EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000009592 (Gene tree)
Gene ID: 101162926
Gene Symbol: prpf6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 15921 bases
Position: chr7:15454633-15470553
Accession: 101162926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000012022	PRP1_N	PF06424.12	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000012023	-	4485	XM_004070505	ENSORLP00000012022	969 (aa)	XP_004070553	H2M0U5

Gene Model

Click here to download ENSORLG00000009592's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009592	prpf6	96	91.923	ENSG00000101161	PRPF6	100	91.923	Homo_sapiens
ENSORLG00000009592	prpf6	100	96.078	ENSAPOG00000010395	prpf6	100	96.078	Acanthochromis_polyacanthus
ENSORLG00000009592	prpf6	96	91.083	ENSAMEG00000001916	PRPF6	99	91.083	Ailuropoda_melanoleuca
ENSORLG00000009592	prpf6	100	96.078	ENSACIG00000019862	prpf6	100	96.078	Amphilophus_citrinellus
ENSORLG00000009592	prpf6	100	96.182	ENSAOCG00000012988	prpf6	100	96.182	Amphiprion_ocellaris
ENSORLG00000009592	prpf6	96	90.538	ENSAPEG00000008301	prpf6	100	90.753	Amphiprion_percula
ENSORLG00000009592	prpf6	100	95.459	ENSATEG00000005581	prpf6	100	95.459	Anabas_testudineus
ENSORLG00000009592	prpf6	96	92.349	ENSACAG00000006464	PRPF6	95	92.349	Anolis_carolinensis
ENSORLG00000009592	prpf6	96	92.136	ENSANAG00000012661	PRPF6	100	93.286	Aotus_nancymaae
ENSORLG00000009592	prpf6	100	96.698	ENSACLG00000025875	prpf6	100	96.698	Astatotilapia_calliptera
ENSORLG00000009592	prpf6	97	93.326	ENSAMXG00000001929	prpf6	100	91.803	Astyanax_mexicanus
ENSORLG00000009592	prpf6	96	92.030	ENSBTAG00000011656	PRPF6	100	92.030	Bos_taurus
ENSORLG00000009592	prpf6	96	92.136	ENSCJAG00000010616	PRPF6	100	92.136	Callithrix_jacchus
ENSORLG00000009592	prpf6	96	92.136	ENSCAFG00000013165	PRPF6	100	92.136	Canis_familiaris
ENSORLG00000009592	prpf6	96	92.136	ENSCAFG00020002050	PRPF6	100	92.136	Canis_lupus_dingo
ENSORLG00000009592	prpf6	96	92.030	ENSCHIG00000018187	PRPF6	100	92.030	Capra_hircus
ENSORLG00000009592	prpf6	96	92.136	ENSTSYG00000007814	PRPF6	100	92.136	Carlito_syrichta
ENSORLG00000009592	prpf6	93	91.385	ENSCAPG00000015077	PRPF6	100	90.949	Cavia_aperea
ENSORLG00000009592	prpf6	96	92.561	ENSCPOG00000007518	PRPF6	100	92.561	Cavia_porcellus
ENSORLG00000009592	prpf6	96	89.054	ENSCCAG00000024564	PRPF6	100	89.054	Cebus_capucinus
ENSORLG00000009592	prpf6	96	92.030	ENSCATG00000037473	PRPF6	100	92.030	Cercocebus_atys
ENSORLG00000009592	prpf6	96	88.735	ENSCLAG00000003854	PRPF6	100	88.735	Chinchilla_lanigera
ENSORLG00000009592	prpf6	96	87.434	ENSCSAG00000016742	PRPF6	100	87.434	Chlorocebus_sabaeus
