EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000009636 (Gene tree)
Gene ID: 101167786
Gene Symbol: rbm28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8831 bases
Position: chr6:20011553-20020383
Accession: 101167786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000012079	RRM_1	PF00076.22	1.1e-57	1	3
ENSORLP00000012079	RRM_1	PF00076.22	1.1e-57	2	3
ENSORLP00000012079	RRM_1	PF00076.22	1.1e-57	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000012080	-	5122	XM_023955911	ENSORLP00000012079	754 (aa)	XP_023811679	H2M100

Gene Model

Click here to download ENSORLG00000009636's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009636's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009636	rbm28	69	67.500	ENSG00000106344	RBM28	100	49.029	Homo_sapiens
ENSORLG00000009636	rbm28	57	74.318	ENSAPOG00000015512	rbm28	99	68.840	Acanthochromis_polyacanthus
ENSORLG00000009636	rbm28	97	58.621	ENSAMEG00000004776	RBM28	88	58.442	Ailuropoda_melanoleuca
ENSORLG00000009636	rbm28	56	72.922	ENSACIG00000023153	rbm28	91	72.922	Amphilophus_citrinellus
ENSORLG00000009636	rbm28	57	74.318	ENSAOCG00000000462	rbm28	99	69.961	Amphiprion_ocellaris
ENSORLG00000009636	rbm28	57	74.091	ENSAPEG00000012996	rbm28	99	69.311	Amphiprion_percula
ENSORLG00000009636	rbm28	59	66.667	ENSATEG00000001672	rbm28	99	63.970	Anabas_testudineus
ENSORLG00000009636	rbm28	99	51.232	ENSANAG00000033922	RBM28	99	72.222	Aotus_nancymaae
ENSORLG00000009636	rbm28	99	65.847	ENSACLG00000025024	rbm28	99	67.273	Astatotilapia_calliptera
ENSORLG00000009636	rbm28	58	60.820	ENSAMXG00000000763	rbm28	99	61.312	Astyanax_mexicanus
ENSORLG00000009636	rbm28	63	67.500	ENSBTAG00000017001	RBM28	99	67.500	Bos_taurus
ENSORLG00000009636	rbm28	70	67.500	ENSCJAG00000017731	RBM28	77	67.500	Callithrix_jacchus
ENSORLG00000009636	rbm28	64	53.753	ENSCAFG00000001667	RBM28	99	50.572	Canis_familiaris
ENSORLG00000009636	rbm28	64	53.753	ENSCAFG00020021648	RBM28	99	50.572	Canis_lupus_dingo
ENSORLG00000009636	rbm28	63	53.556	ENSCHIG00000014146	RBM28	59	55.357	Capra_hircus
ENSORLG00000009636	rbm28	66	65.000	ENSTSYG00000002892	RBM28	79	65.000	Carlito_syrichta
ENSORLG00000009636	rbm28	77	42.353	ENSCAPG00000013218	RBM28	93	40.789	Cavia_aperea
ENSORLG00000009636	rbm28	99	51.355	ENSCPOG00000006253	RBM28	58	55.856	Cavia_porcellus
ENSORLG00000009636	rbm28	68	67.500	ENSCCAG00000035105	RBM28	77	67.500	Cebus_capucinus
ENSORLG00000009636	rbm28	69	67.500	ENSCATG00000040497	RBM28	77	67.500	Cercocebus_atys
ENSORLG00000009636	rbm28	62	54.603	ENSCLAG00000003707	RBM28	99	47.730	Chinchilla_lanigera
ENSORLG00000009636	rbm28	64	53.074	ENSCSAG00000010161	RBM28	58	55.530	Chlorocebus_sabaeus
ENSORLG00000009636	rbm28	56	53.226	ENSCHOG00000001994	-	63	53.226	Choloepus_hoffmanni
ENSORLG00000009636	rbm28	69	38.816	ENSCING00000009238	-	52	42.895	Ciona_intestinalis
ENSORLG00000009636	rbm28	57	67.500	ENSCANG00000038397	RBM28	73	62.264	Colobus_angolensis_palliatus
ENSORLG00000009636	rbm28	65	53.049	ENSCGRG00001021278	Rbm28	56	56.306	Cricetulus_griseus_chok1gshd
ENSORLG00000009636	rbm28	99	51.693	ENSCGRG00000005098	Rbm28	58	56.306	Cricetulus_griseus_crigri
