EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000009188 (Gene tree)
Gene ID: 101157014
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 27203 bases
Position: chr21:3995609-4022811
Accession: 101157014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000045912	RNase_Zc3h12a	PF11977.8	1.9e-64	1	1
ENSORLP00000011526	RNase_Zc3h12a	PF11977.8	4.2e-64	1	1
ENSORLP00000033200	RNase_Zc3h12a	PF11977.8	4.3e-64	1	1
ENSORLP00000036493	RNase_Zc3h12a	PF11977.8	4.3e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000011527	-	2601	-	ENSORLP00000011526	866 (aa)	-	H2LZF4
ENSORLT00000045765	-	1641	-	ENSORLP00000045912	546 (aa)	-	-
ENSORLT00000042307	-	5287	-	ENSORLP00000033200	884 (aa)	-	UPI0002A4883D
ENSORLT00000027900	-	5386	XM_023951145	ENSORLP00000036493	884 (aa)	XP_023806913	UPI0002A4883D

Gene Model

Click here to download ENSORLG00000009188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000009188	-	99	39.956	ENSORLG00000029243	-	95	47.170
ENSORLG00000009188	-	55	60.067	ENSORLG00000015280	-	53	59.459
ENSORLG00000009188	-	58	71.651	ENSORLG00000009556	zc3h12b	58	65.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009188	-	56	73.115	ENSG00000102053	ZC3H12B	71	57.111	Homo_sapiens
ENSORLG00000009188	-	58	73.651	ENSAPOG00000001738	zc3h12b	53	71.429	Acanthochromis_polyacanthus
ENSORLG00000009188	-	97	84.036	ENSACIG00000005689	-	74	84.255	Amphilophus_citrinellus
ENSORLG00000009188	-	61	73.502	ENSACIG00000009787	zc3h12b	61	70.988	Amphilophus_citrinellus
ENSORLG00000009188	-	61	73.333	ENSAOCG00000010094	zc3h12b	60	71.739	Amphiprion_ocellaris
ENSORLG00000009188	-	58	73.333	ENSAPEG00000007479	zc3h12b	53	71.739	Amphiprion_percula
ENSORLG00000009188	-	60	71.212	ENSATEG00000011175	zc3h12b	54	70.303	Anabas_testudineus
ENSORLG00000009188	-	54	73.737	ENSAPLG00000003874	ZC3H12B	99	73.401	Anas_platyrhynchos
ENSORLG00000009188	-	58	71.111	ENSACAG00000013582	ZC3H12B	58	66.860	Anolis_carolinensis
ENSORLG00000009188	-	56	72.787	ENSANAG00000010296	ZC3H12B	59	66.189	Aotus_nancymaae
ENSORLG00000009188	-	58	73.333	ENSACLG00000007669	zc3h12b	59	66.393	Astatotilapia_calliptera
ENSORLG00000009188	-	97	69.725	ENSAMXG00000005320	-	99	43.252	Astyanax_mexicanus
ENSORLG00000009188	-	63	69.118	ENSAMXG00000011328	zc3h12b	53	69.118	Astyanax_mexicanus
ENSORLG00000009188	-	92	49.770	ENSAMXG00000038308	-	99	43.367	Astyanax_mexicanus
ENSORLG00000009188	-	56	73.770	ENSBTAG00000002206	ZC3H12B	59	66.859	Bos_taurus
ENSORLG00000009188	-	56	73.115	ENSCJAG00000001427	ZC3H12B	59	66.571	Callithrix_jacchus
