EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000009504 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: -
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 1293 bases
Position: chr11:19829070-19830362
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000011915	LSM	PF01423.22	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000011916	-	366	-	ENSORLP00000011915	121 (aa)	-	H2M0J1

Gene Model

Click here to download ENSORLG00000009504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000009504	oscp1a	55	32.836	ENSORLG00000012516	snrpd1	88	31.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009504	oscp1a	98	65.254	ENSG00000181817	LSM10	96	65.254	Homo_sapiens
ENSORLG00000009504	oscp1a	98	65.546	ENSAMEG00000019854	LSM10	97	65.546	Ailuropoda_melanoleuca
ENSORLG00000009504	oscp1a	99	82.500	ENSACIG00000015420	oscp1a	79	82.500	Amphilophus_citrinellus
ENSORLG00000009504	oscp1a	100	80.992	ENSAOCG00000015618	LSM10	100	80.992	Amphiprion_ocellaris
ENSORLG00000009504	oscp1a	100	80.992	ENSAOCG00000014654	-	100	80.992	Amphiprion_ocellaris
ENSORLG00000009504	oscp1a	92	79.464	ENSAOCG00000015607	LSM10	87	79.464	Amphiprion_ocellaris
ENSORLG00000009504	oscp1a	100	80.992	ENSAPEG00000021845	-	100	80.992	Amphiprion_percula
ENSORLG00000009504	oscp1a	92	79.464	ENSAPEG00000021851	LSM10	87	79.464	Amphiprion_percula
ENSORLG00000009504	oscp1a	94	82.456	ENSATEG00000006310	oscp1a	84	82.456	Anabas_testudineus
ENSORLG00000009504	oscp1a	95	63.478	ENSACAG00000001231	LSM10	93	63.478	Anolis_carolinensis
ENSORLG00000009504	oscp1a	98	65.254	ENSANAG00000018759	-	96	65.254	Aotus_nancymaae
ENSORLG00000009504	oscp1a	99	62.500	ENSANAG00000031489	-	98	62.500	Aotus_nancymaae
ENSORLG00000009504	oscp1a	100	81.818	ENSACLG00000004728	oscp1a	98	81.818	Astatotilapia_calliptera
ENSORLG00000009504	oscp1a	100	71.074	ENSAMXG00000025301	oscp1a	100	71.074	Astyanax_mexicanus
ENSORLG00000009504	oscp1a	99	62.500	ENSBTAG00000024096	LSM10	98	62.500	Bos_taurus
ENSORLG00000009504	oscp1a	98	66.102	ENSCJAG00000044880	LSM10	96	66.102	Callithrix_jacchus
ENSORLG00000009504	oscp1a	98	65.546	ENSCAFG00000003382	LSM10	97	65.546	Canis_familiaris
ENSORLG00000009504	oscp1a	98	65.546	ENSCAFG00020008920	LSM10	97	65.546	Canis_lupus_dingo
ENSORLG00000009504	oscp1a	99	62.500	ENSCHIG00000009398	LSM10	98	62.500	Capra_hircus
ENSORLG00000009504	oscp1a	98	66.387	ENSCAPG00000012567	LSM10	97	66.387	Cavia_aperea
ENSORLG00000009504	oscp1a	98	66.387	ENSCPOG00000039302	LSM10	97	66.387	Cavia_porcellus
ENSORLG00000009504	oscp1a	98	65.254	ENSCCAG00000018913	-	96	65.254	Cebus_capucinus