ENSORLG00000009636	rbm28	99	62.663	ENSCSEG00000004212	rbm28	99	61.658	Cynoglossus_semilaevis
ENSORLG00000009636	rbm28	59	73.673	ENSCVAG00000010493	rbm28	100	64.653	Cyprinodon_variegatus
ENSORLG00000009636	rbm28	99	50.329	ENSDARG00000025332	rbm28	99	51.163	Danio_rerio
ENSORLG00000009636	rbm28	99	50.847	ENSDNOG00000001124	RBM28	99	50.850	Dasypus_novemcinctus
ENSORLG00000009636	rbm28	64	51.521	ENSDORG00000004184	Rbm28	86	54.933	Dipodomys_ordii
ENSORLG00000009636	rbm28	64	38.683	FBgn0260456	CG4806	93	33.533	Drosophila_melanogaster
ENSORLG00000009636	rbm28	83	46.114	ENSEBUG00000004419	rbm28	88	45.833	Eptatretus_burgeri
ENSORLG00000009636	rbm28	64	53.170	ENSEASG00005008528	RBM28	99	50.000	Equus_asinus_asinus
ENSORLG00000009636	rbm28	64	52.834	ENSECAG00000007745	RBM28	99	50.190	Equus_caballus
ENSORLG00000009636	rbm28	99	49.677	ENSEEUG00000002389	RBM28	58	52.360	Erinaceus_europaeus
ENSORLG00000009636	rbm28	99	57.962	ENSELUG00000020602	rbm28	59	64.301	Esox_lucius
ENSORLG00000009636	rbm28	70	67.500	ENSFCAG00000000946	RBM28	99	67.500	Felis_catus
ENSORLG00000009636	rbm28	99	51.232	ENSFDAG00000010169	RBM28	99	50.000	Fukomys_damarensis
ENSORLG00000009636	rbm28	87	62.037	ENSGMOG00000007091	rbm28	99	56.551	Gadus_morhua
ENSORLG00000009636	rbm28	59	70.759	ENSGAFG00000004802	rbm28	98	70.796	Gambusia_affinis
ENSORLG00000009636	rbm28	58	69.037	ENSGACG00000012612	rbm28	99	63.793	Gasterosteus_aculeatus
ENSORLG00000009636	rbm28	82	56.122	ENSGAGG00000008873	RBM28	87	60.104	Gopherus_agassizii
ENSORLG00000009636	rbm28	64	52.361	ENSGGOG00000004644	RBM28	59	55.530	Gorilla_gorilla
ENSORLG00000009636	rbm28	94	66.118	ENSHBUG00000009611	rbm28	98	67.541	Haplochromis_burtoni
ENSORLG00000009636	rbm28	99	50.911	ENSHGLG00000005409	RBM28	59	56.109	Heterocephalus_glaber_female
ENSORLG00000009636	rbm28	99	50.911	ENSHGLG00100016458	RBM28	59	56.109	Heterocephalus_glaber_male
ENSORLG00000009636	rbm28	82	54.974	ENSHCOG00000010597	rbm28	84	54.688	Hippocampus_comes
ENSORLG00000009636	rbm28	56	50.469	ENSIPUG00000007103	rbm28	81	50.824	Ictalurus_punctatus
ENSORLG00000009636	rbm28	99	50.710	ENSSTOG00000002169	RBM28	57	54.709	Ictidomys_tridecemlineatus
ENSORLG00000009636	rbm28	56	55.399	ENSJJAG00000022400	Rbm28	59	55.399	Jaculus_jaculus
ENSORLG00000009636	rbm28	59	72.321	ENSKMAG00000013348	rbm28	100	65.966	Kryptolebias_marmoratus
ENSORLG00000009636	rbm28	59	69.144	ENSLBEG00000012998	rbm28	100	64.994	Labrus_bergylta
ENSORLG00000009636	rbm28	73	50.352	ENSLACG00000010485	-	99	48.129	Latimeria_chalumnae
ENSORLG00000009636	rbm28	99	61.340	ENSLOCG00000015541	rbm28	76	60.309	Lepisosteus_oculatus
ENSORLG00000009636	rbm28	99	50.064	ENSLAFG00000010717	RBM28	58	55.850	Loxodonta_africana
ENSORLG00000009636	rbm28	69	67.500	ENSMFAG00000031036	RBM28	77	67.500	Macaca_fascicularis
ENSORLG00000009636	rbm28	69	67.500	ENSMMUG00000007250	RBM28	77	67.500	Macaca_mulatta
ENSORLG00000009636	rbm28	99	50.845	ENSMNEG00000036970	RBM28	99	51.295	Macaca_nemestrina
ENSORLG00000009636	rbm28	99	65.104	ENSMAMG00000008525	rbm28	99	64.020	Mastacembelus_armatus
