EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000009474 (Gene tree)
Gene ID: 101174064
Gene Symbol: -
Alias: -
Full Name: HMG box-containing protein 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6541 bases
Position: chr23:3591478-3598018
Accession: 101174064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000011873	AXH	PF08517.12	5.3e-36	1	1
ENSORLP00000044592	AXH	PF08517.12	5.9e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000011874	-	1699	XM_011490880	ENSORLP00000011873	498 (aa)	XP_011489182	H2M0E9
ENSORLT00000040414	-	1750	-	ENSORLP00000044592	515 (aa)	-	-

Gene Model

Click here to download ENSORLG00000009474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000009474	-	92	57.667	ENSORLG00000004396	hbp1	99	58.369

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009474	-	99	53.831	ENSG00000105856	HBP1	97	62.500	Homo_sapiens
ENSORLG00000009474	-	92	58.963	ENSAPOG00000015816	hbp1	99	60.515	Acanthochromis_polyacanthus
ENSORLG00000009474	-	99	53.448	ENSAMEG00000013492	HBP1	99	53.257	Ailuropoda_melanoleuca
ENSORLG00000009474	-	91	59.780	ENSACIG00000018873	hbp1	90	61.572	Amphilophus_citrinellus
ENSORLG00000009474	-	99	72.289	ENSACIG00000019093	-	96	72.490	Amphilophus_citrinellus
ENSORLG00000009474	-	100	75.197	ENSAOCG00000001429	-	100	75.787	Amphiprion_ocellaris
ENSORLG00000009474	-	92	59.179	ENSAOCG00000010889	hbp1	99	60.730	Amphiprion_ocellaris
ENSORLG00000009474	-	92	58.963	ENSAPEG00000002330	hbp1	99	60.515	Amphiprion_percula
ENSORLG00000009474	-	100	75.889	ENSAPEG00000022589	-	100	75.889	Amphiprion_percula
ENSORLG00000009474	-	92	59.013	ENSATEG00000016411	hbp1	99	60.300	Anabas_testudineus
ENSORLG00000009474	-	99	73.904	ENSATEG00000003902	-	98	75.106	Anabas_testudineus
ENSORLG00000009474	-	99	53.346	ENSAPLG00000007110	HBP1	99	53.143	Anas_platyrhynchos
ENSORLG00000009474	-	99	52.591	ENSACAG00000015023	HBP1	99	53.359	Anolis_carolinensis
ENSORLG00000009474	-	99	53.831	ENSANAG00000022302	HBP1	93	65.126	Aotus_nancymaae
ENSORLG00000009474	-	99	74.455	ENSACLG00000003606	HBP1	100	74.455	Astatotilapia_calliptera
ENSORLG00000009474	-	92	59.179	ENSACLG00000004758	hbp1	95	60.730	Astatotilapia_calliptera
ENSORLG00000009474	-	99	60.827	ENSAMXG00000017678	hbp1	97	60.583	Astyanax_mexicanus
ENSORLG00000009474	-	99	52.896	ENSBTAG00000005524	HBP1	98	52.987	Bos_taurus
ENSORLG00000009474	-	99	54.023	ENSCJAG00000016260	HBP1	94	65.126	Callithrix_jacchus
ENSORLG00000009474	-	99	53.077	ENSCAFG00000003939	HBP1	98	53.077	Canis_familiaris
ENSORLG00000009474	-	99	53.077	ENSCAFG00020023119	HBP1	98	53.077	Canis_lupus_dingo
ENSORLG00000009474	-	99	53.089	ENSCHIG00000024405	HBP1	99	53.179	Capra_hircus