ENSORLG00000009504	oscp1a	99	61.667	ENSCCAG00000008378	-	98	61.667	Cebus_capucinus
ENSORLG00000009504	oscp1a	96	65.517	ENSCATG00000006589	LSM10	94	65.517	Cercocebus_atys
ENSORLG00000009504	oscp1a	98	64.706	ENSCLAG00000008633	LSM10	97	64.706	Chinchilla_lanigera
ENSORLG00000009504	oscp1a	96	65.517	ENSCSAG00000000134	LSM10	94	65.517	Chlorocebus_sabaeus
ENSORLG00000009504	oscp1a	98	63.636	ENSCHOG00000008615	LSM10	97	63.636	Choloepus_hoffmanni
ENSORLG00000009504	oscp1a	80	30.928	ENSCSAVG00000001896	-	83	30.928	Ciona_savignyi
ENSORLG00000009504	oscp1a	96	65.517	ENSCANG00000019928	LSM10	94	65.517	Colobus_angolensis_palliatus
ENSORLG00000009504	oscp1a	97	67.521	ENSCGRG00001004317	-	96	67.521	Cricetulus_griseus_chok1gshd
ENSORLG00000009504	oscp1a	95	61.538	ENSCGRG00001022673	-	94	61.538	Cricetulus_griseus_chok1gshd
ENSORLG00000009504	oscp1a	95	61.538	ENSCGRG00000015514	-	94	61.538	Cricetulus_griseus_crigri
ENSORLG00000009504	oscp1a	97	67.521	ENSCGRG00000014935	-	96	67.521	Cricetulus_griseus_crigri
ENSORLG00000009504	oscp1a	96	81.034	ENSCSEG00000010374	oscp1a	78	81.034	Cynoglossus_semilaevis
ENSORLG00000009504	oscp1a	95	77.391	ENSCVAG00000001536	oscp1a	87	77.391	Cyprinodon_variegatus
ENSORLG00000009504	oscp1a	69	72.289	ENSDARG00000109563	CABZ01074453.1	96	72.289	Danio_rerio
ENSORLG00000009504	oscp1a	98	72.269	ENSDARG00000101222	oscp1a	98	72.269	Danio_rerio
ENSORLG00000009504	oscp1a	98	66.102	ENSDNOG00000036662	LSM10	96	66.102	Dasypus_novemcinctus
ENSORLG00000009504	oscp1a	97	67.521	ENSDORG00000007579	Lsm10	95	67.521	Dipodomys_ordii
ENSORLG00000009504	oscp1a	97	64.957	ENSETEG00000005703	LSM10	95	64.957	Echinops_telfairi
ENSORLG00000009504	oscp1a	97	49.573	ENSEBUG00000001312	oscp1a	96	49.573	Eptatretus_burgeri
ENSORLG00000009504	oscp1a	98	66.387	ENSEASG00005012194	LSM10	97	66.387	Equus_asinus_asinus
ENSORLG00000009504	oscp1a	98	66.387	ENSECAG00000005071	LSM10	97	66.387	Equus_caballus
ENSORLG00000009504	oscp1a	98	65.546	ENSEEUG00000012032	LSM10	97	65.546	Erinaceus_europaeus
ENSORLG00000009504	oscp1a	98	78.151	ENSELUG00000007452	oscp1a	98	78.151	Esox_lucius
ENSORLG00000009504	oscp1a	95	65.217	ENSFALG00000000851	LSM10	93	65.217	Ficedula_albicollis
ENSORLG00000009504	oscp1a	98	66.387	ENSFDAG00000021056	LSM10	97	66.387	Fukomys_damarensis
ENSORLG00000009504	oscp1a	89	78.899	ENSFHEG00000001058	oscp1a	94	78.899	Fundulus_heteroclitus
ENSORLG00000009504	oscp1a	93	71.429	ENSGMOG00000019832	oscp1a	94	71.429	Gadus_morhua
ENSORLG00000009504	oscp1a	95	67.826	ENSGALG00000002127	LSM10	93	67.826	Gallus_gallus