ENSORLG00000009636	rbm28	93	64.722	ENSMZEG00005019625	rbm28	99	66.248	Maylandia_zebra
ENSORLG00000009636	rbm28	65	52.333	ENSMAUG00000002263	Rbm28	99	51.210	Mesocricetus_auratus
ENSORLG00000009636	rbm28	65	52.953	ENSMICG00000000107	RBM28	61	55.506	Microcebus_murinus
ENSORLG00000009636	rbm28	99	51.383	ENSMOCG00000014615	Rbm28	99	50.381	Microtus_ochrogaster
ENSORLG00000009636	rbm28	58	65.446	ENSMMOG00000008600	rbm28	90	65.446	Mola_mola
ENSORLG00000009636	rbm28	99	48.934	ENSMODG00000015151	RBM28	58	55.804	Monodelphis_domestica
ENSORLG00000009636	rbm28	59	70.222	ENSMALG00000006419	rbm28	99	63.718	Monopterus_albus
ENSORLG00000009636	rbm28	99	51.571	MGP_CAROLIEiJ_G0028162	Rbm28	99	50.317	Mus_caroli
ENSORLG00000009636	rbm28	99	51.900	ENSMUSG00000029701	Rbm28	99	50.699	Mus_musculus
ENSORLG00000009636	rbm28	99	51.958	MGP_PahariEiJ_G0021920	Rbm28	99	50.758	Mus_pahari
ENSORLG00000009636	rbm28	99	51.507	MGP_SPRETEiJ_G0029162	Rbm28	99	50.191	Mus_spretus
ENSORLG00000009636	rbm28	64	55.263	ENSMPUG00000006511	RBM28	58	56.195	Mustela_putorius_furo
ENSORLG00000009636	rbm28	64	54.397	ENSMLUG00000002186	RBM28	58	55.556	Myotis_lucifugus
ENSORLG00000009636	rbm28	99	50.727	ENSNGAG00000006480	-	99	50.387	Nannospalax_galili
ENSORLG00000009636	rbm28	99	49.277	ENSNGAG00000017946	-	99	48.462	Nannospalax_galili
ENSORLG00000009636	rbm28	70	67.500	ENSNLEG00000012307	RBM28	77	67.500	Nomascus_leucogenys
ENSORLG00000009636	rbm28	82	58.683	ENSMEUG00000009611	RBM28	83	59.756	Notamacropus_eugenii
ENSORLG00000009636	rbm28	99	49.285	ENSODEG00000003213	-	57	52.584	Octodon_degus
ENSORLG00000009636	rbm28	72	58.152	ENSODEG00000013217	-	82	57.326	Octodon_degus
ENSORLG00000009636	rbm28	99	66.194	ENSONIG00000014924	rbm28	99	67.183	Oreochromis_niloticus
ENSORLG00000009636	rbm28	99	46.144	ENSOANG00000000815	-	59	47.672	Ornithorhynchus_anatinus
ENSORLG00000009636	rbm28	64	53.479	ENSOCUG00000003009	RBM28	58	55.315	Oryctolagus_cuniculus
ENSORLG00000009636	rbm28	100	97.351	ENSORLG00020002123	rbm28	100	97.351	Oryzias_latipes_hni
ENSORLG00000009636	rbm28	86	94.660	ENSORLG00015015030	rbm28	98	94.660	Oryzias_latipes_hsok
ENSORLG00000009636	rbm28	59	88.053	ENSOMEG00000007801	rbm28	99	84.314	Oryzias_melastigma
ENSORLG00000009636	rbm28	70	65.000	ENSOGAG00000006011	RBM28	79	55.556	Otolemur_garnettii
ENSORLG00000009636	rbm28	99	50.963	ENSOARG00000002547	RBM28	99	49.430	Ovis_aries
ENSORLG00000009636	rbm28	69	67.500	ENSPPAG00000041730	RBM28	99	49.248	Pan_paniscus
ENSORLG00000009636	rbm28	82	67.500	ENSPPRG00000004420	RBM28	99	67.500	Panthera_pardus
ENSORLG00000009636	rbm28	82	67.500	ENSPTIG00000008550	RBM28	99	67.500	Panthera_tigris_altaica
ENSORLG00000009636	rbm28	69	67.500	ENSPTRG00000019659	RBM28	99	49.373	Pan_troglodytes
ENSORLG00000009636	rbm28	69	67.500	ENSPANG00000022295	RBM28	79	55.506	Papio_anubis
ENSORLG00000009636	rbm28	100	53.117	ENSPKIG00000023453	rbm28	100	53.051	Paramormyrops_kingsleyae
ENSORLG00000009636	rbm28	85	68.075	ENSPMGG00000012840	rbm28	93	67.713	Periophthalmus_magnuspinnatus
ENSORLG00000009636	rbm28	65	52.738	ENSPEMG00000020673	Rbm28	99	49.550	Peromyscus_maniculatus_bairdii
