EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000009312 (Gene tree)
Gene ID: 101162369
Gene Symbol: tbl3
Alias: -
Full Name: transducin beta like 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 12871 bases
Position: chr8:12350310-12363180
Accession: 101162369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000035802	Utp13	PF08625.11	5.1e-41	1	1
ENSORLP00000011681	Utp13	PF08625.11	5.1e-41	1	1
ENSORLP00000040308	Utp13	PF08625.11	5.9e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000011682	-	2544	-	ENSORLP00000011681	847 (aa)	-	H2LZV8
ENSORLT00000040288	-	3798	XM_023957580	ENSORLP00000040308	929 (aa)	XP_023813348	UPI0009DB4BD3
ENSORLT00000030560	-	3955	-	ENSORLP00000035802	843 (aa)	-	-

Gene Model

Click here to download ENSORLG00000009312's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000009312	tbl3	73	34.756	ENSORLG00000012185	wdr5	94	34.756
ENSORLG00000009312	tbl3	57	31.897	ENSORLG00000001904	wdr61	97	31.959
ENSORLG00000009312	tbl3	83	30.290	ENSORLG00000019641	prpf4	58	33.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009312	tbl3	95	62.593	ENSG00000183751	TBL3	98	62.701	Homo_sapiens
ENSORLG00000009312	tbl3	96	86.527	ENSAPOG00000021308	tbl3	100	80.106	Acanthochromis_polyacanthus
ENSORLG00000009312	tbl3	94	61.258	ENSAMEG00000017654	TBL3	98	61.000	Ailuropoda_melanoleuca
ENSORLG00000009312	tbl3	95	87.516	ENSACIG00000007459	tbl3	99	87.940	Amphilophus_citrinellus
ENSORLG00000009312	tbl3	96	87.021	ENSAOCG00000000453	tbl3	100	80.426	Amphiprion_ocellaris
ENSORLG00000009312	tbl3	94	87.218	ENSAPEG00000010228	tbl3	99	87.218	Amphiprion_percula
ENSORLG00000009312	tbl3	95	87.469	ENSATEG00000024571	tbl3	98	82.987	Anabas_testudineus
ENSORLG00000009312	tbl3	90	52.202	ENSAPLG00000008515	TBL3	98	60.933	Anas_platyrhynchos
ENSORLG00000009312	tbl3	94	62.954	ENSANAG00000030472	TBL3	98	62.954	Aotus_nancymaae
ENSORLG00000009312	tbl3	95	88.323	ENSACLG00000027954	tbl3	99	82.296	Astatotilapia_calliptera
ENSORLG00000009312	tbl3	95	77.086	ENSAMXG00000042589	tbl3	98	71.382	Astyanax_mexicanus
ENSORLG00000009312	tbl3	95	62.189	ENSBTAG00000020366	TBL3	97	62.189	Bos_taurus
ENSORLG00000009312	tbl3	93	31.824	WBGene00013143	Y53C12B.1	99	31.746	Caenorhabditis_elegans
ENSORLG00000009312	tbl3	95	62.593	ENSCJAG00000015245	TBL3	98	62.593	Callithrix_jacchus
ENSORLG00000009312	tbl3	95	60.468	ENSCAFG00000019430	TBL3	98	67.778	Canis_familiaris
ENSORLG00000009312	tbl3	95	60.617	ENSCAFG00020026321	TBL3	99	60.617	Canis_lupus_dingo
ENSORLG00000009312	tbl3	95	61.893	ENSCHIG00000007747	TBL3	97	61.893	Capra_hircus
ENSORLG00000009312	tbl3	95	61.443	ENSTSYG00000036142	TBL3	98	61.443	Carlito_syrichta