ENSORLG00000009504	oscp1a	85	69.903	ENSGAFG00000016445	oscp1a	84	69.903	Gambusia_affinis
ENSORLG00000009504	oscp1a	99	81.667	ENSGACG00000002329	oscp1a	98	81.667	Gasterosteus_aculeatus
ENSORLG00000009504	oscp1a	95	66.957	ENSGAGG00000024848	LSM10	93	66.957	Gopherus_agassizii
ENSORLG00000009504	oscp1a	98	65.254	ENSGGOG00000003556	LSM10	96	65.254	Gorilla_gorilla
ENSORLG00000009504	oscp1a	100	82.645	ENSHBUG00000001722	oscp1a	98	82.645	Haplochromis_burtoni
ENSORLG00000009504	oscp1a	98	64.706	ENSHGLG00000011625	LSM10	97	64.706	Heterocephalus_glaber_female
ENSORLG00000009504	oscp1a	98	64.706	ENSHGLG00100001769	LSM10	97	64.706	Heterocephalus_glaber_male
ENSORLG00000009504	oscp1a	88	70.755	ENSIPUG00000005808	oscp1a	92	70.755	Ictalurus_punctatus
ENSORLG00000009504	oscp1a	98	65.546	ENSSTOG00000000606	LSM10	97	65.546	Ictidomys_tridecemlineatus
ENSORLG00000009504	oscp1a	100	82.645	ENSKMAG00000012143	oscp1a	100	82.645	Kryptolebias_marmoratus
ENSORLG00000009504	oscp1a	94	83.333	ENSLBEG00000017764	oscp1a	93	83.333	Labrus_bergylta
ENSORLG00000009504	oscp1a	98	62.185	ENSLACG00000015904	LSM10	92	62.185	Latimeria_chalumnae
ENSORLG00000009504	oscp1a	95	72.174	ENSLOCG00000018277	oscp1a	94	72.174	Lepisosteus_oculatus
ENSORLG00000009504	oscp1a	97	64.957	ENSLAFG00000009600	LSM10	95	64.957	Loxodonta_africana
ENSORLG00000009504	oscp1a	96	65.517	ENSMFAG00000009115	LSM10	94	65.517	Macaca_fascicularis
ENSORLG00000009504	oscp1a	96	65.517	ENSMMUG00000017338	LSM10	94	65.517	Macaca_mulatta
ENSORLG00000009504	oscp1a	96	65.517	ENSMNEG00000020023	LSM10	94	65.517	Macaca_nemestrina
ENSORLG00000009504	oscp1a	96	65.517	ENSMLEG00000025150	LSM10	94	65.517	Mandrillus_leucophaeus
ENSORLG00000009504	oscp1a	99	79.167	ENSMAMG00000004427	oscp1a	98	79.167	Mastacembelus_armatus
ENSORLG00000009504	oscp1a	100	81.818	ENSMZEG00005026307	oscp1a	98	81.818	Maylandia_zebra
ENSORLG00000009504	oscp1a	95	66.957	ENSMGAG00000015707	LSM10	93	66.957	Meleagris_gallopavo
ENSORLG00000009504	oscp1a	97	67.521	ENSMAUG00000016624	Lsm10	96	67.521	Mesocricetus_auratus
ENSORLG00000009504	oscp1a	98	66.102	ENSMOCG00000021943	Lsm10	97	66.102	Microtus_ochrogaster
ENSORLG00000009504	oscp1a	94	84.211	ENSMMOG00000013597	oscp1a	85	84.211	Mola_mola
ENSORLG00000009504	oscp1a	98	70.588	ENSMODG00000023328	LSM10	97	70.588	Monodelphis_domestica
ENSORLG00000009504	oscp1a	98	65.254	MGP_CAROLIEiJ_G0026467	Lsm10	96	68.539	Mus_caroli
ENSORLG00000009504	oscp1a	98	65.254	ENSMUSG00000050188	Lsm10	96	68.539	Mus_musculus
ENSORLG00000009504	oscp1a	98	65.254	MGP_PahariEiJ_G0028798	Lsm10	96	68.539	Mus_pahari