ENSORLG00000009592	prpf6	81	77.886	ENSCHOG00000003315	-	98	77.686	Choloepus_hoffmanni
ENSORLG00000009592	prpf6	98	90.947	ENSCPBG00000013964	PRPF6	96	92.660	Chrysemys_picta_bellii
ENSORLG00000009592	prpf6	96	71.987	ENSCING00000008817	-	99	71.987	Ciona_intestinalis
ENSORLG00000009592	prpf6	96	91.817	ENSCANG00000038230	PRPF6	100	91.817	Colobus_angolensis_palliatus
ENSORLG00000009592	prpf6	96	92.561	ENSCGRG00001022666	Prpf6	100	92.561	Cricetulus_griseus_chok1gshd
ENSORLG00000009592	prpf6	96	91.075	ENSCSEG00000018561	prpf6	100	91.075	Cynoglossus_semilaevis
ENSORLG00000009592	prpf6	100	95.872	ENSCVAG00000010550	prpf6	100	95.872	Cyprinodon_variegatus
ENSORLG00000009592	prpf6	100	91.701	ENSDARG00000091367	prpf6	100	93.220	Danio_rerio
ENSORLG00000009592	prpf6	96	91.817	ENSDNOG00000040544	PRPF6	100	91.817	Dasypus_novemcinctus
ENSORLG00000009592	prpf6	87	92.056	ENSDORG00000005406	Prpf6	100	92.056	Dipodomys_ordii
ENSORLG00000009592	prpf6	96	72.043	FBgn0036828	CG6841	99	72.043	Drosophila_melanogaster
ENSORLG00000009592	prpf6	83	91.228	ENSETEG00000004447	PRPF6	85	91.228	Echinops_telfairi
ENSORLG00000009592	prpf6	96	86.667	ENSEBUG00000008835	prpf6	100	86.667	Eptatretus_burgeri
ENSORLG00000009592	prpf6	99	90.196	ENSEASG00005023115	PRPF6	100	92.242	Equus_asinus_asinus
ENSORLG00000009592	prpf6	96	87.991	ENSECAG00000013983	PRPF6	100	87.991	Equus_caballus
ENSORLG00000009592	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSORLG00000009592	prpf6	97	94.161	ENSELUG00000001945	prpf6	94	94.161	Esox_lucius
ENSORLG00000009592	prpf6	96	92.136	ENSFCAG00000001183	PRPF6	100	92.136	Felis_catus
ENSORLG00000009592	prpf6	98	84.194	ENSFALG00000006046	-	97	86.064	Ficedula_albicollis
ENSORLG00000009592	prpf6	96	92.381	ENSFALG00000010326	-	98	92.381	Ficedula_albicollis
ENSORLG00000009592	prpf6	96	91.180	ENSFDAG00000006451	PRPF6	100	92.177	Fukomys_damarensis
ENSORLG00000009592	prpf6	99	96.687	ENSFHEG00000000560	prpf6	99	96.687	Fundulus_heteroclitus
ENSORLG00000009592	prpf6	97	93.637	ENSGMOG00000015622	prpf6	99	93.637	Gadus_morhua
ENSORLG00000009592	prpf6	96	92.667	ENSGALG00000006001	PRPF6	100	92.667	Gallus_gallus
ENSORLG00000009592	prpf6	100	92.157	ENSGAFG00000021109	prpf6	100	92.157	Gambusia_affinis
ENSORLG00000009592	prpf6	97	95.233	ENSGACG00000002576	prpf6	100	95.233	Gasterosteus_aculeatus
ENSORLG00000009592	prpf6	98	90.956	ENSGAGG00000008653	PRPF6	96	92.553	Gopherus_agassizii
ENSORLG00000009592	prpf6	96	91.923	ENSGGOG00000016876	PRPF6	100	91.923	Gorilla_gorilla
