EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000009543 (Gene tree)
Gene ID: 101165078
Gene Symbol: thrap3b
Alias: -
Full Name: thyroid hormone receptor associated protein 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 15384 bases
Position: chr11:19839036-19854419
Accession: 101165078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000011965	THRAP3_BCLAF1	PF15440.6	4.3e-135	1	2
ENSORLP00000011965	THRAP3_BCLAF1	PF15440.6	4.3e-135	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000011966	-	5208	XM_011481117	ENSORLP00000011965	885 (aa)	XP_011479419	H2M0N9

Gene Model

Click here to download ENSORLG00000009543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000009543	thrap3b	93	36.648	ENSORLG00000014550	thrap3a	69	37.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009543	thrap3b	75	40.608	ENSAPOG00000024453	thrap3a	82	39.740	Acanthochromis_polyacanthus
ENSORLG00000009543	thrap3b	94	71.579	ENSAPOG00000001848	thrap3b	94	76.366	Acanthochromis_polyacanthus
ENSORLG00000009543	thrap3b	78	74.180	ENSACIG00000015331	thrap3b	94	74.584	Amphilophus_citrinellus
ENSORLG00000009543	thrap3b	75	41.184	ENSAOCG00000014738	thrap3a	80	40.526	Amphiprion_ocellaris
ENSORLG00000009543	thrap3b	94	72.079	ENSAOCG00000015572	thrap3b	93	75.743	Amphiprion_ocellaris
ENSORLG00000009543	thrap3b	94	74.911	ENSAPEG00000021862	thrap3b	93	75.505	Amphiprion_percula
ENSORLG00000009543	thrap3b	75	41.053	ENSAPEG00000005696	thrap3a	80	40.395	Amphiprion_percula
ENSORLG00000009543	thrap3b	94	72.222	ENSATEG00000006350	thrap3b	93	71.429	Anabas_testudineus
ENSORLG00000009543	thrap3b	93	38.703	ENSATEG00000009618	thrap3a	82	38.101	Anabas_testudineus
ENSORLG00000009543	thrap3b	94	38.895	ENSACLG00000027851	thrap3a	93	39.019	Astatotilapia_calliptera
ENSORLG00000009543	thrap3b	94	73.333	ENSACLG00000004763	thrap3b	93	76.422	Astatotilapia_calliptera
ENSORLG00000009543	thrap3b	94	46.499	ENSAMXG00000020877	thrap3b	99	47.787	Astyanax_mexicanus
ENSORLG00000009543	thrap3b	93	36.489	ENSAMXG00000001863	thrap3a	76	37.418	Astyanax_mexicanus
ENSORLG00000009543	thrap3b	94	67.536	ENSCSEG00000010392	thrap3b	94	68.452	Cynoglossus_semilaevis
ENSORLG00000009543	thrap3b	94	73.734	ENSCVAG00000001547	thrap3b	93	74.083	Cyprinodon_variegatus
ENSORLG00000009543	thrap3b	91	50.581	ENSDARG00000098228	thrap3b	99	46.398	Danio_rerio
ENSORLG00000009543	thrap3b	95	43.532	ENSELUG00000017733	thrap3a	98	42.083	Esox_lucius
ENSORLG00000009543	thrap3b	91	56.393	ENSELUG00000007499	thrap3b	92	55.518	Esox_lucius
ENSORLG00000009543	thrap3b	77	63.265	ENSFALG00000000840	THRAP3	50	62.245	Ficedula_albicollis
ENSORLG00000009543	thrap3b	94	72.792	ENSFHEG00000001051	thrap3b	93	71.665	Fundulus_heteroclitus
