EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000009219 (Gene tree)
Gene ID: 101171192
Gene Symbol: rpp38
Alias: -
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 828 bases
Position: chr16:17913875-17914702
Accession: 101171192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000011561	Ribosomal_L7Ae	PF01248.26	5.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000011562	-	828	XM_011485250	ENSORLP00000011561	275 (aa)	XP_011483552	H2LZI9

Gene Model

Click here to download ENSORLG00000009219's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG
ola03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009219	rpp38	96	39.858	ENSG00000152464	RPP38	88	45.455	Homo_sapiens
ENSORLG00000009219	rpp38	95	62.319	ENSAPOG00000001240	rpp38	95	61.624	Acanthochromis_polyacanthus
ENSORLG00000009219	rpp38	96	43.841	ENSAMEG00000018832	RPP38	90	42.966	Ailuropoda_melanoleuca
ENSORLG00000009219	rpp38	95	70.522	ENSACIG00000011592	rpp38	97	71.642	Amphilophus_citrinellus
ENSORLG00000009219	rpp38	95	61.404	ENSAOCG00000017293	rpp38	96	60.351	Amphiprion_ocellaris
ENSORLG00000009219	rpp38	95	64.835	ENSAPEG00000002315	rpp38	95	64.552	Amphiprion_percula
ENSORLG00000009219	rpp38	97	65.455	ENSATEG00000000731	rpp38	97	65.428	Anabas_testudineus
ENSORLG00000009219	rpp38	91	44.444	ENSAPLG00000002054	RPP38	91	44.828	Anas_platyrhynchos
ENSORLG00000009219	rpp38	95	68.561	ENSACLG00000016962	rpp38	96	70.566	Astatotilapia_calliptera
ENSORLG00000009219	rpp38	95	68.182	ENSACLG00000016958	rpp38	96	70.189	Astatotilapia_calliptera
ENSORLG00000009219	rpp38	91	46.275	ENSAMXG00000025023	rpp38	93	45.926	Astyanax_mexicanus
ENSORLG00000009219	rpp38	96	42.804	ENSBTAG00000007702	RPP38	90	45.556	Bos_taurus
ENSORLG00000009219	rpp38	96	44.981	ENSCAFG00000024373	RPP38	90	45.247	Canis_familiaris
ENSORLG00000009219	rpp38	96	44.981	ENSCAFG00020008008	RPP38	90	45.247	Canis_lupus_dingo
ENSORLG00000009219	rpp38	93	43.182	ENSCHIG00000012484	RPP38	88	45.247	Capra_hircus
ENSORLG00000009219	rpp38	96	42.336	ENSCPOG00000003981	RPP38	90	41.852	Cavia_porcellus
ENSORLG00000009219	rpp38	96	42.391	ENSCLAG00000010194	RPP38	90	42.424	Chinchilla_lanigera
ENSORLG00000009219	rpp38	91	40.377	ENSCSAG00000019055	RPP38	88	41.634	Chlorocebus_sabaeus
ENSORLG00000009219	rpp38	96	43.463	ENSCHOG00000004335	RPP38	90	43.015	Choloepus_hoffmanni
ENSORLG00000009219	rpp38	96	42.963	ENSCGRG00001001395	Rpp38	87	42.857	Cricetulus_griseus_chok1gshd
ENSORLG00000009219	rpp38	96	42.963	ENSCGRG00000017441	Rpp38	87	42.857	Cricetulus_griseus_crigri