ENSORLG00000009504	oscp1a	98	65.254	MGP_SPRETEiJ_G0027446	Lsm10	96	68.539	Mus_spretus
ENSORLG00000009504	oscp1a	98	65.546	ENSMPUG00000018593	LSM10	97	65.546	Mustela_putorius_furo
ENSORLG00000009504	oscp1a	98	65.546	ENSMLUG00000023895	LSM10	97	65.546	Myotis_lucifugus
ENSORLG00000009504	oscp1a	98	64.407	ENSNGAG00000015011	Lsm10	96	64.407	Nannospalax_galili
ENSORLG00000009504	oscp1a	99	83.333	ENSNBRG00000014306	oscp1a	98	83.333	Neolamprologus_brichardi
ENSORLG00000009504	oscp1a	98	65.254	ENSNLEG00000033754	LSM10	96	65.254	Nomascus_leucogenys
ENSORLG00000009504	oscp1a	98	70.588	ENSMEUG00000006313	LSM10	97	70.588	Notamacropus_eugenii
ENSORLG00000009504	oscp1a	97	64.957	ENSOPRG00000001699	LSM10	95	64.957	Ochotona_princeps
ENSORLG00000009504	oscp1a	98	64.706	ENSODEG00000019161	LSM10	97	64.706	Octodon_degus
ENSORLG00000009504	oscp1a	99	83.333	ENSONIG00000020904	oscp1a	98	83.333	Oreochromis_niloticus
ENSORLG00000009504	oscp1a	98	66.387	ENSOANG00000002066	LSM10	97	66.387	Ornithorhynchus_anatinus
ENSORLG00000009504	oscp1a	98	63.866	ENSOCUG00000005333	LSM10	97	63.866	Oryctolagus_cuniculus
ENSORLG00000009504	oscp1a	100	100.000	ENSORLG00020016201	oscp1a	100	100.000	Oryzias_latipes_hni
ENSORLG00000009504	oscp1a	100	97.521	ENSORLG00015007794	oscp1a	100	97.521	Oryzias_latipes_hsok
ENSORLG00000009504	oscp1a	98	66.387	ENSOGAG00000002653	LSM10	97	66.387	Otolemur_garnettii
ENSORLG00000009504	oscp1a	99	62.500	ENSOARG00000009596	LSM10	98	62.500	Ovis_aries
ENSORLG00000009504	oscp1a	98	65.254	ENSPPAG00000023465	LSM10	96	65.254	Pan_paniscus
ENSORLG00000009504	oscp1a	98	66.387	ENSPPRG00000014619	LSM10	97	66.387	Panthera_pardus
ENSORLG00000009504	oscp1a	98	66.387	ENSPTIG00000004613	LSM10	97	66.387	Panthera_tigris_altaica
ENSORLG00000009504	oscp1a	98	65.254	ENSPTRG00000000539	LSM10	96	65.254	Pan_troglodytes
ENSORLG00000009504	oscp1a	96	65.517	ENSPANG00000023172	LSM10	94	65.517	Papio_anubis
ENSORLG00000009504	oscp1a	95	72.174	ENSPKIG00000003728	oscp1a	93	72.174	Paramormyrops_kingsleyae
ENSORLG00000009504	oscp1a	98	64.706	ENSPSIG00000000590	LSM10	97	64.706	Pelodiscus_sinensis
ENSORLG00000009504	oscp1a	63	75.000	ENSPMGG00000015718	oscp1a	99	75.000	Periophthalmus_magnuspinnatus
ENSORLG00000009504	oscp1a	83	71.287	ENSPCIG00000014865	LSM10	74	71.287	Phascolarctos_cinereus
ENSORLG00000009504	oscp1a	93	77.679	ENSPFOG00000020490	oscp1a	95	77.679	Poecilia_formosa
ENSORLG00000009504	oscp1a	93	77.679	ENSPLAG00000016537	oscp1a	85	77.679	Poecilia_latipinna
ENSORLG00000009504	oscp1a	93	73.451	ENSPMEG00000000174	oscp1a	98	73.451	Poecilia_mexicana