ENSORLG00000009312	tbl3	94	57.625	ENSCAPG00000016762	TBL3	96	57.481	Cavia_aperea
ENSORLG00000009312	tbl3	95	62.189	ENSCPOG00000005998	TBL3	98	62.189	Cavia_porcellus
ENSORLG00000009312	tbl3	95	62.716	ENSCCAG00000034486	TBL3	98	62.825	Cebus_capucinus
ENSORLG00000009312	tbl3	95	62.222	ENSCATG00000031298	TBL3	99	61.840	Cercocebus_atys
ENSORLG00000009312	tbl3	95	62.017	ENSCLAG00000013342	TBL3	98	62.017	Chinchilla_lanigera
ENSORLG00000009312	tbl3	95	61.852	ENSCSAG00000011191	TBL3	99	61.548	Chlorocebus_sabaeus
ENSORLG00000009312	tbl3	94	67.207	ENSCPBG00000000253	TBL3	97	67.207	Chrysemys_picta_bellii
ENSORLG00000009312	tbl3	94	46.941	ENSCING00000009521	-	99	46.941	Ciona_intestinalis
ENSORLG00000009312	tbl3	95	62.222	ENSCANG00000031169	TBL3	99	61.916	Colobus_angolensis_palliatus
ENSORLG00000009312	tbl3	95	62.765	ENSCGRG00001021817	Tbl3	98	62.765	Cricetulus_griseus_chok1gshd
ENSORLG00000009312	tbl3	95	62.765	ENSCGRG00000013364	Tbl3	98	62.765	Cricetulus_griseus_crigri
ENSORLG00000009312	tbl3	95	85.590	ENSCSEG00000015634	tbl3	100	81.818	Cynoglossus_semilaevis
ENSORLG00000009312	tbl3	95	86.392	ENSCVAG00000002720	tbl3	99	84.993	Cyprinodon_variegatus
ENSORLG00000009312	tbl3	95	65.963	ENSDARG00000052344	tbl3	93	64.421	Danio_rerio
ENSORLG00000009312	tbl3	84	54.749	ENSDNOG00000019996	TBL3	98	54.533	Dasypus_novemcinctus
ENSORLG00000009312	tbl3	94	63.019	ENSDORG00000007377	Tbl3	97	62.954	Dipodomys_ordii
ENSORLG00000009312	tbl3	93	33.456	FBgn0033454	CG1671	99	33.456	Drosophila_melanogaster
ENSORLG00000009312	tbl3	81	65.000	ENSETEG00000019403	TBL3	85	65.000	Echinops_telfairi
ENSORLG00000009312	tbl3	95	54.286	ENSEBUG00000003526	tbl3	98	52.033	Eptatretus_burgeri
ENSORLG00000009312	tbl3	95	61.644	ENSEASG00005004649	TBL3	98	61.644	Equus_asinus_asinus
ENSORLG00000009312	tbl3	95	61.644	ENSECAG00000019299	TBL3	98	61.644	Equus_caballus
ENSORLG00000009312	tbl3	76	67.100	ENSEEUG00000000761	-	60	66.738	Erinaceus_europaeus
ENSORLG00000009312	tbl3	95	59.333	ENSELUG00000007394	tbl3	99	59.333	Esox_lucius
ENSORLG00000009312	tbl3	95	62.017	ENSFCAG00000011740	TBL3	99	61.834	Felis_catus
ENSORLG00000009312	tbl3	95	63.391	ENSFALG00000003409	TBL3	98	63.693	Ficedula_albicollis
ENSORLG00000009312	tbl3	95	62.142	ENSFDAG00000007751	TBL3	98	62.142	Fukomys_damarensis
ENSORLG00000009312	tbl3	95	87.313	ENSFHEG00000002234	tbl3	99	80.687	Fundulus_heteroclitus
ENSORLG00000009312	tbl3	95	67.215	ENSGMOG00000011562	tbl3	99	76.427	Gadus_morhua
ENSORLG00000009312	tbl3	96	63.681	ENSGALG00000005558	TBL3	99	63.692	Gallus_gallus