ENSORLG00000009219	rpp38	95	60.985	ENSCSEG00000001721	rpp38	96	60.985	Cynoglossus_semilaevis
ENSORLG00000009219	rpp38	95	61.029	ENSCVAG00000001676	rpp38	95	63.004	Cyprinodon_variegatus
ENSORLG00000009219	rpp38	96	49.635	ENSDARG00000040350	rpp38	95	49.446	Danio_rerio
ENSORLG00000009219	rpp38	96	42.909	ENSDNOG00000040314	RPP38	90	42.066	Dasypus_novemcinctus
ENSORLG00000009219	rpp38	96	41.606	ENSDORG00000009783	Rpp38	90	40.152	Dipodomys_ordii
ENSORLG00000009219	rpp38	96	42.804	ENSETEG00000002839	RPP38	90	42.692	Echinops_telfairi
ENSORLG00000009219	rpp38	97	41.516	ENSEASG00005019783	RPP38	89	43.123	Equus_asinus_asinus
ENSORLG00000009219	rpp38	96	40.138	ENSEEUG00000014677	RPP38	90	41.007	Erinaceus_europaeus
ENSORLG00000009219	rpp38	95	51.890	ENSELUG00000010160	rpp38	97	50.859	Esox_lucius
ENSORLG00000009219	rpp38	96	43.682	ENSFCAG00000022449	RPP38	90	42.751	Felis_catus
ENSORLG00000009219	rpp38	91	46.360	ENSFALG00000014804	RPP38	89	45.149	Ficedula_albicollis
ENSORLG00000009219	rpp38	96	42.199	ENSFDAG00000018669	RPP38	90	43.182	Fukomys_damarensis
ENSORLG00000009219	rpp38	95	63.768	ENSFHEG00000013741	rpp38	96	64.855	Fundulus_heteroclitus
ENSORLG00000009219	rpp38	92	46.538	ENSGALG00000008794	RPP38	87	42.545	Gallus_gallus
ENSORLG00000009219	rpp38	57	72.956	ENSGACG00000009258	rpp38	99	72.956	Gasterosteus_aculeatus
ENSORLG00000009219	rpp38	95	68.182	ENSHBUG00000010937	rpp38	96	70.189	Haplochromis_burtoni
ENSORLG00000009219	rpp38	96	42.561	ENSHGLG00000012144	RPP38	90	44.280	Heterocephalus_glaber_female
ENSORLG00000009219	rpp38	91	46.215	ENSIPUG00000022879	rpp38	90	49.219	Ictalurus_punctatus
ENSORLG00000009219	rpp38	96	41.667	ENSSTOG00000025699	RPP38	86	42.642	Ictidomys_tridecemlineatus
ENSORLG00000009219	rpp38	96	42.960	ENSJJAG00000007523	Rpp38	90	43.233	Jaculus_jaculus
ENSORLG00000009219	rpp38	92	64.479	ENSKMAG00000003986	rpp38	90	64.479	Kryptolebias_marmoratus
ENSORLG00000009219	rpp38	97	69.343	ENSLBEG00000006853	rpp38	97	69.030	Labrus_bergylta
ENSORLG00000009219	rpp38	89	42.491	ENSLACG00000006502	RPP38	62	51.351	Latimeria_chalumnae
ENSORLG00000009219	rpp38	97	46.479	ENSLOCG00000018347	rpp38	94	47.122	Lepisosteus_oculatus
ENSORLG00000009219	rpp38	94	43.066	ENSLAFG00000000509	RPP38	88	45.136	Loxodonta_africana
ENSORLG00000009219	rpp38	91	40.000	ENSMMUG00000007679	RPP38	88	41.245	Macaca_mulatta
ENSORLG00000009219	rpp38	97	66.045	ENSMAMG00000012774	rpp38	95	66.160	Mastacembelus_armatus
ENSORLG00000009219	rpp38	95	68.939	ENSMZEG00005003189	rpp38	96	70.943	Maylandia_zebra