ENSORLG00000009543	thrap3b	90	34.817	ENSGAFG00000008649	thrap3a	65	37.194	Gambusia_affinis
ENSORLG00000009543	thrap3b	53	72.327	ENSGAFG00000007090	thrap3b	87	70.061	Gambusia_affinis
ENSORLG00000009543	thrap3b	94	61.222	ENSGACG00000002319	thrap3b	93	60.889	Gasterosteus_aculeatus
ENSORLG00000009543	thrap3b	94	39.001	ENSHBUG00000009602	thrap3a	94	39.387	Haplochromis_burtoni
ENSORLG00000009543	thrap3b	94	73.452	ENSHBUG00000001708	thrap3b	93	74.524	Haplochromis_burtoni
ENSORLG00000009543	thrap3b	94	68.329	ENSHCOG00000004098	thrap3b	94	68.070	Hippocampus_comes
ENSORLG00000009543	thrap3b	93	47.157	ENSIPUG00000005707	thrap3b	93	46.249	Ictalurus_punctatus
ENSORLG00000009543	thrap3b	94	74.359	ENSKMAG00000012105	thrap3b	93	73.709	Kryptolebias_marmoratus
ENSORLG00000009543	thrap3b	94	68.957	ENSLBEG00000017803	thrap3b	93	70.024	Labrus_bergylta
ENSORLG00000009543	thrap3b	73	39.777	ENSLBEG00000008813	thrap3a	69	41.131	Labrus_bergylta
ENSORLG00000009543	thrap3b	94	66.470	ENSMAMG00000004348	thrap3b	93	66.588	Mastacembelus_armatus
ENSORLG00000009543	thrap3b	94	72.524	ENSMZEG00005026309	thrap3b	93	76.303	Maylandia_zebra
ENSORLG00000009543	thrap3b	94	38.895	ENSMZEG00005007212	thrap3a	94	39.278	Maylandia_zebra
ENSORLG00000009543	thrap3b	78	69.044	ENSMMOG00000013594	thrap3b	83	69.472	Mola_mola
ENSORLG00000009543	thrap3b	91	35.050	ENSMMOG00000018587	thrap3a	66	39.620	Mola_mola
ENSORLG00000009543	thrap3b	67	56.667	ENSMALG00000011980	thrap3a	78	36.173	Monopterus_albus
ENSORLG00000009543	thrap3b	94	71.901	ENSMALG00000012582	thrap3b	93	70.602	Monopterus_albus
ENSORLG00000009543	thrap3b	98	38.730	ENSNBRG00000009991	thrap3a	98	38.125	Neolamprologus_brichardi
ENSORLG00000009543	thrap3b	78	71.633	ENSNBRG00000014237	thrap3b	97	74.078	Neolamprologus_brichardi
ENSORLG00000009543	thrap3b	92	38.853	ENSONIG00000016278	thrap3a	92	31.879	Oreochromis_niloticus
ENSORLG00000009543	thrap3b	78	72.453	ENSONIG00000013673	thrap3b	93	74.881	Oreochromis_niloticus
ENSORLG00000009543	thrap3b	93	36.161	ENSORLG00020019116	thrap3a	69	36.794	Oryzias_latipes_hni
ENSORLG00000009543	thrap3b	100	98.984	ENSORLG00020016319	thrap3b	100	98.984	Oryzias_latipes_hni
ENSORLG00000009543	thrap3b	100	99.209	ENSORLG00015007831	thrap3b	100	99.209	Oryzias_latipes_hsok
ENSORLG00000009543	thrap3b	93	35.906	ENSORLG00015004215	thrap3a	69	37.403	Oryzias_latipes_hsok
ENSORLG00000009543	thrap3b	94	93.277	ENSOMEG00000005716	thrap3b	94	93.277	Oryzias_melastigma
ENSORLG00000009543	thrap3b	71	37.805	ENSOMEG00000019164	thrap3a	74	52.778	Oryzias_melastigma
ENSORLG00000009543	thrap3b	73	48.626	ENSPKIG00000005150	thrap3a	96	46.237	Paramormyrops_kingsleyae