ENSORLG00000009188	-	56	73.115	ENSCAFG00000031307	ZC3H12B	56	65.616	Canis_familiaris
ENSORLG00000009188	-	56	73.115	ENSCAFG00020017995	ZC3H12B	56	65.616	Canis_lupus_dingo
ENSORLG00000009188	-	56	73.443	ENSTSYG00000011302	ZC3H12B	71	57.562	Carlito_syrichta
ENSORLG00000009188	-	56	72.787	ENSCCAG00000030171	ZC3H12B	59	66.189	Cebus_capucinus
ENSORLG00000009188	-	56	73.115	ENSCATG00000044845	ZC3H12B	71	57.111	Cercocebus_atys
ENSORLG00000009188	-	63	66.570	ENSCLAG00000003600	ZC3H12B	69	57.631	Chinchilla_lanigera
ENSORLG00000009188	-	64	68.713	ENSCPBG00000006983	ZC3H12B	65	68.129	Chrysemys_picta_bellii
ENSORLG00000009188	-	56	73.115	ENSCANG00000006746	ZC3H12B	59	66.476	Colobus_angolensis_palliatus
ENSORLG00000009188	-	56	72.403	ENSCGRG00001018643	Zc3h12b	63	58.654	Cricetulus_griseus_chok1gshd
ENSORLG00000009188	-	56	72.403	ENSCGRG00000015623	Zc3h12b	63	58.654	Cricetulus_griseus_crigri
ENSORLG00000009188	-	69	63.590	ENSCSEG00000013686	zc3h12b	68	63.038	Cynoglossus_semilaevis
ENSORLG00000009188	-	61	73.125	ENSCVAG00000010473	zc3h12b	60	72.698	Cyprinodon_variegatus
ENSORLG00000009188	-	63	67.143	ENSDARG00000062463	zc3h12b	65	67.435	Danio_rerio
ENSORLG00000009188	-	68	68.563	ENSDNOG00000038439	ZC3H12B	64	67.449	Dasypus_novemcinctus
ENSORLG00000009188	-	75	58.352	ENSDORG00000024832	Zc3h12b	68	66.282	Dipodomys_ordii
ENSORLG00000009188	-	56	63.279	ENSEASG00005006995	ZC3H12B	70	49.775	Equus_asinus_asinus
ENSORLG00000009188	-	56	73.443	ENSECAG00000020993	ZC3H12B	95	53.731	Equus_caballus
ENSORLG00000009188	-	56	73.115	ENSFCAG00000032299	ZC3H12B	60	65.706	Felis_catus
ENSORLG00000009188	-	53	73.448	ENSFALG00000004293	ZC3H12B	69	73.103	Ficedula_albicollis
ENSORLG00000009188	-	61	68.072	ENSFDAG00000014258	ZC3H12B	63	57.482	Fukomys_damarensis
ENSORLG00000009188	-	58	72.698	ENSFHEG00000002391	zc3h12b	58	66.027	Fundulus_heteroclitus
ENSORLG00000009188	-	97	82.012	ENSFHEG00000014717	-	93	85.197	Fundulus_heteroclitus
ENSORLG00000009188	-	64	72.063	ENSGALG00000039391	ZC3H12B	64	67.151	Gallus_gallus
ENSORLG00000009188	-	64	69.741	ENSGAFG00000006871	zc3h12b	53	72.930	Gambusia_affinis
ENSORLG00000009188	-	98	81.682	ENSGAFG00000004701	-	99	57.470	Gambusia_affinis
ENSORLG00000009188	-	64	69.006	ENSGAGG00000005569	ZC3H12B	65	68.421	Gopherus_agassizii
ENSORLG00000009188	-	56	73.115	ENSGGOG00000024638	ZC3H12B	71	57.111	Gorilla_gorilla
ENSORLG00000009188	-	58	73.333	ENSHBUG00000000645	zc3h12b	58	67.033	Haplochromis_burtoni
ENSORLG00000009188	-	97	82.985	ENSHBUG00000003376	-	91	70.779	Haplochromis_burtoni