ENSORLG00000009219	rpp38	95	68.182	ENSMZEG00005003200	rpp38	96	70.189	Maylandia_zebra
ENSORLG00000009219	rpp38	92	45.769	ENSMGAG00000008217	RPP38	87	45.769	Meleagris_gallopavo
ENSORLG00000009219	rpp38	96	42.491	ENSMAUG00000003644	Rpp38	87	43.254	Mesocricetus_auratus
ENSORLG00000009219	rpp38	96	41.026	ENSMOCG00000007020	Rpp38	88	41.961	Microtus_ochrogaster
ENSORLG00000009219	rpp38	97	65.428	ENSMMOG00000003446	rpp38	96	65.283	Mola_mola
ENSORLG00000009219	rpp38	92	41.603	ENSMODG00000024091	RPP38	91	43.295	Monodelphis_domestica
ENSORLG00000009219	rpp38	97	62.724	ENSMALG00000002356	rpp38	96	62.637	Monopterus_albus
ENSORLG00000009219	rpp38	96	43.590	MGP_CAROLIEiJ_G0023133	Rpp38	90	43.295	Mus_caroli
ENSORLG00000009219	rpp38	96	42.491	ENSMUSG00000049950	Rpp38	90	42.146	Mus_musculus
ENSORLG00000009219	rpp38	96	43.590	MGP_PahariEiJ_G0019193	Rpp38	90	42.912	Mus_pahari
ENSORLG00000009219	rpp38	96	42.491	MGP_SPRETEiJ_G0024051	Rpp38	90	42.146	Mus_spretus
ENSORLG00000009219	rpp38	97	44.604	ENSMPUG00000018523	RPP38	90	43.284	Mustela_putorius_furo
ENSORLG00000009219	rpp38	91	42.023	ENSMLUG00000002153	RPP38	89	42.857	Myotis_lucifugus
ENSORLG00000009219	rpp38	96	41.818	ENSNGAG00000011066	Rpp38	88	43.182	Nannospalax_galili
ENSORLG00000009219	rpp38	92	70.356	ENSNBRG00000006994	rpp38	92	73.123	Neolamprologus_brichardi
ENSORLG00000009219	rpp38	95	70.189	ENSONIG00000020467	rpp38	95	71.698	Oreochromis_niloticus
ENSORLG00000009219	rpp38	91	41.065	ENSOCUG00000022768	-	87	42.085	Oryctolagus_cuniculus
ENSORLG00000009219	rpp38	91	41.825	ENSOCUG00000024367	-	87	42.857	Oryctolagus_cuniculus
ENSORLG00000009219	rpp38	100	95.683	ENSORLG00020011503	rpp38	97	95.683	Oryzias_latipes_hni
ENSORLG00000009219	rpp38	100	94.604	ENSORLG00015017702	rpp38	97	94.604	Oryzias_latipes_hsok
ENSORLG00000009219	rpp38	96	83.774	ENSOMEG00000005414	rpp38	100	83.929	Oryzias_melastigma
ENSORLG00000009219	rpp38	96	44.086	ENSOGAG00000008059	RPP38	88	44.747	Otolemur_garnettii
ENSORLG00000009219	rpp38	93	43.561	ENSOARG00000004534	RPP38	88	45.247	Ovis_aries
ENSORLG00000009219	rpp38	96	40.357	ENSPPAG00000041577	RPP38	80	41.509	Pan_paniscus
ENSORLG00000009219	rpp38	96	43.206	ENSPPRG00000015329	RPP38	90	43.382	Panthera_pardus
ENSORLG00000009219	rpp38	96	43.253	ENSPTIG00000007188	RPP38	90	42.705	Panthera_tigris_altaica
ENSORLG00000009219	rpp38	96	40.357	ENSPTRG00000002318	RPP38	80	41.509	Pan_troglodytes
ENSORLG00000009219	rpp38	94	47.445	ENSPKIG00000025652	rpp38	89	47.566	Paramormyrops_kingsleyae
ENSORLG00000009219	rpp38	96	43.542	ENSPSIG00000001527	RPP38	91	43.462	Pelodiscus_sinensis