ENSORLG00000009543	thrap3b	92	50.000	ENSPMGG00000023429	thrap3b	81	84.211	Periophthalmus_magnuspinnatus
ENSORLG00000009543	thrap3b	94	73.784	ENSPFOG00000000525	thrap3b	94	72.328	Poecilia_formosa
ENSORLG00000009543	thrap3b	90	36.384	ENSPFOG00000013297	thrap3a	76	36.228	Poecilia_formosa
ENSORLG00000009543	thrap3b	94	73.903	ENSPLAG00000016521	thrap3b	94	72.447	Poecilia_latipinna
ENSORLG00000009543	thrap3b	90	36.728	ENSPLAG00000000635	thrap3a	76	36.575	Poecilia_latipinna
ENSORLG00000009543	thrap3b	90	36.457	ENSPMEG00000019022	thrap3a	63	38.562	Poecilia_mexicana
ENSORLG00000009543	thrap3b	94	72.857	ENSPMEG00000009021	thrap3b	94	72.706	Poecilia_mexicana
ENSORLG00000009543	thrap3b	94	75.445	ENSPREG00000009927	thrap3b	94	74.792	Poecilia_reticulata
ENSORLG00000009543	thrap3b	90	37.543	ENSPREG00000005816	thrap3a	63	39.444	Poecilia_reticulata
ENSORLG00000009543	thrap3b	94	69.405	ENSPNYG00000003062	thrap3b	93	68.690	Pundamilia_nyererei
ENSORLG00000009543	thrap3b	94	39.172	ENSPNYG00000013314	thrap3a	93	39.126	Pundamilia_nyererei
ENSORLG00000009543	thrap3b	93	48.526	ENSPNAG00000028762	thrap3b	96	48.249	Pygocentrus_nattereri
ENSORLG00000009543	thrap3b	78	45.581	ENSSFOG00015020057	thrap3	94	45.833	Scleropages_formosus
ENSORLG00000009543	thrap3b	94	70.444	ENSSMAG00000001259	thrap3b	93	71.995	Scophthalmus_maximus
ENSORLG00000009543	thrap3b	83	39.952	ENSSMAG00000003703	thrap3a	78	38.796	Scophthalmus_maximus
ENSORLG00000009543	thrap3b	96	39.140	ENSSDUG00000010132	thrap3a	72	46.667	Seriola_dumerili
ENSORLG00000009543	thrap3b	94	72.459	ENSSDUG00000007054	thrap3b	94	75.532	Seriola_dumerili
ENSORLG00000009543	thrap3b	93	39.502	ENSSLDG00000003306	thrap3a	72	46.667	Seriola_lalandi_dorsalis
ENSORLG00000009543	thrap3b	94	73.050	ENSSLDG00000009210	thrap3b	94	76.123	Seriola_lalandi_dorsalis
ENSORLG00000009543	thrap3b	77	40.803	ENSSPAG00000017651	thrap3a	82	39.820	Stegastes_partitus
ENSORLG00000009543	thrap3b	62	77.975	ENSSPAG00000009248	thrap3b	99	78.508	Stegastes_partitus
ENSORLG00000009543	thrap3b	94	63.314	ENSTRUG00000010336	thrap3b	93	65.993	Takifugu_rubripes
ENSORLG00000009543	thrap3b	97	36.749	ENSTRUG00000010702	thrap3a	65	39.274	Takifugu_rubripes
ENSORLG00000009543	thrap3b	94	56.863	ENSTNIG00000004582	thrap3b	93	57.017	Tetraodon_nigroviridis
ENSORLG00000009543	thrap3b	86	67.613	ENSXCOG00000018772	thrap3b	91	67.141	Xiphophorus_couchianus
ENSORLG00000009543	thrap3b	91	38.706	ENSXCOG00000001569	thrap3a	78	38.406	Xiphophorus_couchianus
ENSORLG00000009543	thrap3b	94	74.408	ENSXMAG00000017962	thrap3b	94	72.835	Xiphophorus_maculatus
ENSORLG00000009543	thrap3b	90	36.842	ENSXMAG00000014797	thrap3a	63	38.550	Xiphophorus_maculatus