ENSORLG00000009636	rbm28	99	50.456	ENSPCIG00000012810	RBM28	59	54.566	Phascolarctos_cinereus
ENSORLG00000009636	rbm28	59	70.575	ENSPFOG00000018209	rbm28	99	64.396	Poecilia_formosa
ENSORLG00000009636	rbm28	58	71.300	ENSPLAG00000016078	rbm28	96	64.829	Poecilia_latipinna
ENSORLG00000009636	rbm28	59	70.549	ENSPMEG00000004292	rbm28	99	64.898	Poecilia_mexicana
ENSORLG00000009636	rbm28	58	70.000	ENSPREG00000014287	rbm28	99	64.351	Poecilia_reticulata
ENSORLG00000009636	rbm28	64	52.361	ENSPPYG00000017975	RBM28	99	49.496	Pongo_abelii
ENSORLG00000009636	rbm28	73	51.404	ENSPCAG00000008223	RBM28	83	50.954	Procavia_capensis
ENSORLG00000009636	rbm28	70	67.500	ENSPCOG00000016797	RBM28	79	55.088	Propithecus_coquereli
ENSORLG00000009636	rbm28	76	61.215	ENSPVAG00000005443	RBM28	73	62.687	Pteropus_vampyrus
ENSORLG00000009636	rbm28	99	66.753	ENSPNYG00000014003	rbm28	99	67.403	Pundamilia_nyererei
ENSORLG00000009636	rbm28	99	50.852	ENSRNOG00000005468	Rbm28	58	55.405	Rattus_norvegicus
ENSORLG00000009636	rbm28	69	67.500	ENSRBIG00000033990	RBM28	77	67.500	Rhinopithecus_bieti
ENSORLG00000009636	rbm28	69	67.500	ENSRROG00000040747	RBM28	77	67.500	Rhinopithecus_roxellana
ENSORLG00000009636	rbm28	85	46.875	ENSSBOG00000012308	RBM28	73	56.132	Saimiri_boliviensis_boliviensis
ENSORLG00000009636	rbm28	96	48.095	ENSSHAG00000017017	RBM28	60	54.897	Sarcophilus_harrisii
ENSORLG00000009636	rbm28	99	53.947	ENSSFOG00015001231	rbm28	99	54.605	Scleropages_formosus
ENSORLG00000009636	rbm28	59	67.333	ENSSMAG00000003885	rbm28	91	67.333	Scophthalmus_maximus
ENSORLG00000009636	rbm28	59	75.276	ENSSDUG00000014270	rbm28	88	75.276	Seriola_dumerili
ENSORLG00000009636	rbm28	59	74.779	ENSSLDG00000020099	rbm28	99	66.408	Seriola_lalandi_dorsalis
ENSORLG00000009636	rbm28	73	59.946	ENSSARG00000008303	RBM28	80	59.296	Sorex_araneus
ENSORLG00000009636	rbm28	67	61.765	ENSSPUG00000000838	RBM28	80	61.765	Sphenodon_punctatus
ENSORLG00000009636	rbm28	58	72.460	ENSSPAG00000023305	rbm28	99	65.247	Stegastes_partitus
ENSORLG00000009636	rbm28	99	50.914	ENSSSCG00000031847	RBM28	99	49.559	Sus_scrofa
ENSORLG00000009636	rbm28	99	61.211	ENSTRUG00000013311	rbm28	99	61.133	Takifugu_rubripes
ENSORLG00000009636	rbm28	99	57.506	ENSTNIG00000017962	rbm28	60	65.427	Tetraodon_nigroviridis
ENSORLG00000009636	rbm28	68	56.090	ENSTBEG00000012749	RBM28	69	56.037	Tupaia_belangeri
ENSORLG00000009636	rbm28	62	54.316	ENSTTRG00000013647	RBM28	59	55.778	Tursiops_truncatus
ENSORLG00000009636	rbm28	99	49.482	ENSUAMG00000006949	RBM28	99	45.949	Ursus_americanus
ENSORLG00000009636	rbm28	64	53.550	ENSUMAG00000005997	RBM28	99	49.811	Ursus_maritimus
ENSORLG00000009636	rbm28	85	48.148	ENSVPAG00000008304	RBM28	85	45.685	Vicugna_pacos
ENSORLG00000009636	rbm28	64	53.753	ENSVVUG00000007270	RBM28	58	55.876	Vulpes_vulpes
ENSORLG00000009636	rbm28	65	49.008	ENSXETG00000009271	rbm28	99	45.096	Xenopus_tropicalis
ENSORLG00000009636	rbm28	64	62.708	ENSXCOG00000020357	rbm28	91	68.265	Xiphophorus_couchianus
ENSORLG00000009636	rbm28	58	70.880	ENSXMAG00000004415	rbm28	99	64.660	Xiphophorus_maculatus