLP00000011355	EF1_GNE	PF00736.19	7.2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000011465	-	1734	-	ENSORLP00000011464	577 (aa)	-	H2LZ92
ENSORLT00000042275	-	3267	-	ENSORLP00000032199	683 (aa)	-	-
ENSORLT00000011463	-	3088	-	ENSORLP00000011462	648 (aa)	-	H2LZ90
ENSORLT00000011356	-	3364	XM_004075467	ENSORLP00000011355	846 (aa)	XP_004075515	H2LYY4

Gene Model

Click here to download ENSORLG00000009135's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009135	farsb	100	73.051	ENSG00000116120	FARSB	100	75.424	Homo_sapiens
ENSORLG00000009135	farsb	100	88.726	ENSAPOG00000013072	farsb	100	88.090	Acanthochromis_polyacanthus
ENSORLG00000009135	farsb	100	72.881	ENSAMEG00000005984	FARSB	100	75.424	Ailuropoda_melanoleuca
ENSORLG00000009135	farsb	100	87.175	ENSACIG00000021623	farsb	100	87.267	Amphilophus_citrinellus
ENSORLG00000009135	farsb	100	87.848	ENSAOCG00000004912	farsb	100	87.146	Amphiprion_ocellaris
ENSORLG00000009135	farsb	100	87.994	ENSAPEG00000001153	farsb	100	87.382	Amphiprion_percula
ENSORLG00000009135	farsb	100	88.115	ENSATEG00000021441	farsb	100	87.116	Anabas_testudineus
ENSORLG00000009135	farsb	99	73.413	ENSAPLG00000010292	FARSB	99	75.986	Anas_platyrhynchos
ENSORLG00000009135	farsb	100	75.042	ENSACAG00000004769	FARSB	98	77.250	Anolis_carolinensis
ENSORLG00000009135	farsb	100	72.373	ENSANAG00000024637	FARSB	100	74.746	Aotus_nancymaae
ENSORLG00000009135	farsb	100	89.304	ENSACLG00000013951	farsb	100	89.204	Astatotilapia_calliptera
ENSORLG00000009135	farsb	84	78.357	ENSAMXG00000033881	farsb	100	81.363	Astyanax_mexicanus
ENSORLG00000009135	farsb	100	73.729	ENSBTAG00000011649	FARSB	100	76.102	Bos_taurus
ENSORLG00000009135	farsb	96	72.743	ENSBTAG00000045523	-	100	75.221	Bos_taurus
ENSORLG00000009135	farsb	100	56.661	WBGene00001498	fars-3	100	58.853	Caenorhabditis_elegans
ENSORLG00000009135	farsb	100	73.051	ENSCJAG00000012181	FARSB	100	75.424	Callithrix_jacchus
ENSORLG00000009135	farsb	100	74.068	ENSCAFG00000016094	-	100	76.271	Canis_familiaris
ENSORLG00000009135	farsb	100	71.235	ENSCAFG00020026684	FARSB	100	75.887	Canis_lupus_dingo
ENSORLG00000009135	farsb	100	74.068	ENSCHIG00000014275	FARSB	100	76.610	Capra_hircus
ENSORLG00000009135	farsb	100	73.051	ENSTSYG00000008461	FARSB	100	75.085	Carlito_syrichta
ENSORLG00000009135	farsb	95	69.352	ENSCAPG00000016436	FARSB	98	70.504	Cavia_aperea
ENSORLG00000009135	farsb	100	72.881	ENSCPOG00000013109	FARSB	100	75.254	Cavia_porcellus
ENSORLG00000009135	farsb	100	68.814	ENSCCAG00000025840	FARSB	100	71.186	Cebus_capucinus
ENSORLG00000009135	farsb	100	73.051	ENSCATG00000036168	FARSB	100	75.424	Cercocebus_atys
ENSORLG00000009135	farsb	100	73.390	ENSCLAG00000011954	FARSB	100	75.593	Chinchilla_lanigera