ENSORLG00000009312	tbl3	95	86.940	ENSGAFG00000020165	tbl3	99	81.617	Gambusia_affinis
ENSORLG00000009312	tbl3	95	84.882	ENSGACG00000011960	tbl3	99	84.882	Gasterosteus_aculeatus
ENSORLG00000009312	tbl3	94	67.537	ENSGAGG00000024028	TBL3	97	67.537	Gopherus_agassizii
ENSORLG00000009312	tbl3	95	62.593	ENSGGOG00000009378	TBL3	98	62.701	Gorilla_gorilla
ENSORLG00000009312	tbl3	95	88.199	ENSHBUG00000011872	tbl3	99	83.420	Haplochromis_burtoni
ENSORLG00000009312	tbl3	95	62.313	ENSHGLG00000002431	TBL3	99	62.129	Heterocephalus_glaber_female
ENSORLG00000009312	tbl3	95	61.318	ENSHGLG00100012878	TBL3	99	61.139	Heterocephalus_glaber_male
ENSORLG00000009312	tbl3	95	83.147	ENSHCOG00000016689	tbl3	99	76.931	Hippocampus_comes
ENSORLG00000009312	tbl3	95	76.244	ENSIPUG00000003568	TBL3	97	71.064	Ictalurus_punctatus
ENSORLG00000009312	tbl3	94	62.875	ENSSTOG00000012964	TBL3	98	62.875	Ictidomys_tridecemlineatus
ENSORLG00000009312	tbl3	95	62.640	ENSJJAG00000004124	Tbl3	98	62.640	Jaculus_jaculus
ENSORLG00000009312	tbl3	95	86.318	ENSKMAG00000020117	tbl3	99	84.224	Kryptolebias_marmoratus
ENSORLG00000009312	tbl3	96	85.080	ENSLBEG00000026742	tbl3	99	79.634	Labrus_bergylta
ENSORLG00000009312	tbl3	95	67.658	ENSLACG00000000615	TBL3	99	67.658	Latimeria_chalumnae
ENSORLG00000009312	tbl3	95	74.627	ENSLOCG00000008853	tbl3	98	68.593	Lepisosteus_oculatus
ENSORLG00000009312	tbl3	95	60.772	ENSLAFG00000004699	TBL3	98	61.021	Loxodonta_africana
ENSORLG00000009312	tbl3	95	62.222	ENSMFAG00000030302	TBL3	99	61.916	Macaca_fascicularis
ENSORLG00000009312	tbl3	95	62.099	ENSMMUG00000007943	TBL3	99	61.911	Macaca_mulatta
ENSORLG00000009312	tbl3	95	62.052	ENSMNEG00000032603	TBL3	98	62.052	Macaca_nemestrina
ENSORLG00000009312	tbl3	94	61.863	ENSMLEG00000043359	TBL3	99	61.863	Mandrillus_leucophaeus
ENSORLG00000009312	tbl3	95	87.608	ENSMAMG00000023507	tbl3	99	81.537	Mastacembelus_armatus
ENSORLG00000009312	tbl3	95	88.323	ENSMZEG00005000630	tbl3	99	82.296	Maylandia_zebra
ENSORLG00000009312	tbl3	96	63.313	ENSMGAG00000005694	TBL3	99	63.313	Meleagris_gallopavo
ENSORLG00000009312	tbl3	95	62.811	ENSMAUG00000008718	Tbl3	98	62.811	Mesocricetus_auratus
ENSORLG00000009312	tbl3	95	62.640	ENSMICG00000012787	TBL3	87	62.222	Microcebus_murinus
ENSORLG00000009312	tbl3	95	63.014	ENSMOCG00000019634	Tbl3	98	63.014	Microtus_ochrogaster
ENSORLG00000009312	tbl3	95	84.491	ENSMMOG00000007551	tbl3	99	81.690	Mola_mola
ENSORLG00000009312	tbl3	94	62.017	ENSMODG00000016091	TBL3	98	62.017	Monodelphis_domestica
ENSORLG00000009312	tbl3	95	87.485	ENSMALG00000007013	tbl3	97	82.618	Monopterus_albus
ENSORLG00000009312	tbl3	94	63.125	MGP_CAROLIEiJ_G0021199	Tbl3	98	63.014	Mus_caroli
