EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000009160 (Gene tree)
Gene ID: 101161158
Gene Symbol: e4f1
Alias: -
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8058 bases
Position: chr8:12249723-12257780
Accession: 101161158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000011493	zf-C2H2	PF00096.26	3e-29	1	4
ENSORLP00000011493	zf-C2H2	PF00096.26	3e-29	2	4
ENSORLP00000011493	zf-C2H2	PF00096.26	3e-29	3	4
ENSORLP00000011493	zf-C2H2	PF00096.26	3e-29	4	4
ENSORLP00000011493	zf-met	PF12874.7	4.8e-08	1	2
ENSORLP00000011493	zf-met	PF12874.7	4.8e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000011494	-	3100	XM_004071686	ENSORLP00000011493	761 (aa)	XP_004071734	H2LZC1

Gene Model

Click here to download ENSORLG00000009160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000009160	e4f1	61	43.023	ENSORLG00000010117	-	90	43.023
ENSORLG00000009160	e4f1	56	39.474	ENSORLG00000012434	znf1064	58	39.474
ENSORLG00000009160	e4f1	62	39.759	ENSORLG00000022502	-	91	40.741
ENSORLG00000009160	e4f1	63	41.558	ENSORLG00000012485	-	60	41.558
ENSORLG00000009160	e4f1	65	41.935	ENSORLG00000002307	-	95	41.667
ENSORLG00000009160	e4f1	60	36.527	ENSORLG00000027765	-	76	37.725
ENSORLG00000009160	e4f1	52	44.737	ENSORLG00000023133	-	82	44.737
ENSORLG00000009160	e4f1	76	42.697	ENSORLG00000016247	prdm5	77	42.697
ENSORLG00000009160	e4f1	50	43.210	ENSORLG00000025380	-	71	43.210
ENSORLG00000009160	e4f1	62	40.000	ENSORLG00000000262	-	90	39.865
ENSORLG00000009160	e4f1	54	40.909	ENSORLG00000025719	-	59	40.909
ENSORLG00000009160	e4f1	58	42.500	ENSORLG00000007032	-	99	42.500
ENSORLG00000009160	e4f1	56	40.000	ENSORLG00000030630	-	90	40.000
ENSORLG00000009160	e4f1	61	42.222	ENSORLG00000024399	-	87	42.222
ENSORLG00000009160	e4f1	58	46.154	ENSORLG00000006966	-	93	46.753
ENSORLG00000009160	e4f1	56	36.486	ENSORLG00000022699	-	85	45.455
ENSORLG00000009160	e4f1	62	40.000	ENSORLG00000025576	-	97	42.373
ENSORLG00000009160	e4f1	69	42.529	ENSORLG00000028323	-	95	42.105
ENSORLG00000009160	e4f1	62	45.455	ENSORLG00000024896	-	81	45.455
ENSORLG00000009160	e4f1	60	36.585	ENSORLG00000007009	-	99	47.500
ENSORLG00000009160	e4f1	63	40.260	ENSORLG00000016981	-	95	40.260
ENSORLG00000009160	e4f1	56	34.524	ENSORLG00000024789	-	70	40.909
ENSORLG00000009160	e4f1	60	45.000	ENSORLG00000000253	-	98	45.000
ENSORLG00000009160	e4f1	62	40.741	ENSORLG00000027418	-	66	40.741
ENSORLG00000009160	e4f1	88	34.409	ENSORLG00000002268	-	94	49.231
ENSORLG00000009160	e4f1	52	39.634	ENSORLG00000027186	-	91	40.909
ENSORLG00000009160	e4f1	56	45.000	ENSORLG00000007263	-	90	44.156
ENSORLG00000009160	e4f1	56	42.254	ENSORLG00000028168	-	94	42.254
ENSORLG00000009160	e4f1	50	41.176	ENSORLG00000022704	-	65	41.176
ENSORLG00000009160	e4f1	62	38.298	ENSORLG00000025080	-	99	40.789