ENSORLG00000009592	prpf6	100	96.698	ENSHBUG00000004496	prpf6	100	96.698	Haplochromis_burtoni
ENSORLG00000009592	prpf6	96	92.455	ENSHGLG00000009222	PRPF6	100	92.455	Heterocephalus_glaber_female
ENSORLG00000009592	prpf6	93	92.366	ENSHGLG00100016600	PRPF6	100	92.366	Heterocephalus_glaber_male
ENSORLG00000009592	prpf6	100	94.530	ENSHCOG00000011513	prpf6	100	94.530	Hippocampus_comes
ENSORLG00000009592	prpf6	100	91.581	ENSIPUG00000004912	prpf6	100	91.581	Ictalurus_punctatus
ENSORLG00000009592	prpf6	96	90.021	ENSSTOG00000002922	PRPF6	100	89.597	Ictidomys_tridecemlineatus
ENSORLG00000009592	prpf6	96	92.561	ENSJJAG00000000836	Prpf6	100	92.561	Jaculus_jaculus
ENSORLG00000009592	prpf6	100	96.491	ENSKMAG00000017800	prpf6	100	96.491	Kryptolebias_marmoratus
ENSORLG00000009592	prpf6	100	95.666	ENSLBEG00000012582	prpf6	100	95.666	Labrus_bergylta
ENSORLG00000009592	prpf6	98	91.979	ENSLOCG00000004827	prpf6	96	92.128	Lepisosteus_oculatus
ENSORLG00000009592	prpf6	96	91.817	ENSLAFG00000005272	PRPF6	100	91.817	Loxodonta_africana
ENSORLG00000009592	prpf6	96	91.817	ENSMFAG00000037542	PRPF6	100	91.817	Macaca_fascicularis
ENSORLG00000009592	prpf6	96	85.669	ENSMMUG00000015558	PRPF6	98	93.588	Macaca_mulatta
ENSORLG00000009592	prpf6	96	79.449	ENSMNEG00000045555	PRPF6	100	79.449	Macaca_nemestrina
ENSORLG00000009592	prpf6	100	95.459	ENSMAMG00000010718	prpf6	100	95.459	Mastacembelus_armatus
ENSORLG00000009592	prpf6	90	96.914	ENSMZEG00005026539	prpf6	100	96.914	Maylandia_zebra
ENSORLG00000009592	prpf6	97	96.908	ENSMZEG00005015261	-	100	96.908	Maylandia_zebra
ENSORLG00000009592	prpf6	93	92.803	ENSMGAG00000006634	PRPF6	100	92.803	Meleagris_gallopavo
ENSORLG00000009592	prpf6	96	92.561	ENSMAUG00000013969	Prpf6	100	92.561	Mesocricetus_auratus
ENSORLG00000009592	prpf6	84	91.484	ENSMICG00000017793	PRPF6	98	91.492	Microcebus_murinus
ENSORLG00000009592	prpf6	96	92.455	ENSMOCG00000001701	Prpf6	100	92.455	Microtus_ochrogaster
ENSORLG00000009592	prpf6	96	96.022	ENSMMOG00000020419	prpf6	100	96.022	Mola_mola
ENSORLG00000009592	prpf6	96	93.711	ENSMODG00000017051	PRPF6	99	93.711	Monodelphis_domestica
ENSORLG00000009592	prpf6	95	96.957	ENSMALG00000000089	prpf6	100	96.957	Monopterus_albus
ENSORLG00000009592	prpf6	96	86.291	MGP_CAROLIEiJ_G0024814	Prpf6	100	90.741	Mus_caroli
ENSORLG00000009592	prpf6	96	92.561	ENSMUSG00000002455	Prpf6	100	92.561	Mus_musculus
ENSORLG00000009592	prpf6	96	92.561	MGP_PahariEiJ_G0026262	Prpf6	100	92.561	Mus_pahari
ENSORLG00000009592	prpf6	96	92.561	MGP_SPRETEiJ_G0025741	Prpf6	100	92.561	Mus_spretus
ENSORLG00000009592	prpf6	88	92.588	ENSMPUG00000008673	PRPF6	99	92.014	Mustela_putorius_furo