ENSORLG00000009135	farsb	100	73.051	ENSCSAG00000007806	FARSB	100	75.424	Chlorocebus_sabaeus
ENSORLG00000009135	farsb	80	86.364	ENSCHOG00000011785	FARSB	81	86.364	Choloepus_hoffmanni
ENSORLG00000009135	farsb	100	76.231	ENSCPBG00000019346	FARSB	98	78.608	Chrysemys_picta_bellii
ENSORLG00000009135	farsb	99	59.699	ENSCING00000004180	-	99	61.371	Ciona_intestinalis
ENSORLG00000009135	farsb	99	60.033	ENSCSAVG00000005346	-	99	61.873	Ciona_savignyi
ENSORLG00000009135	farsb	97	72.807	ENSCANG00000036239	FARSB	100	75.263	Colobus_angolensis_palliatus
ENSORLG00000009135	farsb	100	73.729	ENSCGRG00001022928	Farsb	100	76.102	Cricetulus_griseus_chok1gshd
ENSORLG00000009135	farsb	100	73.729	ENSCGRG00000001513	Farsb	100	76.102	Cricetulus_griseus_crigri
ENSORLG00000009135	farsb	100	87.946	ENSCSEG00000005415	farsb	99	89.869	Cynoglossus_semilaevis
ENSORLG00000009135	farsb	76	83.778	ENSCVAG00000018815	farsb	98	87.111	Cyprinodon_variegatus
ENSORLG00000009135	farsb	100	81.525	ENSDARG00000016864	farsb	100	83.898	Danio_rerio
ENSORLG00000009135	farsb	100	71.864	ENSDNOG00000002511	FARSB	100	74.237	Dasypus_novemcinctus
ENSORLG00000009135	farsb	100	72.712	ENSDORG00000011102	Farsb	100	75.085	Dipodomys_ordii
ENSORLG00000009135	farsb	100	60.034	FBgn0039175	beta-PheRS	100	61.720	Drosophila_melanogaster
ENSORLG00000009135	farsb	97	70.702	ENSETEG00000015080	FARSB	100	73.333	Echinops_telfairi
ENSORLG00000009135	farsb	100	63.390	ENSEBUG00000006846	farsb	100	65.763	Eptatretus_burgeri
ENSORLG00000009135	farsb	100	73.220	ENSEASG00005011297	FARSB	100	75.593	Equus_asinus_asinus
ENSORLG00000009135	farsb	100	70.704	ENSECAG00000023086	FARSB	99	75.780	Equus_caballus
ENSORLG00000009135	farsb	100	57.627	ENSEEUG00000007441	FARSB	100	60.169	Erinaceus_europaeus
ENSORLG00000009135	farsb	97	83.888	ENSELUG00000014767	farsb	99	86.515	Esox_lucius
ENSORLG00000009135	farsb	100	73.898	ENSFCAG00000026772	FARSB	100	76.271	Felis_catus
ENSORLG00000009135	farsb	98	72.964	ENSFALG00000006739	FARSB	96	76.626	Ficedula_albicollis
ENSORLG00000009135	farsb	100	73.390	ENSFDAG00000008871	FARSB	100	75.593	Fukomys_damarensis
ENSORLG00000009135	farsb	100	89.134	ENSFHEG00000020939	farsb	98	91.667	Fundulus_heteroclitus
ENSORLG00000009135	farsb	91	81.447	ENSGMOG00000013047	farsb	99	84.416	Gadus_morhua
ENSORLG00000009135	farsb	100	74.873	ENSGALG00000005236	FARSB	100	77.250	Gallus_gallus
ENSORLG00000009135	farsb	100	86.757	ENSGAFG00000020900	farsb	100	85.242	Gambusia_affinis
ENSORLG00000009135	farsb	91	86.271	ENSGACG00000000261	farsb	99	89.239	Gasterosteus_aculeatus
ENSORLG00000009135	farsb	100	76.570	ENSGAGG00000016575	FARSB	98	78.947	Gopherus_agassizii
ENSORLG00000009135	farsb	100	89.474	ENSHBUG00000022379	farsb	100	88.625	Haplochromis_burtoni