ENSORLG00000009312	tbl3	94	62.875	ENSMUSG00000040688	Tbl3	99	70.000	Mus_musculus
ENSORLG00000009312	tbl3	94	63.000	MGP_PahariEiJ_G0023516	Tbl3	98	62.889	Mus_pahari
ENSORLG00000009312	tbl3	94	62.875	MGP_SPRETEiJ_G0022110	Tbl3	99	70.000	Mus_spretus
ENSORLG00000009312	tbl3	95	61.768	ENSMPUG00000015545	TBL3	98	61.768	Mustela_putorius_furo
ENSORLG00000009312	tbl3	95	62.516	ENSMLUG00000011684	TBL3	98	62.516	Myotis_lucifugus
ENSORLG00000009312	tbl3	95	62.017	ENSNGAG00000002428	Tbl3	98	62.017	Nannospalax_galili
ENSORLG00000009312	tbl3	95	84.020	ENSNBRG00000003173	tbl3	99	84.020	Neolamprologus_brichardi
ENSORLG00000009312	tbl3	95	62.222	ENSNLEG00000008889	TBL3	98	62.330	Nomascus_leucogenys
ENSORLG00000009312	tbl3	88	47.710	ENSMEUG00000004011	TBL3	99	48.728	Notamacropus_eugenii
ENSORLG00000009312	tbl3	91	60.233	ENSOPRG00000002527	-	95	60.233	Ochotona_princeps
ENSORLG00000009312	tbl3	95	61.519	ENSODEG00000013930	TBL3	98	61.519	Octodon_degus
ENSORLG00000009312	tbl3	96	87.995	ENSONIG00000002319	tbl3	98	88.191	Oreochromis_niloticus
ENSORLG00000009312	tbl3	94	60.579	ENSOANG00000009819	TBL3	99	60.705	Ornithorhynchus_anatinus
ENSORLG00000009312	tbl3	100	98.932	ENSORLG00020017711	tbl3	100	98.932	Oryzias_latipes_hni
ENSORLG00000009312	tbl3	100	99.031	ENSORLG00015007004	tbl3	100	99.031	Oryzias_latipes_hsok
ENSORLG00000009312	tbl3	100	92.926	ENSOMEG00000012684	tbl3	100	92.605	Oryzias_melastigma
ENSORLG00000009312	tbl3	95	60.772	ENSOGAG00000010104	TBL3	98	60.772	Otolemur_garnettii
ENSORLG00000009312	tbl3	77	56.949	ENSOARG00000017059	TBL3	99	56.949	Ovis_aries
ENSORLG00000009312	tbl3	95	62.346	ENSPPAG00000041939	TBL3	98	62.454	Pan_paniscus
ENSORLG00000009312	tbl3	95	61.893	ENSPPRG00000000893	TBL3	99	61.710	Panthera_pardus
ENSORLG00000009312	tbl3	94	64.968	ENSPTIG00000010377	TBL3	99	64.632	Panthera_tigris_altaica
ENSORLG00000009312	tbl3	95	62.469	ENSPTRG00000007621	TBL3	98	62.577	Pan_troglodytes
ENSORLG00000009312	tbl3	95	61.852	ENSPANG00000007024	TBL3	98	61.852	Papio_anubis
ENSORLG00000009312	tbl3	95	71.252	ENSPKIG00000000136	tbl3	94	68.445	Paramormyrops_kingsleyae
ENSORLG00000009312	tbl3	94	66.625	ENSPSIG00000013024	TBL3	97	66.708	Pelodiscus_sinensis
ENSORLG00000009312	tbl3	94	82.456	ENSPMGG00000020660	tbl3	97	82.663	Periophthalmus_magnuspinnatus
ENSORLG00000009312	tbl3	94	63.158	ENSPEMG00000009768	Tbl3	98	63.178	Peromyscus_maniculatus_bairdii
ENSORLG00000009312	tbl3	86	54.986	ENSPMAG00000004860	tbl3	99	52.590	Petromyzon_marinus
ENSORLG00000009312	tbl3	94	61.146	ENSPCIG00000021811	TBL3	97	61.146	Phascolarctos_cinereus