ENSORLG00000009592	prpf6	96	92.667	ENSNGAG00000003365	Prpf6	100	92.667	Nannospalax_galili
ENSORLG00000009592	prpf6	100	96.801	ENSNBRG00000015025	prpf6	100	96.801	Neolamprologus_brichardi
ENSORLG00000009592	prpf6	96	91.817	ENSNLEG00000010208	PRPF6	100	91.817	Nomascus_leucogenys
ENSORLG00000009592	prpf6	96	83.936	ENSMEUG00000009824	-	90	84.190	Notamacropus_eugenii
ENSORLG00000009592	prpf6	96	86.716	ENSODEG00000004841	PRPF6	100	86.716	Octodon_degus
ENSORLG00000009592	prpf6	100	96.491	ENSONIG00000017406	prpf6	100	96.491	Oreochromis_niloticus
ENSORLG00000009592	prpf6	96	92.561	ENSOANG00000004920	PRPF6	100	92.561	Ornithorhynchus_anatinus
ENSORLG00000009592	prpf6	95	90.236	ENSOCUG00000014151	PRPF6	100	90.236	Oryctolagus_cuniculus
ENSORLG00000009592	prpf6	100	99.897	ENSORLG00020001458	prpf6	100	99.897	Oryzias_latipes_hni
ENSORLG00000009592	prpf6	100	99.897	ENSORLG00015018762	prpf6	100	99.897	Oryzias_latipes_hsok
ENSORLG00000009592	prpf6	100	98.658	ENSOMEG00000012174	prpf6	100	98.658	Oryzias_melastigma
ENSORLG00000009592	prpf6	96	85.244	ENSOGAG00000007573	PRPF6	100	85.244	Otolemur_garnettii
ENSORLG00000009592	prpf6	96	91.605	ENSOARG00000008776	PRPF6	99	91.605	Ovis_aries
ENSORLG00000009592	prpf6	96	91.923	ENSPPAG00000008686	PRPF6	100	91.923	Pan_paniscus
ENSORLG00000009592	prpf6	96	92.136	ENSPPRG00000008497	PRPF6	100	92.136	Panthera_pardus
ENSORLG00000009592	prpf6	93	92.039	ENSPTIG00000011184	PRPF6	97	92.039	Panthera_tigris_altaica
ENSORLG00000009592	prpf6	96	91.923	ENSPTRG00000013765	PRPF6	100	91.923	Pan_troglodytes
ENSORLG00000009592	prpf6	96	91.605	ENSPANG00000024135	PRPF6	100	91.605	Papio_anubis
ENSORLG00000009592	prpf6	98	92.620	ENSPKIG00000005627	prpf6	99	94.255	Paramormyrops_kingsleyae
ENSORLG00000009592	prpf6	90	92.177	ENSPSIG00000007717	PRPF6	100	92.177	Pelodiscus_sinensis
ENSORLG00000009592	prpf6	100	93.196	ENSPMGG00000008925	prpf6	100	92.474	Periophthalmus_magnuspinnatus
ENSORLG00000009592	prpf6	96	92.561	ENSPEMG00000016036	Prpf6	100	92.561	Peromyscus_maniculatus_bairdii
ENSORLG00000009592	prpf6	98	87.070	ENSPMAG00000006144	prpf6	99	88.486	Petromyzon_marinus
ENSORLG00000009592	prpf6	96	92.880	ENSPCIG00000017909	PRPF6	100	92.880	Phascolarctos_cinereus
ENSORLG00000009592	prpf6	100	95.706	ENSPFOG00000006431	prpf6	99	95.706	Poecilia_formosa
ENSORLG00000009592	prpf6	100	96.491	ENSPLAG00000005974	prpf6	100	96.491	Poecilia_latipinna
ENSORLG00000009592	prpf6	100	96.698	ENSPMEG00000009977	prpf6	100	96.698	Poecilia_mexicana
ENSORLG00000009592	prpf6	100	96.904	ENSPREG00000017993	prpf6	95	96.904	Poecilia_reticulata