ENSORLG00000009504	oscp1a	97	73.504	ENSPREG00000009899	oscp1a	89	73.504	Poecilia_reticulata
ENSORLG00000009504	oscp1a	98	65.254	ENSPPYG00000001539	LSM10	96	65.254	Pongo_abelii
ENSORLG00000009504	oscp1a	98	64.407	ENSPCAG00000002520	LSM10	97	64.407	Procavia_capensis
ENSORLG00000009504	oscp1a	98	66.387	ENSPVAG00000008644	LSM10	97	66.387	Pteropus_vampyrus
ENSORLG00000009504	oscp1a	100	82.645	ENSPNYG00000003138	oscp1a	98	82.645	Pundamilia_nyererei
ENSORLG00000009504	oscp1a	100	73.554	ENSPNAG00000028829	oscp1a	100	73.554	Pygocentrus_nattereri
ENSORLG00000009504	oscp1a	98	64.407	ENSRNOG00000025716	Lsm10	97	64.407	Rattus_norvegicus
ENSORLG00000009504	oscp1a	96	65.517	ENSRBIG00000001561	LSM10	94	65.517	Rhinopithecus_bieti
ENSORLG00000009504	oscp1a	96	65.517	ENSRROG00000011414	LSM10	94	65.517	Rhinopithecus_roxellana
ENSORLG00000009504	oscp1a	98	65.254	ENSSBOG00000036413	-	96	65.254	Saimiri_boliviensis_boliviensis
ENSORLG00000009504	oscp1a	98	70.588	ENSSHAG00000018056	LSM10	97	70.588	Sarcophilus_harrisii
ENSORLG00000009504	oscp1a	98	71.429	ENSSFOG00015019954	lsm10	98	71.429	Scleropages_formosus
ENSORLG00000009504	oscp1a	97	80.342	ENSSMAG00000001297	oscp1a	100	80.342	Scophthalmus_maximus
ENSORLG00000009504	oscp1a	98	77.119	ENSSDUG00000007090	oscp1a	96	77.119	Seriola_dumerili
ENSORLG00000009504	oscp1a	100	76.860	ENSSLDG00000000800	oscp1a	100	76.860	Seriola_lalandi_dorsalis
ENSORLG00000009504	oscp1a	87	68.571	ENSSARG00000004211	LSM10	97	65.289	Sorex_araneus
ENSORLG00000009504	oscp1a	100	78.512	ENSSPAG00000009229	oscp1a	100	78.512	Stegastes_partitus
ENSORLG00000009504	oscp1a	99	63.333	ENSSSCG00000038916	LSM10	98	63.333	Sus_scrofa
ENSORLG00000009504	oscp1a	98	64.706	ENSTGUG00000001602	-	98	64.706	Taeniopygia_guttata
ENSORLG00000009504	oscp1a	98	63.866	ENSTGUG00000001600	-	98	63.866	Taeniopygia_guttata
ENSORLG00000009504	oscp1a	98	76.471	ENSTRUG00000010531	oscp1a	96	76.471	Takifugu_rubripes
ENSORLG00000009504	oscp1a	96	66.379	ENSTBEG00000016674	LSM10	94	66.379	Tupaia_belangeri
ENSORLG00000009504	oscp1a	98	65.546	ENSUAMG00000020265	LSM10	97	65.546	Ursus_americanus
ENSORLG00000009504	oscp1a	98	65.546	ENSUMAG00000001438	LSM10	55	65.546	Ursus_maritimus
ENSORLG00000009504	oscp1a	98	65.546	ENSVVUG00000023209	LSM10	97	65.546	Vulpes_vulpes
ENSORLG00000009504	oscp1a	98	62.185	ENSXETG00000027631	lsm10	97	62.185	Xenopus_tropicalis
ENSORLG00000009504	oscp1a	93	74.107	ENSXCOG00000018776	oscp1a	72	72.174	Xiphophorus_couchianus
ENSORLG00000009504	oscp1a	89	74.074	ENSXMAG00000019963	oscp1a	86	74.074	Xiphophorus_maculatus