ENSORLG00000009188	-	56	71.475	ENSHGLG00000003107	ZC3H12B	67	56.689	Heterocephalus_glaber_female
ENSORLG00000009188	-	56	71.475	ENSHGLG00100010721	ZC3H12B	67	56.689	Heterocephalus_glaber_male
ENSORLG00000009188	-	55	71.429	ENSHCOG00000017425	-	89	71.429	Hippocampus_comes
ENSORLG00000009188	-	58	70.807	ENSHCOG00000008487	zc3h12b	57	65.819	Hippocampus_comes
ENSORLG00000009188	-	97	77.090	ENSIPUG00000014830	-	73	76.615	Ictalurus_punctatus
ENSORLG00000009188	-	63	67.941	ENSIPUG00000016745	zc3h12b	55	67.246	Ictalurus_punctatus
ENSORLG00000009188	-	56	72.787	ENSSTOG00000020962	ZC3H12B	69	57.466	Ictidomys_tridecemlineatus
ENSORLG00000009188	-	64	71.711	ENSJJAG00000015755	Zc3h12b	55	64.620	Jaculus_jaculus
ENSORLG00000009188	-	60	70.695	ENSKMAG00000004921	zc3h12b	53	68.788	Kryptolebias_marmoratus
ENSORLG00000009188	-	60	69.880	ENSLBEG00000006448	zc3h12b	57	66.038	Labrus_bergylta
ENSORLG00000009188	-	64	72.381	ENSLACG00000014526	ZC3H12B	63	67.930	Latimeria_chalumnae
ENSORLG00000009188	-	69	77.607	ENSLOCG00000010717	-	97	46.432	Lepisosteus_oculatus
ENSORLG00000009188	-	63	67.733	ENSLOCG00000014631	zc3h12b	56	68.116	Lepisosteus_oculatus
ENSORLG00000009188	-	57	71.519	ENSLAFG00000014891	ZC3H12B	55	67.449	Loxodonta_africana
ENSORLG00000009188	-	56	73.115	ENSMFAG00000042237	ZC3H12B	71	57.111	Macaca_fascicularis
ENSORLG00000009188	-	56	73.115	ENSMMUG00000012261	ZC3H12B	71	57.111	Macaca_mulatta
ENSORLG00000009188	-	56	73.115	ENSMNEG00000043003	ZC3H12B	71	57.111	Macaca_nemestrina
ENSORLG00000009188	-	56	73.115	ENSMLEG00000042630	ZC3H12B	71	57.111	Mandrillus_leucophaeus
ENSORLG00000009188	-	69	63.846	ENSMAMG00000011770	zc3h12b	67	63.291	Mastacembelus_armatus
ENSORLG00000009188	-	58	73.333	ENSMZEG00005007548	zc3h12b	61	63.683	Maylandia_zebra
ENSORLG00000009188	-	64	72.063	ENSMGAG00000000759	ZC3H12B	63	67.836	Meleagris_gallopavo
ENSORLG00000009188	-	56	72.727	ENSMAUG00000017800	Zc3h12b	55	65.805	Mesocricetus_auratus
ENSORLG00000009188	-	74	58.352	ENSMICG00000010697	ZC3H12B	80	57.562	Microcebus_murinus
ENSORLG00000009188	-	56	72.964	ENSMOCG00000000094	Zc3h12b	68	67.742	Microtus_ochrogaster
ENSORLG00000009188	-	64	68.300	ENSMMOG00000008734	zc3h12b	65	67.232	Mola_mola
ENSORLG00000009188	-	66	66.854	ENSMODG00000005206	ZC3H12B	66	66.205	Monodelphis_domestica
ENSORLG00000009188	-	99	81.818	ENSMALG00000016807	-	99	62.042	Monopterus_albus
ENSORLG00000009188	-	61	65.015	ENSMALG00000021153	zc3h12b	68	59.783	Monopterus_albus
ENSORLG00000009188	-	56	72.078	ENSMUSG00000035045	Zc3h12b	66	82.857	Mus_musculus
ENSORLG00000009188	-	56	71.475	MGP_PahariEiJ_G0031787	Zc3h12b	54	67.988	Mus_pahari