ENSORLG00000009474	-	99	52.772	ENSTSYG00000010057	HBP1	99	52.581	Carlito_syrichta
ENSORLG00000009474	-	99	53.448	ENSCAPG00000017460	HBP1	99	53.257	Cavia_aperea
ENSORLG00000009474	-	99	53.831	ENSCPOG00000002375	HBP1	98	53.640	Cavia_porcellus
ENSORLG00000009474	-	99	53.448	ENSCCAG00000026359	HBP1	94	65.126	Cebus_capucinus
ENSORLG00000009474	-	99	54.406	ENSCATG00000021910	HBP1	99	54.215	Cercocebus_atys
ENSORLG00000009474	-	99	53.640	ENSCLAG00000005170	HBP1	99	53.448	Chinchilla_lanigera
ENSORLG00000009474	-	99	54.598	ENSCSAG00000011395	HBP1	98	54.406	Chlorocebus_sabaeus
ENSORLG00000009474	-	69	82.000	ENSCHOG00000006820	HBP1	60	82.000	Choloepus_hoffmanni
ENSORLG00000009474	-	99	53.831	ENSCPBG00000000954	HBP1	97	53.640	Chrysemys_picta_bellii
ENSORLG00000009474	-	99	53.831	ENSCANG00000022804	HBP1	99	53.640	Colobus_angolensis_palliatus
ENSORLG00000009474	-	99	52.207	ENSCGRG00001014437	Hbp1	98	52.015	Cricetulus_griseus_chok1gshd
ENSORLG00000009474	-	99	52.207	ENSCGRG00000013859	Hbp1	98	52.015	Cricetulus_griseus_crigri
ENSORLG00000009474	-	92	59.227	ENSCSEG00000003373	hbp1	99	60.515	Cynoglossus_semilaevis
ENSORLG00000009474	-	99	73.747	ENSCVAG00000008501	-	99	73.948	Cyprinodon_variegatus
ENSORLG00000009474	-	92	59.227	ENSCVAG00000008930	hbp1	99	60.515	Cyprinodon_variegatus
ENSORLG00000009474	-	99	59.319	ENSDARG00000028517	hbp1	100	60.321	Danio_rerio
ENSORLG00000009474	-	99	53.640	ENSDNOG00000004405	HBP1	95	53.448	Dasypus_novemcinctus
ENSORLG00000009474	-	69	49.036	ENSDORG00000010576	Hbp1	97	48.760	Dipodomys_ordii
ENSORLG00000009474	-	99	48.269	ENSETEG00000018542	HBP1	99	48.077	Echinops_telfairi
ENSORLG00000009474	-	91	44.148	ENSEBUG00000016475	hbp1	84	44.353	Eptatretus_burgeri
ENSORLG00000009474	-	99	52.885	ENSEASG00005017469	HBP1	91	53.077	Equus_asinus_asinus
ENSORLG00000009474	-	99	53.077	ENSECAG00000020969	HBP1	98	53.269	Equus_caballus
ENSORLG00000009474	-	99	60.239	ENSELUG00000017031	-	93	59.843	Esox_lucius
ENSORLG00000009474	-	92	62.017	ENSELUG00000006967	hbp1	98	61.373	Esox_lucius
ENSORLG00000009474	-	99	53.065	ENSFCAG00000005858	HBP1	91	53.257	Felis_catus
ENSORLG00000009474	-	99	53.333	ENSFALG00000010259	HBP1	97	53.143	Ficedula_albicollis
ENSORLG00000009474	-	99	53.435	ENSFDAG00000007897	HBP1	98	53.244	Fukomys_damarensis
ENSORLG00000009474	-	92	58.963	ENSFHEG00000008222	hbp1	99	60.730	Fundulus_heteroclitus
ENSORLG00000009474	-	99	72.000	ENSFHEG00000014389	-	99	72.000	Fundulus_heteroclitus
ENSORLG00000009474	-	92	58.065	ENSGMOG00000013782	hbp1	99	59.355	Gadus_morhua
ENSORLG00000009474	-	99	53.435	ENSGALG00000008050	HBP1	97	53.155	Gallus_gallus
ENSORLG00000009474	-	99	74.900	ENSGAFG00000004651	-	99	74.900	Gambusia_affinis