ENSORLG00000009312	tbl3	95	86.816	ENSPFOG00000009834	tbl3	100	79.656	Poecilia_formosa
ENSORLG00000009312	tbl3	95	86.816	ENSPLAG00000016437	tbl3	100	79.763	Poecilia_latipinna
ENSORLG00000009312	tbl3	95	86.816	ENSPMEG00000019513	tbl3	100	79.656	Poecilia_mexicana
ENSORLG00000009312	tbl3	95	62.346	ENSPPYG00000006977	TBL3	98	62.454	Pongo_abelii
ENSORLG00000009312	tbl3	95	62.889	ENSPCOG00000019749	TBL3	98	62.469	Propithecus_coquereli
ENSORLG00000009312	tbl3	94	63.534	ENSPVAG00000016710	TBL3	98	63.534	Pteropus_vampyrus
ENSORLG00000009312	tbl3	94	79.000	ENSPNYG00000017137	tbl3	98	79.543	Pundamilia_nyererei
ENSORLG00000009312	tbl3	95	76.990	ENSPNAG00000017527	tbl3	98	74.679	Pygocentrus_nattereri
ENSORLG00000009312	tbl3	95	62.640	ENSRNOG00000013429	Tbl3	98	62.640	Rattus_norvegicus
ENSORLG00000009312	tbl3	95	57.953	ENSRBIG00000032982	TBL3	98	57.953	Rhinopithecus_bieti
ENSORLG00000009312	tbl3	95	61.975	ENSRROG00000026697	TBL3	99	61.671	Rhinopithecus_roxellana
ENSORLG00000009312	tbl3	95	62.716	ENSSBOG00000013923	TBL3	98	62.825	Saimiri_boliviensis_boliviensis
ENSORLG00000009312	tbl3	94	61.816	ENSSHAG00000015266	TBL3	97	61.816	Sarcophilus_harrisii
ENSORLG00000009312	tbl3	95	71.801	ENSSFOG00015023537	tbl3	98	66.127	Scleropages_formosus
ENSORLG00000009312	tbl3	95	86.156	ENSSMAG00000014338	tbl3	99	84.950	Scophthalmus_maximus
ENSORLG00000009312	tbl3	95	87.685	ENSSDUG00000008158	tbl3	99	81.896	Seriola_dumerili
ENSORLG00000009312	tbl3	95	87.901	ENSSLDG00000023733	tbl3	99	85.093	Seriola_lalandi_dorsalis
ENSORLG00000009312	tbl3	93	50.886	ENSSPUG00000012939	TBL3	98	51.050	Sphenodon_punctatus
ENSORLG00000009312	tbl3	96	87.053	ENSSPAG00000010659	tbl3	98	82.217	Stegastes_partitus
ENSORLG00000009312	tbl3	95	65.106	ENSSSCG00000037686	TBL3	98	61.146	Sus_scrofa
ENSORLG00000009312	tbl3	94	61.750	ENSTGUG00000006592	-	100	61.923	Taeniopygia_guttata
ENSORLG00000009312	tbl3	96	82.534	ENSTRUG00000007010	tbl3	97	78.571	Takifugu_rubripes
ENSORLG00000009312	tbl3	96	81.829	ENSTNIG00000018011	tbl3	99	82.010	Tetraodon_nigroviridis
ENSORLG00000009312	tbl3	95	60.497	ENSTTRG00000011395	TBL3	98	60.347	Tursiops_truncatus
ENSORLG00000009312	tbl3	94	61.905	ENSUAMG00000019276	TBL3	98	61.644	Ursus_americanus
ENSORLG00000009312	tbl3	93	60.248	ENSUMAG00000022149	TBL3	96	59.852	Ursus_maritimus
ENSORLG00000009312	tbl3	95	61.146	ENSVVUG00000009589	TBL3	98	61.146	Vulpes_vulpes
ENSORLG00000009312	tbl3	95	60.049	ENSXETG00000007217	tbl3	97	60.123	Xenopus_tropicalis
ENSORLG00000009312	tbl3	95	86.567	ENSXCOG00000010277	tbl3	99	86.567	Xiphophorus_couchianus
ENSORLG00000009312	tbl3	95	86.816	ENSXMAG00000014866	tbl3	97	83.014	Xiphophorus_maculatus