ENSORLG00000009188	-	56	72.078	MGP_SPRETEiJ_G0034413	Zc3h12b	55	66.862	Mus_spretus
ENSORLG00000009188	-	56	71.803	ENSMPUG00000001162	ZC3H12B	58	65.418	Mustela_putorius_furo
ENSORLG00000009188	-	60	69.552	ENSMLUG00000013635	ZC3H12B	60	66.006	Myotis_lucifugus
ENSORLG00000009188	-	58	73.016	ENSNBRG00000014889	zc3h12b	56	69.912	Neolamprologus_brichardi
ENSORLG00000009188	-	56	73.115	ENSNLEG00000000383	ZC3H12B	71	57.111	Nomascus_leucogenys
ENSORLG00000009188	-	54	75.875	ENSMEUG00000014075	ZC3H12B	61	75.676	Notamacropus_eugenii
ENSORLG00000009188	-	66	66.575	ENSONIG00000012867	zc3h12b	65	66.575	Oreochromis_niloticus
ENSORLG00000009188	-	57	72.168	ENSOCUG00000006130	ZC3H12B	51	76.154	Oryctolagus_cuniculus
ENSORLG00000009188	-	58	71.651	ENSORLG00020021793	zc3h12b	56	65.642	Oryzias_latipes_hni
ENSORLG00000009188	-	100	97.964	ENSORLG00020019033	-	100	97.964	Oryzias_latipes_hni
ENSORLG00000009188	-	100	98.077	ENSORLG00015020619	-	100	98.077	Oryzias_latipes_hsok
ENSORLG00000009188	-	58	71.963	ENSORLG00015004818	zc3h12b	56	65.922	Oryzias_latipes_hsok
ENSORLG00000009188	-	58	71.739	ENSOMEG00000005768	zc3h12b	65	60.000	Oryzias_melastigma
ENSORLG00000009188	-	97	96.296	ENSOMEG00000018642	-	100	86.629	Oryzias_melastigma
ENSORLG00000009188	-	56	73.115	ENSOGAG00000029439	ZC3H12B	70	57.373	Otolemur_garnettii
ENSORLG00000009188	-	56	73.684	ENSOARG00000004959	ZC3H12B	59	66.571	Ovis_aries
ENSORLG00000009188	-	56	73.115	ENSPPAG00000039530	ZC3H12B	71	57.111	Pan_paniscus
ENSORLG00000009188	-	56	73.115	ENSPTRG00000021969	ZC3H12B	71	57.111	Pan_troglodytes
ENSORLG00000009188	-	56	73.115	ENSPANG00000007944	ZC3H12B	71	57.111	Papio_anubis
ENSORLG00000009188	-	58	72.063	ENSPKIG00000019893	ZC3H12B	60	69.075	Paramormyrops_kingsleyae
ENSORLG00000009188	-	73	74.716	ENSPKIG00000012595	-	94	47.176	Paramormyrops_kingsleyae
ENSORLG00000009188	-	62	69.027	ENSPKIG00000012946	zc3h12b	62	67.552	Paramormyrops_kingsleyae
ENSORLG00000009188	-	64	68.713	ENSPSIG00000016853	ZC3H12B	65	68.129	Pelodiscus_sinensis
ENSORLG00000009188	-	60	68.769	ENSPMGG00000006009	zc3h12b	58	68.824	Periophthalmus_magnuspinnatus
ENSORLG00000009188	-	67	64.130	ENSPCIG00000020264	ZC3H12B	67	63.686	Phascolarctos_cinereus
ENSORLG00000009188	-	83	56.332	ENSPFOG00000019365	zc3h12b	53	72.381	Poecilia_formosa
ENSORLG00000009188	-	83	56.550	ENSPLAG00000011981	zc3h12b	50	71.118	Poecilia_latipinna
ENSORLG00000009188	-	83	50.873	ENSPMEG00000002552	zc3h12b	51	64.444	Poecilia_mexicana
ENSORLG00000009188	-	83	55.482	ENSPREG00000020794	zc3h12b	53	70.807	Poecilia_reticulata