ENSORLG00000009474	-	92	58.531	ENSGAFG00000021976	hbp1	99	60.300	Gambusia_affinis
ENSORLG00000009474	-	94	71.610	ENSGACG00000019192	-	96	71.610	Gasterosteus_aculeatus
ENSORLG00000009474	-	92	58.672	ENSGACG00000010054	hbp1	99	59.957	Gasterosteus_aculeatus
ENSORLG00000009474	-	99	53.346	ENSGAGG00000023042	HBP1	97	53.346	Gopherus_agassizii
ENSORLG00000009474	-	99	53.831	ENSGGOG00000007788	HBP1	94	64.854	Gorilla_gorilla
ENSORLG00000009474	-	92	59.395	ENSHBUG00000004967	hbp1	95	60.944	Haplochromis_burtoni
ENSORLG00000009474	-	99	75.248	ENSHBUG00000016198	-	100	75.248	Haplochromis_burtoni
ENSORLG00000009474	-	99	53.654	ENSHGLG00000019188	HBP1	98	53.654	Heterocephalus_glaber_female
ENSORLG00000009474	-	99	40.272	ENSHGLG00100014672	-	99	40.039	Heterocephalus_glaber_male
ENSORLG00000009474	-	99	53.654	ENSHGLG00100001912	HBP1	98	53.654	Heterocephalus_glaber_male
ENSORLG00000009474	-	92	57.883	ENSHCOG00000011877	hbp1	99	59.179	Hippocampus_comes
ENSORLG00000009474	-	100	59.719	ENSHCOG00000010740	-	95	59.519	Hippocampus_comes
ENSORLG00000009474	-	99	59.449	ENSIPUG00000023044	hbp1	97	59.843	Ictalurus_punctatus
ENSORLG00000009474	-	99	53.257	ENSSTOG00000013846	HBP1	98	53.065	Ictidomys_tridecemlineatus
ENSORLG00000009474	-	99	53.831	ENSJJAG00000015341	Hbp1	98	53.640	Jaculus_jaculus
ENSORLG00000009474	-	92	59.013	ENSKMAG00000003132	hbp1	99	60.300	Kryptolebias_marmoratus
ENSORLG00000009474	-	93	75.054	ENSKMAG00000000266	-	95	76.573	Kryptolebias_marmoratus
ENSORLG00000009474	-	92	60.086	ENSLBEG00000012078	hbp1	99	61.373	Labrus_bergylta
ENSORLG00000009474	-	99	69.461	ENSLBEG00000023959	-	100	69.461	Labrus_bergylta
ENSORLG00000009474	-	99	54.023	ENSLACG00000009119	HBP1	97	52.751	Latimeria_chalumnae
ENSORLG00000009474	-	99	58.574	ENSLOCG00000015822	hbp1	98	58.382	Lepisosteus_oculatus
ENSORLG00000009474	-	99	52.008	ENSLAFG00000005317	HBP1	99	51.816	Loxodonta_africana
ENSORLG00000009474	-	99	54.406	ENSMFAG00000030375	HBP1	94	65.272	Macaca_fascicularis
ENSORLG00000009474	-	99	54.319	ENSMMUG00000015409	HBP1	95	60.550	Macaca_mulatta
ENSORLG00000009474	-	99	52.816	ENSMNEG00000037516	HBP1	99	52.621	Macaca_nemestrina
ENSORLG00000009474	-	99	54.023	ENSMLEG00000031993	HBP1	99	53.831	Mandrillus_leucophaeus
ENSORLG00000009474	-	92	59.914	ENSMAMG00000023227	hbp1	99	61.207	Mastacembelus_armatus
ENSORLG00000009474	-	99	70.428	ENSMAMG00000023588	-	100	70.428	Mastacembelus_armatus
ENSORLG00000009474	-	99	74.455	ENSMZEG00005015065	HBP1	100	74.455	Maylandia_zebra
ENSORLG00000009474	-	94	57.839	ENSMZEG00005005999	hbp1	79	60.691	Maylandia_zebra
ENSORLG00000009474	-	99	53.346	ENSMGAG00000006880	HBP1	98	53.346	Meleagris_gallopavo