ENSORLG00000009160	e4f1	81	37.288	ENSORLG00000007885	znf646	63	37.975
ENSORLG00000009160	e4f1	63	40.217	ENSORLG00000027982	-	99	40.909
ENSORLG00000009160	e4f1	58	43.077	ENSORLG00000024174	-	79	40.606
ENSORLG00000009160	e4f1	62	42.623	ENSORLG00000027822	-	88	43.713
ENSORLG00000009160	e4f1	76	39.344	ENSORLG00000023806	-	95	40.845
ENSORLG00000009160	e4f1	77	40.678	ENSORLG00000025717	-	99	40.678
ENSORLG00000009160	e4f1	81	44.444	ENSORLG00000007097	-	97	44.444
ENSORLG00000009160	e4f1	71	36.905	ENSORLG00000012472	znf319b	80	40.260
ENSORLG00000009160	e4f1	62	40.373	ENSORLG00000001749	-	91	45.161
ENSORLG00000009160	e4f1	82	38.462	ENSORLG00000013344	znf574	81	40.157
ENSORLG00000009160	e4f1	56	43.750	ENSORLG00000011040	-	86	46.575
ENSORLG00000009160	e4f1	79	38.182	ENSORLG00000000076	ZNF319	78	41.558
ENSORLG00000009160	e4f1	62	38.462	ENSORLG00000024652	-	98	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009160	e4f1	100	70.146	ENSCSEG00000015852	e4f1	98	61.529	Cynoglossus_semilaevis
ENSORLG00000009160	e4f1	100	73.177	ENSCVAG00000002788	e4f1	100	73.958	Cyprinodon_variegatus
ENSORLG00000009160	e4f1	99	72.010	ENSFHEG00000022551	e4f1	97	71.176	Fundulus_heteroclitus
ENSORLG00000009160	e4f1	83	64.275	ENSGMOG00000011409	e4f1	96	64.587	Gadus_morhua
ENSORLG00000009160	e4f1	100	72.445	ENSGACG00000011808	e4f1	100	72.294	Gasterosteus_aculeatus
ENSORLG00000009160	e4f1	100	66.325	ENSHCOG00000016455	e4f1	100	65.557	Hippocampus_comes
ENSORLG00000009160	e4f1	100	52.979	ENSIPUG00000005379	e4f1	99	51.876	Ictalurus_punctatus
ENSORLG00000009160	e4f1	100	73.624	ENSLBEG00000026373	e4f1	100	75.032	Labrus_bergylta
ENSORLG00000009160	e4f1	100	68.564	ENSMMOG00000007612	e4f1	100	68.693	Mola_mola
ENSORLG00000009160	e4f1	100	74.840	ENSMALG00000007314	e4f1	100	74.165	Monopterus_albus
ENSORLG00000009160	e4f1	100	95.426	ENSORLG00020017974	e4f1	100	95.426	Oryzias_latipes_hni
ENSORLG00000009160	e4f1	100	98.292	ENSORLG00015007385	e4f1	100	98.292	Oryzias_latipes_hsok
ENSORLG00000009160	e4f1	100	92.651	ENSOMEG00000012220	e4f1	100	92.257	Oryzias_melastigma
ENSORLG00000009160	e4f1	100	55.838	ENSPKIG00000001942	e4f1	99	55.400	Paramormyrops_kingsleyae
ENSORLG00000009160	e4f1	53	87.671	ENSPMGG00000020527	e4f1	90	87.671	Periophthalmus_magnuspinnatus
ENSORLG00000009160	e4f1	99	52.742	ENSSFOG00015021291	e4f1	98	60.089	Scleropages_formosus
ENSORLG00000009160	e4f1	100	75.418	ENSSMAG00000014720	e4f1	100	76.062	Scophthalmus_maximus
ENSORLG00000009160	e4f1	96	48.303	ENSSPUG00000011420	E4F1	94	48.090	Sphenodon_punctatus
ENSORLG00000009160	e4f1	100	68.348	ENSTRUG00000005176	e4f1	100	69.861	Takifugu_rubripes
ENSORLG00000009160	e4f1	96	68.032	ENSTNIG00000018001	e4f1	100	68.032	Tetraodon_nigroviridis
ENSORLG00000009160	e4f1	79	67.257	ENSXETG00000016091	e4f1	99	66.071	Xenopus_tropicalis