ENSORLG00000009188	-	50	76.448	ENSPPYG00000020416	ZC3H12B	55	76.448	Pongo_abelii
ENSORLG00000009188	-	56	73.443	ENSPCOG00000020467	ZC3H12B	67	58.629	Propithecus_coquereli
ENSORLG00000009188	-	50	60.769	ENSPVAG00000017352	ZC3H12B	55	60.769	Pteropus_vampyrus
ENSORLG00000009188	-	58	73.333	ENSPNYG00000018012	zc3h12b	58	67.033	Pundamilia_nyererei
ENSORLG00000009188	-	96	83.988	ENSPNYG00000007151	-	96	80.769	Pundamilia_nyererei
ENSORLG00000009188	-	70	78.593	ENSPNAG00000017483	-	73	76.900	Pygocentrus_nattereri
ENSORLG00000009188	-	68	63.472	ENSPNAG00000002567	zc3h12b	65	66.022	Pygocentrus_nattereri
ENSORLG00000009188	-	56	72.403	ENSRNOG00000011508	Zc3h12b	68	68.103	Rattus_norvegicus
ENSORLG00000009188	-	56	73.115	ENSRBIG00000036402	ZC3H12B	69	57.111	Rhinopithecus_bieti
ENSORLG00000009188	-	56	73.115	ENSRROG00000036004	ZC3H12B	69	57.111	Rhinopithecus_roxellana
ENSORLG00000009188	-	56	72.787	ENSSBOG00000004095	ZC3H12B	59	66.189	Saimiri_boliviensis_boliviensis
ENSORLG00000009188	-	66	65.000	ENSSHAG00000006530	ZC3H12B	66	64.543	Sarcophilus_harrisii
ENSORLG00000009188	-	82	56.209	ENSSFOG00015012866	ZC3H12B	59	69.186	Scleropages_formosus
ENSORLG00000009188	-	60	70.213	ENSSFOG00015008769	zc3h12b	59	66.857	Scleropages_formosus
ENSORLG00000009188	-	58	72.611	ENSSMAG00000018309	zc3h12b	59	61.832	Scophthalmus_maximus
ENSORLG00000009188	-	62	71.341	ENSSDUG00000014078	zc3h12b	86	67.470	Seriola_dumerili
ENSORLG00000009188	-	69	63.939	ENSSLDG00000018895	zc3h12b	67	62.750	Seriola_lalandi_dorsalis
ENSORLG00000009188	-	61	73.016	ENSSPAG00000022460	zc3h12b	60	71.429	Stegastes_partitus
ENSORLG00000009188	-	56	72.727	ENSSSCG00000012367	ZC3H12B	59	67.742	Sus_scrofa
ENSORLG00000009188	-	64	72.698	ENSTGUG00000002846	ZC3H12B	87	42.728	Taeniopygia_guttata
ENSORLG00000009188	-	60	68.072	ENSTRUG00000012186	zc3h12b	71	60.814	Takifugu_rubripes
ENSORLG00000009188	-	74	78.979	ENSTRUG00000015402	-	93	80.480	Takifugu_rubripes
ENSORLG00000009188	-	56	72.459	ENSUAMG00000005098	ZC3H12B	60	65.616	Ursus_americanus
ENSORLG00000009188	-	56	72.459	ENSUMAG00000017054	ZC3H12B	60	65.616	Ursus_maritimus
ENSORLG00000009188	-	50	70.229	ENSVPAG00000009070	ZC3H12B	55	70.115	Vicugna_pacos
ENSORLG00000009188	-	56	73.115	ENSVVUG00000022686	ZC3H12B	51	70.418	Vulpes_vulpes
ENSORLG00000009188	-	60	71.692	ENSXCOG00000006151	zc3h12b	57	69.527	Xiphophorus_couchianus
ENSORLG00000009188	-	95	79.279	ENSXCOG00000007996	-	89	81.301	Xiphophorus_couchianus
ENSORLG00000009188	-	60	71.692	ENSXMAG00000018548	zc3h12b	53	72.698	Xiphophorus_maculatus