ENSORLG00000009474	-	99	52.099	ENSMAUG00000011449	Hbp1	98	51.908	Mesocricetus_auratus
ENSORLG00000009474	-	99	53.244	ENSMICG00000012858	HBP1	95	64.979	Microcebus_murinus
ENSORLG00000009474	-	99	52.571	ENSMOCG00000019227	Hbp1	98	52.381	Microtus_ochrogaster
ENSORLG00000009474	-	93	72.766	ENSMMOG00000010239	-	99	72.553	Mola_mola
ENSORLG00000009474	-	93	57.725	ENSMMOG00000012207	hbp1	95	56.867	Mola_mola
ENSORLG00000009474	-	99	52.783	ENSMODG00000016376	HBP1	89	52.591	Monodelphis_domestica
ENSORLG00000009474	-	94	69.574	ENSMALG00000010834	-	96	69.574	Monopterus_albus
ENSORLG00000009474	-	92	59.657	ENSMALG00000009884	hbp1	99	60.944	Monopterus_albus
ENSORLG00000009474	-	99	52.462	MGP_CAROLIEiJ_G0017683	Hbp1	98	52.852	Mus_caroli
ENSORLG00000009474	-	99	52.462	ENSMUSG00000002996	Hbp1	98	52.852	Mus_musculus
ENSORLG00000009474	-	99	52.207	MGP_PahariEiJ_G0029441	Hbp1	98	52.207	Mus_pahari
ENSORLG00000009474	-	99	52.462	MGP_SPRETEiJ_G0018525	Hbp1	98	52.852	Mus_spretus
ENSORLG00000009474	-	99	53.462	ENSMPUG00000018249	HBP1	98	53.269	Mustela_putorius_furo
ENSORLG00000009474	-	99	53.372	ENSMLUG00000012425	HBP1	98	53.565	Myotis_lucifugus
ENSORLG00000009474	-	99	52.682	ENSNGAG00000023485	Hbp1	98	52.490	Nannospalax_galili
ENSORLG00000009474	-	99	75.446	ENSNBRG00000017820	-	100	75.446	Neolamprologus_brichardi
ENSORLG00000009474	-	92	59.395	ENSNBRG00000001405	hbp1	95	60.944	Neolamprologus_brichardi
ENSORLG00000009474	-	99	54.023	ENSNLEG00000008761	HBP1	94	64.854	Nomascus_leucogenys
ENSORLG00000009474	-	89	48.408	ENSMEUG00000011116	HBP1	90	48.408	Notamacropus_eugenii
ENSORLG00000009474	-	69	82.000	ENSOPRG00000005315	HBP1	69	82.000	Ochotona_princeps
ENSORLG00000009474	-	92	45.279	ENSODEG00000000482	-	94	45.279	Octodon_degus
ENSORLG00000009474	-	99	39.726	ENSODEG00000010517	-	99	39.726	Octodon_degus
ENSORLG00000009474	-	99	54.215	ENSODEG00000001327	-	98	54.023	Octodon_degus
ENSORLG00000009474	-	99	73.010	ENSONIG00000011868	-	100	72.427	Oreochromis_niloticus
ENSORLG00000009474	-	92	59.611	ENSONIG00000008523	hbp1	99	61.159	Oreochromis_niloticus
ENSORLG00000009474	-	99	53.950	ENSOANG00000003174	HBP1	99	53.757	Ornithorhynchus_anatinus
ENSORLG00000009474	-	99	52.692	ENSOCUG00000012758	HBP1	99	53.191	Oryctolagus_cuniculus
ENSORLG00000009474	-	92	57.940	ENSORLG00020000370	hbp1	99	58.369	Oryzias_latipes_hni
ENSORLG00000009474	-	100	99.197	ENSORLG00020004269	-	100	99.197	Oryzias_latipes_hni
ENSORLG00000009474	-	92	56.803	ENSORLG00015006557	hbp1	99	58.155	Oryzias_latipes_hsok
ENSORLG00000009474	-	100	89.759	ENSOMEG00000013045	-	98	89.759	Oryzias_melastigma