ENSORLG00000009135	farsb	100	73.390	ENSHGLG00000015965	FARSB	100	75.593	Heterocephalus_glaber_female
ENSORLG00000009135	farsb	100	73.390	ENSHGLG00100001035	FARSB	100	75.593	Heterocephalus_glaber_male
ENSORLG00000009135	farsb	91	79.017	ENSHCOG00000016462	farsb	100	80.410	Hippocampus_comes
ENSORLG00000009135	farsb	100	81.154	ENSIPUG00000002754	farsb	100	83.701	Ictalurus_punctatus
ENSORLG00000009135	farsb	100	73.729	ENSSTOG00000016169	FARSB	100	75.763	Ictidomys_tridecemlineatus
ENSORLG00000009135	farsb	100	73.702	ENSJJAG00000003267	Farsb	100	75.593	Jaculus_jaculus
ENSORLG00000009135	farsb	100	78.849	ENSKMAG00000005363	farsb	100	81.895	Kryptolebias_marmoratus
ENSORLG00000009135	farsb	100	86.927	ENSLBEG00000018127	farsb	100	85.360	Labrus_bergylta
ENSORLG00000009135	farsb	100	77.250	ENSLACG00000002551	FARSB	100	79.457	Latimeria_chalumnae
ENSORLG00000009135	farsb	100	80.985	ENSLOCG00000004136	farsb	100	83.531	Lepisosteus_oculatus
ENSORLG00000009135	farsb	100	72.542	ENSLAFG00000015659	FARSB	100	74.915	Loxodonta_africana
ENSORLG00000009135	farsb	100	72.881	ENSMFAG00000036645	FARSB	100	75.254	Macaca_fascicularis
ENSORLG00000009135	farsb	100	72.384	ENSMMUG00000007685	FARSB	100	72.881	Macaca_mulatta
ENSORLG00000009135	farsb	100	72.712	ENSMNEG00000030672	FARSB	100	75.085	Macaca_nemestrina
ENSORLG00000009135	farsb	100	73.051	ENSMLEG00000042060	FARSB	100	75.424	Mandrillus_leucophaeus
ENSORLG00000009135	farsb	100	88.625	ENSMAMG00000011835	farsb	100	86.941	Mastacembelus_armatus
ENSORLG00000009135	farsb	96	86.702	ENSMZEG00005004544	farsb	100	89.184	Maylandia_zebra
ENSORLG00000009135	farsb	95	74.240	ENSMGAG00000004670	FARSB	100	76.565	Meleagris_gallopavo
ENSORLG00000009135	farsb	72	75.000	ENSMAUG00000017805	Farsb	100	75.000	Mesocricetus_auratus
ENSORLG00000009135	farsb	100	73.729	ENSMICG00000002495	FARSB	100	76.102	Microcebus_murinus
ENSORLG00000009135	farsb	100	73.854	ENSMOCG00000003181	Farsb	100	76.231	Microtus_ochrogaster
ENSORLG00000009135	farsb	100	80.416	ENSMMOG00000006265	farsb	100	80.985	Mola_mola
ENSORLG00000009135	farsb	100	74.703	ENSMODG00000021192	FARSB	100	77.250	Monodelphis_domestica
ENSORLG00000009135	farsb	93	88.203	ENSMALG00000021188	farsb	92	91.107	Monopterus_albus
ENSORLG00000009135	farsb	100	73.898	MGP_CAROLIEiJ_G0014310	Farsb	100	76.102	Mus_caroli
ENSORLG00000009135	farsb	100	73.729	ENSMUSG00000026245	Farsb	100	75.932	Mus_musculus
ENSORLG00000009135	farsb	100	73.898	MGP_PahariEiJ_G0027548	Farsb	100	76.102	Mus_pahari
ENSORLG00000009135	farsb	100	73.729	MGP_SPRETEiJ_G0015116	Farsb	100	75.932	Mus_spretus
ENSORLG00000009135	farsb	100	73.729	ENSMPUG00000016677	FARSB	100	76.271	Mustela_putorius_furo