ENSORLG00000009219	rpp38	96	43.431	ENSPEMG00000008375	Rpp38	88	44.314	Peromyscus_maniculatus_bairdii
ENSORLG00000009219	rpp38	96	45.804	ENSPCIG00000009096	RPP38	86	46.743	Phascolarctos_cinereus
ENSORLG00000009219	rpp38	76	61.137	ENSPFOG00000016823	rpp38	94	61.194	Poecilia_formosa
ENSORLG00000009219	rpp38	99	60.993	ENSPLAG00000007626	rpp38	96	61.029	Poecilia_latipinna
ENSORLG00000009219	rpp38	95	56.506	ENSPMEG00000020392	rpp38	96	56.877	Poecilia_mexicana
ENSORLG00000009219	rpp38	99	61.786	ENSPREG00000017744	rpp38	96	62.222	Poecilia_reticulata
ENSORLG00000009219	rpp38	96	40.357	ENSPPYG00000002113	RPP38	88	41.667	Pongo_abelii
ENSORLG00000009219	rpp38	91	41.697	ENSPVAG00000007155	RPP38	90	42.804	Pteropus_vampyrus
ENSORLG00000009219	rpp38	95	68.561	ENSPNYG00000004293	rpp38	96	70.566	Pundamilia_nyererei
ENSORLG00000009219	rpp38	91	49.206	ENSPNAG00000010633	rpp38	90	48.828	Pygocentrus_nattereri
ENSORLG00000009219	rpp38	93	46.388	ENSRNOG00000038025	Rpp38	90	46.693	Rattus_norvegicus
ENSORLG00000009219	rpp38	96	42.308	ENSSHAG00000015529	RPP38	91	44.061	Sarcophilus_harrisii
ENSORLG00000009219	rpp38	94	65.504	ENSSMAG00000018276	rpp38	91	65.476	Scophthalmus_maximus
ENSORLG00000009219	rpp38	95	65.779	ENSSDUG00000001651	rpp38	96	66.667	Seriola_dumerili
ENSORLG00000009219	rpp38	95	66.160	ENSSLDG00000014355	rpp38	96	67.045	Seriola_lalandi_dorsalis
ENSORLG00000009219	rpp38	96	39.623	ENSSARG00000012099	RPP38	89	39.526	Sorex_araneus
ENSORLG00000009219	rpp38	97	41.935	ENSSPUG00000008560	-	92	41.445	Sphenodon_punctatus
ENSORLG00000009219	rpp38	99	43.003	ENSSPUG00000018363	-	91	43.182	Sphenodon_punctatus
ENSORLG00000009219	rpp38	97	45.161	ENSSPUG00000005237	-	90	43.820	Sphenodon_punctatus
ENSORLG00000009219	rpp38	95	62.642	ENSSPAG00000020387	rpp38	95	62.642	Stegastes_partitus
ENSORLG00000009219	rpp38	93	41.516	ENSSSCG00000027110	RPP38	88	40.892	Sus_scrofa
ENSORLG00000009219	rpp38	91	45.174	ENSTGUG00000001366	RPP38	91	43.284	Taeniopygia_guttata
ENSORLG00000009219	rpp38	97	60.364	ENSTNIG00000001334	rpp38	96	61.423	Tetraodon_nigroviridis
ENSORLG00000009219	rpp38	96	43.214	ENSTTRG00000004420	RPP38	90	43.284	Tursiops_truncatus
ENSORLG00000009219	rpp38	93	43.223	ENSUAMG00000002618	RPP38	90	43.726	Ursus_americanus
ENSORLG00000009219	rpp38	96	43.945	ENSUMAG00000012382	RPP38	90	43.774	Ursus_maritimus
ENSORLG00000009219	rpp38	96	44.981	ENSVVUG00000005272	RPP38	90	44.867	Vulpes_vulpes
ENSORLG00000009219	rpp38	95	41.304	ENSXETG00000003419	rpp38	96	40.925	Xenopus_tropicalis