ENSORLG00000009474	-	92	58.099	ENSOMEG00000012837	hbp1	99	59.871	Oryzias_melastigma
ENSORLG00000009474	-	99	52.874	ENSOGAG00000013102	HBP1	99	52.682	Otolemur_garnettii
ENSORLG00000009474	-	99	52.896	ENSOARG00000005055	HBP1	98	52.987	Ovis_aries
ENSORLG00000009474	-	99	53.831	ENSPPAG00000042116	HBP1	94	64.854	Pan_paniscus
ENSORLG00000009474	-	99	53.065	ENSPPRG00000007240	HBP1	99	53.257	Panthera_pardus
ENSORLG00000009474	-	99	51.149	ENSPTIG00000002734	HBP1	99	51.341	Panthera_tigris_altaica
ENSORLG00000009474	-	99	53.831	ENSPTRG00000019575	HBP1	94	64.854	Pan_troglodytes
ENSORLG00000009474	-	99	54.406	ENSPANG00000024385	HBP1	94	65.272	Papio_anubis
ENSORLG00000009474	-	99	57.570	ENSPKIG00000016967	hbp1	98	57.570	Paramormyrops_kingsleyae
ENSORLG00000009474	-	99	53.000	ENSPKIG00000016269	HBP1	98	53.924	Paramormyrops_kingsleyae
ENSORLG00000009474	-	99	54.008	ENSPSIG00000012478	HBP1	92	54.389	Pelodiscus_sinensis
ENSORLG00000009474	-	92	65.217	ENSPMGG00000008031	-	95	64.147	Periophthalmus_magnuspinnatus
ENSORLG00000009474	-	92	60.000	ENSPMGG00000005789	hbp1	95	61.277	Periophthalmus_magnuspinnatus
ENSORLG00000009474	-	99	52.571	ENSPEMG00000014801	Hbp1	98	52.381	Peromyscus_maniculatus_bairdii
ENSORLG00000009474	-	97	46.758	ENSPMAG00000002631	hbp1	99	46.408	Petromyzon_marinus
ENSORLG00000009474	-	99	52.390	ENSPCIG00000004275	HBP1	89	52.008	Phascolarctos_cinereus
ENSORLG00000009474	-	92	58.531	ENSPFOG00000003951	hbp1	99	60.300	Poecilia_formosa
ENSORLG00000009474	-	100	74.349	ENSPFOG00000012271	-	96	74.349	Poecilia_formosa
ENSORLG00000009474	-	93	77.657	ENSPLAG00000012669	-	99	77.657	Poecilia_latipinna
ENSORLG00000009474	-	92	58.531	ENSPLAG00000003142	hbp1	99	60.300	Poecilia_latipinna
ENSORLG00000009474	-	92	58.531	ENSPMEG00000003800	hbp1	99	60.300	Poecilia_mexicana
ENSORLG00000009474	-	99	74.699	ENSPMEG00000015095	-	99	74.699	Poecilia_mexicana
ENSORLG00000009474	-	92	58.531	ENSPREG00000004000	hbp1	99	60.300	Poecilia_reticulata
ENSORLG00000009474	-	58	75.601	ENSPREG00000015242	-	84	75.601	Poecilia_reticulata
ENSORLG00000009474	-	99	53.846	ENSPPYG00000017898	HBP1	97	54.038	Pongo_abelii
ENSORLG00000009474	-	99	52.816	ENSPCAG00000014060	HBP1	100	52.713	Procavia_capensis
ENSORLG00000009474	-	73	59.574	ENSPCOG00000015370	HBP1	87	59.055	Propithecus_coquereli
ENSORLG00000009474	-	99	52.987	ENSPVAG00000014543	HBP1	99	53.179	Pteropus_vampyrus
ENSORLG00000009474	-	99	75.446	ENSPNYG00000015063	HBP1	100	75.446	Pundamilia_nyererei
ENSORLG00000009474	-	94	57.839	ENSPNYG00000001079	hbp1	95	60.730	Pundamilia_nyererei
ENSORLG00000009474	-	99	59.646	ENSPNAG00000029977	hbp1	97	60.433	Pygocentrus_nattereri
ENSORLG00000009474	-	99	52.500	ENSRNOG00000008927	Hbp1	98	52.581	Rattus_norvegicus