ENSORLG00000009592	prpf6	96	91.392	ENSPPYG00000011256	PRPF6	100	91.392	Pongo_abelii
ENSORLG00000009592	prpf6	91	94.444	ENSPCAG00000006536	PRPF6	88	94.444	Procavia_capensis
ENSORLG00000009592	prpf6	96	91.711	ENSPCOG00000016881	PRPF6	100	91.711	Propithecus_coquereli
ENSORLG00000009592	prpf6	96	86.079	ENSPVAG00000014316	PRPF6	100	86.079	Pteropus_vampyrus
ENSORLG00000009592	prpf6	100	82.752	ENSPNYG00000001939	prpf6	100	82.752	Pundamilia_nyererei
ENSORLG00000009592	prpf6	97	94.280	ENSPNAG00000015606	prpf6	100	92.418	Pygocentrus_nattereri
ENSORLG00000009592	prpf6	96	92.455	ENSRNOG00000051498	Prpf6	100	92.455	Rattus_norvegicus
ENSORLG00000009592	prpf6	96	91.817	ENSRBIG00000043613	PRPF6	100	91.817	Rhinopithecus_bieti
ENSORLG00000009592	prpf6	96	88.783	ENSRROG00000040969	PRPF6	98	92.215	Rhinopithecus_roxellana
ENSORLG00000009592	prpf6	87	89.027	ENSSBOG00000020632	PRPF6	93	87.543	Saimiri_boliviensis_boliviensis
ENSORLG00000009592	prpf6	96	92.880	ENSSHAG00000016810	PRPF6	100	92.880	Sarcophilus_harrisii
ENSORLG00000009592	prpf6	95	93.978	ENSSFOG00015020859	prpf6	100	93.978	Scleropages_formosus
ENSORLG00000009592	prpf6	100	94.840	ENSSMAG00000008112	prpf6	100	94.840	Scophthalmus_maximus
ENSORLG00000009592	prpf6	100	95.562	ENSSDUG00000016142	prpf6	100	95.562	Seriola_dumerili
ENSORLG00000009592	prpf6	100	95.562	ENSSLDG00000025283	prpf6	99	95.562	Seriola_lalandi_dorsalis
ENSORLG00000009592	prpf6	90	91.487	ENSSPUG00000018260	PRPF6	100	91.487	Sphenodon_punctatus
ENSORLG00000009592	prpf6	100	96.078	ENSSPAG00000015850	prpf6	100	96.078	Stegastes_partitus
ENSORLG00000009592	prpf6	96	91.711	ENSSSCG00000029119	PRPF6	100	91.270	Sus_scrofa
ENSORLG00000009592	prpf6	96	92.479	ENSTGUG00000007221	PRPF6	100	92.479	Taeniopygia_guttata
ENSORLG00000009592	prpf6	100	94.221	ENSTRUG00000002920	prpf6	100	94.221	Takifugu_rubripes
ENSORLG00000009592	prpf6	96	89.054	ENSTNIG00000017873	prpf6	100	89.054	Tetraodon_nigroviridis
ENSORLG00000009592	prpf6	85	92.222	ENSTBEG00000005348	PRPF6	85	92.222	Tupaia_belangeri
ENSORLG00000009592	prpf6	96	91.817	ENSTTRG00000013068	PRPF6	100	91.817	Tursiops_truncatus
ENSORLG00000009592	prpf6	94	90.543	ENSUMAG00000021631	PRPF6	98	90.543	Ursus_maritimus
ENSORLG00000009592	prpf6	96	92.136	ENSVVUG00000014948	PRPF6	100	92.136	Vulpes_vulpes
ENSORLG00000009592	prpf6	98	90.531	ENSXETG00000012054	prpf6	97	91.915	Xenopus_tropicalis
ENSORLG00000009592	prpf6	100	96.388	ENSXCOG00000008082	prpf6	100	96.388	Xiphophorus_couchianus
ENSORLG00000009592	prpf6	100	96.285	ENSXMAG00000015581	prpf6	100	96.285	Xiphophorus_maculatus