ENSORLG00000009135	farsb	100	74.237	ENSMLUG00000010904	FARSB	100	76.610	Myotis_lucifugus
ENSORLG00000009135	farsb	100	72.835	ENSNGAG00000014602	Farsb	100	75.212	Nannospalax_galili
ENSORLG00000009135	farsb	100	89.474	ENSNBRG00000003198	farsb	100	87.382	Neolamprologus_brichardi
ENSORLG00000009135	farsb	100	73.220	ENSNLEG00000009638	FARSB	100	75.593	Nomascus_leucogenys
ENSORLG00000009135	farsb	100	65.025	ENSMEUG00000010798	FARSB	100	67.572	Notamacropus_eugenii
ENSORLG00000009135	farsb	100	56.949	ENSOPRG00000003292	FARSB	89	70.000	Ochotona_princeps
ENSORLG00000009135	farsb	100	73.898	ENSODEG00000005451	FARSB	100	76.271	Octodon_degus
ENSORLG00000009135	farsb	100	89.983	ENSONIG00000014639	farsb	100	92.360	Oreochromis_niloticus
ENSORLG00000009135	farsb	91	72.150	ENSOANG00000015387	FARSB	99	74.906	Ornithorhynchus_anatinus
ENSORLG00000009135	farsb	91	73.655	ENSOCUG00000007828	FARSB	94	76.252	Oryctolagus_cuniculus
ENSORLG00000009135	farsb	100	99.122	ENSORLG00015001072	farsb	100	99.122	Oryzias_latipes_hsok
ENSORLG00000009135	farsb	100	94.917	ENSOMEG00000019009	farsb	100	94.917	Oryzias_melastigma
ENSORLG00000009135	farsb	100	70.234	ENSOGAG00000010125	FARSB	100	70.401	Otolemur_garnettii
ENSORLG00000009135	farsb	100	74.068	ENSOARG00000020329	FARSB	100	76.610	Ovis_aries
ENSORLG00000009135	farsb	100	73.559	ENSPPAG00000039268	FARSB	100	75.932	Pan_paniscus
ENSORLG00000009135	farsb	100	73.729	ENSPPRG00000010687	FARSB	100	76.102	Panthera_pardus
ENSORLG00000009135	farsb	100	73.220	ENSPTIG00000004299	FARSB	100	75.932	Panthera_tigris_altaica
ENSORLG00000009135	farsb	100	73.559	ENSPTRG00000012974	FARSB	100	75.932	Pan_troglodytes
ENSORLG00000009135	farsb	100	73.051	ENSPANG00000016304	FARSB	100	75.424	Papio_anubis
ENSORLG00000009135	farsb	100	79.457	ENSPKIG00000006661	farsb	100	82.003	Paramormyrops_kingsleyae
ENSORLG00000009135	farsb	99	75.468	ENSPSIG00000006248	FARSB	99	77.853	Pelodiscus_sinensis
ENSORLG00000009135	farsb	83	85.072	ENSPMGG00000002815	farsb	100	88.344	Periophthalmus_magnuspinnatus
ENSORLG00000009135	farsb	100	73.898	ENSPEMG00000003131	Farsb	100	76.441	Peromyscus_maniculatus_bairdii
ENSORLG00000009135	farsb	100	74.533	ENSPCIG00000019458	FARSB	100	77.080	Phascolarctos_cinereus
ENSORLG00000009135	farsb	100	88.964	ENSPLAG00000001104	farsb	100	86.187	Poecilia_latipinna
ENSORLG00000009135	farsb	100	89.304	ENSPMEG00000017658	farsb	100	86.659	Poecilia_mexicana
ENSORLG00000009135	farsb	100	88.625	ENSPREG00000010583	farsb	100	86.187	Poecilia_reticulata
ENSORLG00000009135	farsb	100	73.220	ENSPPYG00000013221	FARSB	100	75.593	Pongo_abelii
ENSORLG00000009135	farsb	84	64.200	ENSPCAG00000002757	FARSB	85	67.000	Procavia_capensis