ENSORLG00000009474	-	99	47.683	ENSRBIG00000042410	HBP1	99	47.297	Rhinopithecus_bieti
ENSORLG00000009474	-	99	54.215	ENSRROG00000036622	HBP1	94	64.854	Rhinopithecus_roxellana
ENSORLG00000009474	-	99	53.831	ENSSBOG00000023603	HBP1	93	65.126	Saimiri_boliviensis_boliviensis
ENSORLG00000009474	-	99	52.481	ENSSHAG00000010948	HBP1	98	52.290	Sarcophilus_harrisii
ENSORLG00000009474	-	99	59.570	ENSSFOG00015011155	hbp1	100	59.961	Scleropages_formosus
ENSORLG00000009474	-	100	70.196	ENSSMAG00000012631	-	94	71.373	Scophthalmus_maximus
ENSORLG00000009474	-	92	60.259	ENSSMAG00000009892	hbp1	99	61.588	Scophthalmus_maximus
ENSORLG00000009474	-	100	74.951	ENSSDUG00000015387	-	97	75.342	Seriola_dumerili
ENSORLG00000009474	-	92	60.300	ENSSDUG00000022273	hbp1	99	61.588	Seriola_dumerili
ENSORLG00000009474	-	92	60.086	ENSSLDG00000009669	hbp1	99	61.373	Seriola_lalandi_dorsalis
ENSORLG00000009474	-	93	74.113	ENSSLDG00000017324	-	99	74.105	Seriola_lalandi_dorsalis
ENSORLG00000009474	-	89	50.000	ENSSARG00000007731	HBP1	100	49.787	Sorex_araneus
ENSORLG00000009474	-	99	54.023	ENSSPUG00000019157	HBP1	94	54.023	Sphenodon_punctatus
ENSORLG00000009474	-	100	77.976	ENSSPAG00000009193	-	100	78.373	Stegastes_partitus
ENSORLG00000009474	-	92	59.227	ENSSPAG00000004739	hbp1	99	60.515	Stegastes_partitus
ENSORLG00000009474	-	99	53.065	ENSSSCG00000035673	HBP1	99	52.874	Sus_scrofa
ENSORLG00000009474	-	99	52.941	ENSTGUG00000003100	HBP1	100	52.952	Taeniopygia_guttata
ENSORLG00000009474	-	92	59.483	ENSTRUG00000016990	hbp1	99	60.776	Takifugu_rubripes
ENSORLG00000009474	-	92	63.539	ENSTRUG00000011881	-	79	61.224	Takifugu_rubripes
ENSORLG00000009474	-	92	59.785	ENSTNIG00000016027	hbp1	98	61.075	Tetraodon_nigroviridis
ENSORLG00000009474	-	92	63.673	ENSTNIG00000002023	-	93	63.061	Tetraodon_nigroviridis
ENSORLG00000009474	-	99	45.261	ENSTBEG00000007793	HBP1	99	45.455	Tupaia_belangeri
ENSORLG00000009474	-	99	53.654	ENSTTRG00000006826	HBP1	99	53.462	Tursiops_truncatus
ENSORLG00000009474	-	99	53.846	ENSUAMG00000005951	HBP1	98	53.551	Ursus_americanus
ENSORLG00000009474	-	99	54.038	ENSUMAG00000018257	HBP1	98	53.743	Ursus_maritimus
ENSORLG00000009474	-	74	50.639	ENSVPAG00000008629	HBP1	92	50.384	Vicugna_pacos
ENSORLG00000009474	-	99	53.077	ENSVVUG00000022009	HBP1	98	53.077	Vulpes_vulpes
ENSORLG00000009474	-	99	54.598	ENSXETG00000005922	hbp1	99	52.593	Xenopus_tropicalis
ENSORLG00000009474	-	94	57.415	ENSXCOG00000020795	hbp1	93	59.158	Xiphophorus_couchianus
ENSORLG00000009474	-	99	73.896	ENSXMAG00000007586	-	99	74.297	Xiphophorus_maculatus
ENSORLG00000009474	-	92	58.531	ENSXMAG00000016455	hbp1	99	60.086	Xiphophorus_maculatus