ENSORLG00000009135	farsb	66	83.333	ENSPCOG00000028852	FARSB	100	83.333	Propithecus_coquereli
ENSORLG00000009135	farsb	100	73.390	ENSPVAG00000006985	FARSB	100	75.593	Pteropus_vampyrus
ENSORLG00000009135	farsb	100	75.552	ENSPNYG00000011433	farsb	100	77.929	Pundamilia_nyererei
ENSORLG00000009135	farsb	100	81.834	ENSPNAG00000021802	farsb	100	84.380	Pygocentrus_nattereri
ENSORLG00000009135	farsb	100	73.729	ENSRNOG00000014119	Farsb	100	76.102	Rattus_norvegicus
ENSORLG00000009135	farsb	92	72.928	ENSRBIG00000033191	FARSB	98	75.046	Rhinopithecus_bieti
ENSORLG00000009135	farsb	100	73.051	ENSRROG00000029388	FARSB	100	75.424	Rhinopithecus_roxellana
ENSORLG00000009135	farsb	100	43.443	YLR060W	FRS1	100	45.410	Saccharomyces_cerevisiae
ENSORLG00000009135	farsb	100	65.932	ENSSBOG00000019084	FARSB	100	67.966	Saimiri_boliviensis_boliviensis
ENSORLG00000009135	farsb	91	69.104	ENSSHAG00000015752	FARSB	99	71.846	Sarcophilus_harrisii
ENSORLG00000009135	farsb	100	78.778	ENSSFOG00015007850	farsb	100	80.985	Scleropages_formosus
ENSORLG00000009135	farsb	100	88.285	ENSSMAG00000020668	farsb	100	88.625	Scophthalmus_maximus
ENSORLG00000009135	farsb	100	89.304	ENSSDUG00000009685	farsb	100	86.949	Seriola_dumerili
ENSORLG00000009135	farsb	100	89.474	ENSSLDG00000025206	farsb	100	87.294	Seriola_lalandi_dorsalis
ENSORLG00000009135	farsb	60	74.658	ENSSARG00000005655	-	66	74.658	Sorex_araneus
ENSORLG00000009135	farsb	95	72.193	ENSSPUG00000002245	FARSB	100	74.332	Sphenodon_punctatus
ENSORLG00000009135	farsb	100	88.964	ENSSPAG00000007367	farsb	100	87.633	Stegastes_partitus
ENSORLG00000009135	farsb	100	72.881	ENSSSCG00000016226	-	100	75.085	Sus_scrofa
ENSORLG00000009135	farsb	100	67.627	ENSSSCG00000032016	-	100	69.831	Sus_scrofa
ENSORLG00000009135	farsb	97	73.286	ENSTGUG00000007788	FARSB	99	75.923	Taeniopygia_guttata
ENSORLG00000009135	farsb	100	84.041	ENSTRUG00000009483	farsb	100	82.979	Takifugu_rubripes
ENSORLG00000009135	farsb	100	83.531	ENSTNIG00000014310	farsb	100	86.248	Tetraodon_nigroviridis
ENSORLG00000009135	farsb	100	52.203	ENSTBEG00000003136	FARSB	100	52.203	Tupaia_belangeri
ENSORLG00000009135	farsb	88	74.874	ENSTTRG00000009082	FARSB	88	74.874	Tursiops_truncatus
ENSORLG00000009135	farsb	84	68.263	ENSUAMG00000024613	FARSB	99	71.257	Ursus_americanus
ENSORLG00000009135	farsb	100	73.051	ENSUMAG00000017995	FARSB	100	75.593	Ursus_maritimus
ENSORLG00000009135	farsb	91	70.295	ENSVPAG00000006844	FARSB	100	72.694	Vicugna_pacos
ENSORLG00000009135	farsb	100	74.068	ENSVVUG00000024025	FARSB	100	76.271	Vulpes_vulpes
ENSORLG00000009135	farsb	100	73.051	ENSXETG00000002934	farsb	100	75.763	Xenopus_tropicalis
ENSORLG00000009135	farsb	100	87.267	ENSXMAG00000008280	farsb	100	85.596	Xiphophorus_maculatus